EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000002148 (Gene tree)
Gene ID: 108244498
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 4955 bases
Position: chrLWHD01000143.1:663860-668814
Accession: 108244498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002819	zf-C2H2	PF00096.26	1.2e-23	1	5
ENSKMAP00000002819	zf-C2H2	PF00096.26	1.2e-23	2	5
ENSKMAP00000002819	zf-C2H2	PF00096.26	1.2e-23	3	5
ENSKMAP00000002819	zf-C2H2	PF00096.26	1.2e-23	4	5
ENSKMAP00000002819	zf-C2H2	PF00096.26	1.2e-23	5	5
ENSKMAP00000002819	zf-met	PF12874.7	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002875	-	1676	XM_017430743	ENSKMAP00000002819	379 (aa)	XP_017286232	UPI0007F89601

Gene Model

Click here to download ENSKMAG00000002148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000002148	gfi1aa	65	48.980	ENSKMAG00000006231	-	94	46.429
ENSKMAG00000002148	gfi1aa	64	41.781	ENSKMAG00000021184	-	90	41.781
ENSKMAG00000002148	gfi1aa	58	44.366	ENSKMAG00000001357	-	78	44.366
ENSKMAG00000002148	gfi1aa	86	44.578	ENSKMAG00000002093	-	81	44.578
ENSKMAG00000002148	gfi1aa	51	36.283	ENSKMAG00000011689	zic1	50	37.168
ENSKMAG00000002148	gfi1aa	60	45.890	ENSKMAG00000003940	-	90	45.614
ENSKMAG00000002148	gfi1aa	64	41.463	ENSKMAG00000006773	-	73	43.243
ENSKMAG00000002148	gfi1aa	52	40.351	ENSKMAG00000001192	-	79	40.351
ENSKMAG00000002148	gfi1aa	66	43.976	ENSKMAG00000019130	-	85	43.976
ENSKMAG00000002148	gfi1aa	54	43.089	ENSKMAG00000020025	-	85	43.089
ENSKMAG00000002148	gfi1aa	64	42.500	ENSKMAG00000003766	-	89	48.837
ENSKMAG00000002148	gfi1aa	50	39.884	ENSKMAG00000000529	-	71	40.506
ENSKMAG00000002148	gfi1aa	51	45.679	ENSKMAG00000021817	znf236	55	45.679
ENSKMAG00000002148	gfi1aa	100	62.916	ENSKMAG00000003810	gfi1ab	100	62.660
ENSKMAG00000002148	gfi1aa	54	40.828	ENSKMAG00000000073	-	77	42.236
ENSKMAG00000002148	gfi1aa	64	45.882	ENSKMAG00000008262	-	71	45.882
ENSKMAG00000002148	gfi1aa	50	39.286	ENSKMAG00000003186	-	89	39.286
ENSKMAG00000002148	gfi1aa	66	41.071	ENSKMAG00000013863	-	65	41.071
ENSKMAG00000002148	gfi1aa	69	41.667	ENSKMAG00000001996	-	89	41.538
ENSKMAG00000002148	gfi1aa	54	41.463	ENSKMAG00000013663	prdm5	81	41.463
ENSKMAG00000002148	gfi1aa	71	42.353	ENSKMAG00000001171	-	94	42.353
ENSKMAG00000002148	gfi1aa	70	38.806	ENSKMAG00000009648	-	83	40.476
ENSKMAG00000002148	gfi1aa	66	44.767	ENSKMAG00000000371	-	71	44.767
ENSKMAG00000002148	gfi1aa	59	37.838	ENSKMAG00000014184	-	64	37.427
ENSKMAG00000002148	gfi1aa	50	46.154	ENSKMAG00000000718	-	99	42.857
ENSKMAG00000002148	gfi1aa	60	39.450	ENSKMAG00000004290	-	66	39.450
ENSKMAG00000002148	gfi1aa	64	45.238	ENSKMAG00000011111	-	98	45.238
ENSKMAG00000002148	gfi1aa	53	46.400	ENSKMAG00000003121	-	94	46.400
ENSKMAG00000002148	gfi1aa	55	41.860	ENSKMAG00000018636	-	76	40.828
ENSKMAG00000002148	gfi1aa	52	45.890	ENSKMAG00000016333	-	93	45.890
ENSKMAG00000002148	gfi1aa	64	42.262	ENSKMAG00000012202	-	74	42.262
