EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000002198 (Gene tree)
Gene ID: 108232393
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5866 bases
Position: chrLWHD01000016.1:1879761-1885626
Accession: 108232393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000002866	RNase_H2-Ydr279	PF09468.10	6.2e-16	1	1
ENSKMAP00000002855	RNase_H2-Ydr279	PF09468.10	7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000002925	-	1888	XM_017410157	ENSKMAP00000002866	280 (aa)	XP_017265646	UPI0007F9121B
ENSKMAT00000002913	-	1966	XM_017410155	ENSKMAP00000002855	306 (aa)	XP_017265644	UPI0007F8E99F

Gene Model

Click here to download ENSKMAG00000002198's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002198	rnaseh2b	87	53.358	ENSG00000136104	RNASEH2B	95	57.609	Homo_sapiens
ENSKMAG00000002198	rnaseh2b	100	86.928	ENSAPOG00000010496	rnaseh2b	100	86.928	Acanthochromis_polyacanthus
ENSKMAG00000002198	rnaseh2b	90	51.071	ENSAMEG00000012040	RNASEH2B	95	51.071	Ailuropoda_melanoleuca
ENSKMAG00000002198	rnaseh2b	100	72.549	ENSACIG00000021991	rnaseh2b	97	78.000	Amphilophus_citrinellus
ENSKMAG00000002198	rnaseh2b	100	87.255	ENSAOCG00000013398	rnaseh2b	100	87.255	Amphiprion_ocellaris
ENSKMAG00000002198	rnaseh2b	100	86.928	ENSAPEG00000006033	rnaseh2b	100	86.928	Amphiprion_percula
ENSKMAG00000002198	rnaseh2b	100	84.967	ENSATEG00000008370	rnaseh2b	100	84.967	Anabas_testudineus
ENSKMAG00000002198	rnaseh2b	83	64.202	ENSAPLG00000008955	RNASEH2B	99	64.338	Anas_platyrhynchos
ENSKMAG00000002198	rnaseh2b	90	56.989	ENSACAG00000011679	RNASEH2B	94	56.989	Anolis_carolinensis
ENSKMAG00000002198	rnaseh2b	90	51.986	ENSANAG00000020662	RNASEH2B	89	51.986	Aotus_nancymaae
ENSKMAG00000002198	rnaseh2b	100	82.026	ENSACLG00000000467	rnaseh2b	100	82.026	Astatotilapia_calliptera
ENSKMAG00000002198	rnaseh2b	99	68.627	ENSAMXG00000014351	rnaseh2b	99	68.627	Astyanax_mexicanus
ENSKMAG00000002198	rnaseh2b	90	50.357	ENSBTAG00000020149	RNASEH2B	90	50.357	Bos_taurus
ENSKMAG00000002198	rnaseh2b	84	44.068	ENSCJAG00000003822	-	86	44.068	Callithrix_jacchus
ENSKMAG00000002198	rnaseh2b	87	52.632	ENSCJAG00000008585	-	88	52.632	Callithrix_jacchus
ENSKMAG00000002198	rnaseh2b	90	50.903	ENSCAFG00000004295	RNASEH2B	90	50.542	Canis_familiaris
ENSKMAG00000002198	rnaseh2b	90	50.903	ENSCAFG00020000250	RNASEH2B	90	50.903	Canis_lupus_dingo
ENSKMAG00000002198	rnaseh2b	90	51.087	ENSCHIG00000018220	RNASEH2B	90	51.087	Capra_hircus
ENSKMAG00000002198	rnaseh2b	75	48.069	ENSCHIG00000012982	-	82	48.069	Capra_hircus
ENSKMAG00000002198	rnaseh2b	90	43.636	ENSTSYG00000031177	-	90	43.636	Carlito_syrichta
ENSKMAG00000002198	rnaseh2b	90	50.903	ENSTSYG00000009176	-	90	50.903	Carlito_syrichta
ENSKMAG00000002198	rnaseh2b	90	43.682	ENSCAPG00000009978	RNASEH2B	94	43.682	Cavia_aperea
ENSKMAG00000002198	rnaseh2b	90	49.281	ENSCPOG00000032527	RNASEH2B	89	49.281	Cavia_porcellus
ENSKMAG00000002198	rnaseh2b	90	52.000	ENSCCAG00000026979	RNASEH2B	91	52.000	Cebus_capucinus
ENSKMAG00000002198	rnaseh2b	88	52.222	ENSCATG00000031336	RNASEH2B	76	52.222	Cercocebus_atys
ENSKMAG00000002198	rnaseh2b	90	51.625	ENSCLAG00000003517	RNASEH2B	76	51.625	Chinchilla_lanigera
ENSKMAG00000002198	rnaseh2b	89	51.273	ENSCSAG00000017701	RNASEH2B	83	51.273	Chlorocebus_sabaeus
ENSKMAG00000002198	rnaseh2b	95	40.476	ENSCHOG00000013688	RNASEH2B	95	41.497	Choloepus_hoffmanni
ENSKMAG00000002198	rnaseh2b	99	57.143	ENSCPBG00000008684	RNASEH2B	95	57.143	Chrysemys_picta_bellii
ENSKMAG00000002198	rnaseh2b	88	34.783	ENSCING00000016454	-	90	34.783	Ciona_intestinalis
ENSKMAG00000002198	rnaseh2b	90	51.429	ENSCANG00000041511	-	89	51.429	Colobus_angolensis_palliatus
ENSKMAG00000002198	rnaseh2b	90	52.347	ENSCGRG00001000611	Rnaseh2b	90	52.708	Cricetulus_griseus_chok1gshd
ENSKMAG00000002198	rnaseh2b	90	52.347	ENSCGRG00000006077	Rnaseh2b	90	52.708	Cricetulus_griseus_crigri
ENSKMAG00000002198	rnaseh2b	100	81.373	ENSCSEG00000004910	rnaseh2b	100	81.373	Cynoglossus_semilaevis
ENSKMAG00000002198	rnaseh2b	100	85.621	ENSCVAG00000005212	rnaseh2b	100	85.621	Cyprinodon_variegatus
ENSKMAG00000002198	rnaseh2b	99	70.915	ENSDARG00000005128	rnaseh2b	99	70.915	Danio_rerio
ENSKMAG00000002198	rnaseh2b	87	45.865	ENSDNOG00000034290	-	86	45.865	Dasypus_novemcinctus
ENSKMAG00000002198	rnaseh2b	90	48.736	ENSDNOG00000049666	-	89	48.736	Dasypus_novemcinctus
ENSKMAG00000002198	rnaseh2b	91	51.799	ENSDORG00000010708	Rnaseh2b	90	51.799	Dipodomys_ordii
ENSKMAG00000002198	rnaseh2b	83	38.281	ENSEBUG00000005965	rnaseh2b	97	38.281	Eptatretus_burgeri
ENSKMAG00000002198	rnaseh2b	90	52.708	ENSEASG00005017323	RNASEH2B	89	52.708	Equus_asinus_asinus
ENSKMAG00000002198	rnaseh2b	90	53.069	ENSECAG00000014262	RNASEH2B	89	53.069	Equus_caballus
ENSKMAG00000002198	rnaseh2b	100	76.221	ENSELUG00000019560	rnaseh2b	100	76.221	Esox_lucius
ENSKMAG00000002198	rnaseh2b	88	50.000	ENSFCAG00000014257	RNASEH2B	84	50.000	Felis_catus
ENSKMAG00000002198	rnaseh2b	90	63.177	ENSFALG00000008435	RNASEH2B	94	63.177	Ficedula_albicollis
ENSKMAG00000002198	rnaseh2b	87	50.373	ENSFDAG00000009920	RNASEH2B	93	50.373	Fukomys_damarensis
ENSKMAG00000002198	rnaseh2b	100	87.255	ENSFHEG00000012160	rnaseh2b	100	87.255	Fundulus_heteroclitus
ENSKMAG00000002198	rnaseh2b	100	67.308	ENSGMOG00000016830	rnaseh2b	100	67.308	Gadus_morhua
ENSKMAG00000002198	rnaseh2b	95	58.844	ENSGALG00000017015	RNASEH2B	100	59.223	Gallus_gallus
ENSKMAG00000002198	rnaseh2b	100	86.601	ENSGAFG00000021222	rnaseh2b	100	86.601	Gambusia_affinis
ENSKMAG00000002198	rnaseh2b	100	78.846	ENSGACG00000002821	rnaseh2b	100	78.846	Gasterosteus_aculeatus
ENSKMAG00000002198	rnaseh2b	91	60.932	ENSGAGG00000014722	RNASEH2B	99	60.932	Gopherus_agassizii