ENSKMAG00000002148	gfi1aa	50	41.618	ENSKMAG00000012934	-	84	41.618
ENSKMAG00000002148	gfi1aa	50	43.421	ENSKMAG00000002583	-	86	55.172
ENSKMAG00000002148	gfi1aa	56	40.854	ENSKMAG00000013290	-	96	42.177
ENSKMAG00000002148	gfi1aa	55	44.375	ENSKMAG00000000597	-	98	44.375
ENSKMAG00000002148	gfi1aa	64	42.262	ENSKMAG00000018648	-	62	42.262
ENSKMAG00000002148	gfi1aa	64	42.342	ENSKMAG00000008316	-	85	47.959
ENSKMAG00000002148	gfi1aa	52	41.071	ENSKMAG00000002022	-	65	41.071
ENSKMAG00000002148	gfi1aa	68	45.000	ENSKMAG00000000689	-	93	42.500
ENSKMAG00000002148	gfi1aa	66	40.000	ENSKMAG00000000688	-	98	40.000
ENSKMAG00000002148	gfi1aa	53	43.448	ENSKMAG00000006392	-	56	43.448
ENSKMAG00000002148	gfi1aa	50	42.945	ENSKMAG00000002606	-	85	42.945
ENSKMAG00000002148	gfi1aa	100	50.130	ENSKMAG00000016047	gfi1b	54	86.628
ENSKMAG00000002148	gfi1aa	52	53.247	ENSKMAG00000001084	-	83	40.171
ENSKMAG00000002148	gfi1aa	52	43.210	ENSKMAG00000009979	-	60	44.860
ENSKMAG00000002148	gfi1aa	52	45.570	ENSKMAG00000020046	-	74	45.570
ENSKMAG00000002148	gfi1aa	52	37.500	ENSKMAG00000000462	-	97	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002148	gfi1aa	100	80.645	ENSAPOG00000005043	gfi1aa	100	80.702	Acanthochromis_polyacanthus
ENSKMAG00000002148	gfi1aa	100	76.456	ENSACIG00000021378	gfi1aa	100	76.203	Amphilophus_citrinellus
ENSKMAG00000002148	gfi1aa	100	79.653	ENSAOCG00000022957	gfi1aa	100	79.449	Amphiprion_ocellaris
ENSKMAG00000002148	gfi1aa	100	79.901	ENSAPEG00000014539	gfi1aa	100	79.699	Amphiprion_percula
ENSKMAG00000002148	gfi1aa	100	76.750	ENSATEG00000019026	gfi1aa	99	82.051	Anabas_testudineus
ENSKMAG00000002148	gfi1aa	100	77.638	ENSACLG00000008641	gfi1aa	100	77.387	Astatotilapia_calliptera
ENSKMAG00000002148	gfi1aa	100	64.541	ENSDARG00000020746	gfi1aa	100	63.427	Danio_rerio
ENSKMAG00000002148	gfi1aa	100	76.962	ENSHBUG00000007389	gfi1aa	100	76.709	Haplochromis_burtoni
ENSKMAG00000002148	gfi1aa	100	74.177	ENSLBEG00000006603	gfi1aa	100	74.177	Labrus_bergylta
ENSKMAG00000002148	gfi1aa	100	73.990	ENSMAMG00000004896	gfi1aa	100	74.242	Mastacembelus_armatus
ENSKMAG00000002148	gfi1aa	100	77.638	ENSMZEG00005004578	gfi1aa	100	77.387	Maylandia_zebra
ENSKMAG00000002148	gfi1aa	83	75.862	ENSMMOG00000006167	gfi1aa	100	75.862	Mola_mola
ENSKMAG00000002148	gfi1aa	100	77.387	ENSNBRG00000002673	gfi1aa	100	77.136	Neolamprologus_brichardi
ENSKMAG00000002148	gfi1aa	100	76.322	ENSPNYG00000002189	gfi1aa	100	76.322	Pundamilia_nyererei
ENSKMAG00000002148	gfi1aa	100	73.039	ENSSMAG00000006797	gfi1aa	100	73.515	Scophthalmus_maximus
ENSKMAG00000002148	gfi1aa	100	77.861	ENSSDUG00000011654	gfi1aa	100	77.861	Seriola_dumerili
ENSKMAG00000002148	gfi1aa	100	77.193	ENSSLDG00000016512	gfi1aa	100	76.942	Seriola_lalandi_dorsalis
ENSKMAG00000002148	gfi1aa	85	76.522	ENSSPAG00000000927	gfi1aa	94	76.540	Stegastes_partitus
ENSKMAG00000002148	gfi1aa	100	76.060	ENSTRUG00000004744	gfi1aa	100	75.810	Takifugu_rubripes