ENSKMAG00000002198	rnaseh2b	87	52.768	ENSGGOG00000001044	RNASEH2B	87	52.768	Gorilla_gorilla
ENSKMAG00000002198	rnaseh2b	100	82.680	ENSHBUG00000006049	rnaseh2b	100	82.680	Haplochromis_burtoni
ENSKMAG00000002198	rnaseh2b	87	51.119	ENSHGLG00100015953	RNASEH2B	91	51.119	Heterocephalus_glaber_male
ENSKMAG00000002198	rnaseh2b	100	74.351	ENSHCOG00000003318	rnaseh2b	100	74.351	Hippocampus_comes
ENSKMAG00000002198	rnaseh2b	100	72.638	ENSIPUG00000023815	rnaseh2b	100	72.638	Ictalurus_punctatus
ENSKMAG00000002198	rnaseh2b	90	51.636	ENSSTOG00000015126	RNASEH2B	94	51.636	Ictidomys_tridecemlineatus
ENSKMAG00000002198	rnaseh2b	87	52.985	ENSJJAG00000013335	Rnaseh2b	90	52.985	Jaculus_jaculus
ENSKMAG00000002198	rnaseh2b	100	82.026	ENSLBEG00000019331	rnaseh2b	100	82.026	Labrus_bergylta
ENSKMAG00000002198	rnaseh2b	68	64.151	ENSLACG00000010782	RNASEH2B	92	64.035	Latimeria_chalumnae
ENSKMAG00000002198	rnaseh2b	100	69.707	ENSLOCG00000009296	rnaseh2b	100	69.707	Lepisosteus_oculatus
ENSKMAG00000002198	rnaseh2b	90	49.819	ENSLAFG00000030158	RNASEH2B	90	49.819	Loxodonta_africana
ENSKMAG00000002198	rnaseh2b	90	51.986	ENSMFAG00000038464	-	89	51.986	Macaca_fascicularis
ENSKMAG00000002198	rnaseh2b	90	47.292	ENSMMUG00000021746	RNASEH2B	89	46.552	Macaca_mulatta
ENSKMAG00000002198	rnaseh2b	90	51.986	ENSMNEG00000030580	RNASEH2B	89	51.986	Macaca_nemestrina
ENSKMAG00000002198	rnaseh2b	90	51.429	ENSMLEG00000043911	-	89	51.429	Mandrillus_leucophaeus
ENSKMAG00000002198	rnaseh2b	100	83.660	ENSMAMG00000017109	rnaseh2b	100	83.660	Mastacembelus_armatus
ENSKMAG00000002198	rnaseh2b	100	77.778	ENSMZEG00005021926	rnaseh2b	100	78.758	Maylandia_zebra
ENSKMAG00000002198	rnaseh2b	85	62.738	ENSMGAG00000015025	RNASEH2B	97	62.950	Meleagris_gallopavo
ENSKMAG00000002198	rnaseh2b	90	51.986	ENSMAUG00000016520	Rnaseh2b	90	52.347	Mesocricetus_auratus
ENSKMAG00000002198	rnaseh2b	87	51.493	ENSMICG00000000528	RNASEH2B	87	51.493	Microcebus_murinus
ENSKMAG00000002198	rnaseh2b	99	78.689	ENSMMOG00000019799	rnaseh2b	100	83.566	Mola_mola
ENSKMAG00000002198	rnaseh2b	98	54.455	ENSMODG00000010775	RNASEH2B	99	54.455	Monodelphis_domestica
ENSKMAG00000002198	rnaseh2b	99	84.262	ENSMALG00000004463	rnaseh2b	100	84.262	Monopterus_albus
ENSKMAG00000002198	rnaseh2b	72	55.856	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	56.306	Mus_caroli
ENSKMAG00000002198	rnaseh2b	87	54.478	ENSMUSG00000021932	Rnaseh2b	89	53.623	Mus_musculus
ENSKMAG00000002198	rnaseh2b	92	41.538	MGP_PahariEiJ_G0030407	-	93	41.538	Mus_pahari
ENSKMAG00000002198	rnaseh2b	81	47.368	ENSMPUG00000018010	RNASEH2B	93	47.368	Mustela_putorius_furo
ENSKMAG00000002198	rnaseh2b	90	53.237	ENSMLUG00000004065	-	89	53.237	Myotis_lucifugus
ENSKMAG00000002198	rnaseh2b	100	81.373	ENSNBRG00000003253	rnaseh2b	100	81.373	Neolamprologus_brichardi
ENSKMAG00000002198	rnaseh2b	87	52.768	ENSNLEG00000003804	RNASEH2B	87	52.768	Nomascus_leucogenys
ENSKMAG00000002198	rnaseh2b	91	56.738	ENSMEUG00000003665	RNASEH2B	97	56.738	Notamacropus_eugenii
ENSKMAG00000002198	rnaseh2b	53	49.383	ENSOPRG00000003695	-	51	51.220	Ochotona_princeps
ENSKMAG00000002198	rnaseh2b	69	48.095	ENSODEG00000005412	-	86	48.095	Octodon_degus
ENSKMAG00000002198	rnaseh2b	87	51.493	ENSODEG00000006793	-	87	51.493	Octodon_degus
ENSKMAG00000002198	rnaseh2b	100	82.026	ENSONIG00000006657	rnaseh2b	100	82.026	Oreochromis_niloticus
ENSKMAG00000002198	rnaseh2b	91	56.842	ENSOANG00000015537	RNASEH2B	98	56.842	Ornithorhynchus_anatinus
ENSKMAG00000002198	rnaseh2b	88	49.446	ENSOCUG00000008904	RNASEH2B	85	50.923	Oryctolagus_cuniculus
ENSKMAG00000002198	rnaseh2b	99	79.801	ENSORLG00000011850	rnaseh2b	100	79.801	Oryzias_latipes
ENSKMAG00000002198	rnaseh2b	99	79.470	ENSORLG00020012081	rnaseh2b	100	79.470	Oryzias_latipes_hni
ENSKMAG00000002198	rnaseh2b	99	78.808	ENSORLG00015015468	rnaseh2b	100	78.808	Oryzias_latipes_hsok
ENSKMAG00000002198	rnaseh2b	99	81.788	ENSOMEG00000012441	rnaseh2b	100	81.788	Oryzias_melastigma
ENSKMAG00000002198	rnaseh2b	87	51.661	ENSOGAG00000016486	RNASEH2B	91	51.661	Otolemur_garnettii
ENSKMAG00000002198	rnaseh2b	90	51.087	ENSOARG00000008701	RNASEH2B	93	51.087	Ovis_aries
ENSKMAG00000002198	rnaseh2b	87	52.768	ENSPPAG00000026374	RNASEH2B	97	47.345	Pan_paniscus
ENSKMAG00000002198	rnaseh2b	90	49.466	ENSPPRG00000012450	RNASEH2B	92	49.466	Panthera_pardus
ENSKMAG00000002198	rnaseh2b	87	50.735	ENSPTIG00000013918	RNASEH2B	97	50.735	Panthera_tigris_altaica
ENSKMAG00000002198	rnaseh2b	87	52.768	ENSPTRG00000005886	RNASEH2B	95	54.618	Pan_troglodytes
ENSKMAG00000002198	rnaseh2b	91	51.246	ENSPANG00000022424	-	90	51.246	Papio_anubis
ENSKMAG00000002198	rnaseh2b	100	68.404	ENSPKIG00000013386	rnaseh2b	100	68.404	Paramormyrops_kingsleyae
ENSKMAG00000002198	rnaseh2b	64	55.556	ENSPSIG00000002224	RNASEH2B	84	55.556	Pelodiscus_sinensis
ENSKMAG00000002198	rnaseh2b	65	78.788	ENSPMGG00000010299	rnaseh2b	96	78.788	Periophthalmus_magnuspinnatus
ENSKMAG00000002198	rnaseh2b	90	52.347	ENSPEMG00000019721	Rnaseh2b	87	54.074	Peromyscus_maniculatus_bairdii
ENSKMAG00000002198	rnaseh2b	94	52.414	ENSPCIG00000014535	-	97	52.414	Phascolarctos_cinereus
ENSKMAG00000002198	rnaseh2b	100	87.013	ENSPFOG00000016722	rnaseh2b	100	87.013	Poecilia_formosa
ENSKMAG00000002198	rnaseh2b	100	87.255	ENSPLAG00000011755	rnaseh2b	100	87.255	Poecilia_latipinna
ENSKMAG00000002198	rnaseh2b	100	87.582	ENSPMEG00000002721	rnaseh2b	100	87.582	Poecilia_mexicana
ENSKMAG00000002198	rnaseh2b	100	87.255	ENSPREG00000007737	rnaseh2b	100	87.255	Poecilia_reticulata
ENSKMAG00000002198	rnaseh2b	87	52.768	ENSPPYG00000005378	RNASEH2B	86	52.768	Pongo_abelii
ENSKMAG00000002198	rnaseh2b	87	52.030	ENSPCOG00000026623	RNASEH2B	87	52.030	Propithecus_coquereli
ENSKMAG00000002198	rnaseh2b	79	49.590	ENSPVAG00000000508	RNASEH2B	92	49.590	Pteropus_vampyrus
ENSKMAG00000002198	rnaseh2b	100	82.353	ENSPNYG00000013552	rnaseh2b	100	82.353	Pundamilia_nyererei
ENSKMAG00000002198	rnaseh2b	99	68.627	ENSPNAG00000024825	rnaseh2b	99	68.627	Pygocentrus_nattereri
ENSKMAG00000002198	rnaseh2b	90	51.613	ENSRNOG00000009192	Rnaseh2b	90	51.613	Rattus_norvegicus
ENSKMAG00000002198	rnaseh2b	90	51.264	ENSRBIG00000028928	-	89	51.264	Rhinopithecus_bieti
ENSKMAG00000002198	rnaseh2b	89	46.154	ENSRBIG00000036017	-	89	46.154	Rhinopithecus_bieti
ENSKMAG00000002198	rnaseh2b	78	41.284	ENSRROG00000044915	-	84	40.991	Rhinopithecus_roxellana
ENSKMAG00000002198	rnaseh2b	90	51.264	ENSRROG00000018808	-	89	51.264	Rhinopithecus_roxellana
ENSKMAG00000002198	rnaseh2b	90	51.625	ENSSBOG00000008081	RNASEH2B	96	52.985	Saimiri_boliviensis_boliviensis
ENSKMAG00000002198	rnaseh2b	100	54.839	ENSSHAG00000016190	RNASEH2B	100	55.519	Sarcophilus_harrisii
ENSKMAG00000002198	rnaseh2b	99	69.608	ENSSFOG00015010190	rnaseh2b	100	69.608	Scleropages_formosus
ENSKMAG00000002198	rnaseh2b	100	82.026	ENSSMAG00000001546	rnaseh2b	100	82.026	Scophthalmus_maximus
ENSKMAG00000002198	rnaseh2b	100	85.948	ENSSDUG00000007567	rnaseh2b	100	85.948	Seriola_dumerili
ENSKMAG00000002198	rnaseh2b	100	83.713	ENSSLDG00000012485	rnaseh2b	100	83.713	Seriola_lalandi_dorsalis
ENSKMAG00000002198	rnaseh2b	85	55.725	ENSSPUG00000006745	-	94	55.725	Sphenodon_punctatus
ENSKMAG00000002198	rnaseh2b	100	87.255	ENSSPAG00000020926	rnaseh2b	100	87.255	Stegastes_partitus
ENSKMAG00000002198	rnaseh2b	87	52.612	ENSSSCG00000024385	RNASEH2B	95	54.472	Sus_scrofa
ENSKMAG00000002198	rnaseh2b	88	63.235	ENSTGUG00000012104	RNASEH2B	99	63.235	Taeniopygia_guttata
ENSKMAG00000002198	rnaseh2b	100	79.739	ENSTRUG00000015098	rnaseh2b	100	79.739	Takifugu_rubripes
ENSKMAG00000002198	rnaseh2b	100	75.649	ENSTNIG00000013861	rnaseh2b	100	75.649	Tetraodon_nigroviridis
ENSKMAG00000002198	rnaseh2b	90	44.604	ENSTTRG00000010761	RNASEH2B	90	45.324	Tursiops_truncatus
ENSKMAG00000002198	rnaseh2b	90	51.986	ENSUAMG00000022849	RNASEH2B	96	52.985	Ursus_americanus
ENSKMAG00000002198	rnaseh2b	90	51.264	ENSUMAG00000018556	RNASEH2B	96	52.239	Ursus_maritimus
ENSKMAG00000002198	rnaseh2b	87	53.358	ENSVPAG00000005679	RNASEH2B	92	53.358	Vicugna_pacos
ENSKMAG00000002198	rnaseh2b	90	51.264	ENSVVUG00000024015	RNASEH2B	83	51.264	Vulpes_vulpes
ENSKMAG00000002198	rnaseh2b	99	56.818	ENSXETG00000020720	rnaseh2b	100	56.818	Xenopus_tropicalis
ENSKMAG00000002198	rnaseh2b	100	83.713	ENSXCOG00000018732	rnaseh2b	100	83.713	Xiphophorus_couchianus
ENSKMAG00000002198	rnaseh2b	100	86.275	ENSXMAG00000022554	rnaseh2b	100	86.275	Xiphophorus_maculatus