EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000002322 (Gene tree)
Gene ID: 108248551
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6370 bases
Position: chrLWHD01000351.1:18283-24652
Accession: 108248551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003021	RRM_1	PF00076.22	4.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003083	-	943	XM_017437394	ENSKMAP00000003021	256 (aa)	XP_017292883	UPI0007F91512

Gene Model

Click here to download ENSKMAG00000002322's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG
kmr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002322	srsf7a	58	49.333	ENSACIG00000019654	srsf3b	50	71.134	Amphilophus_citrinellus
ENSKMAG00000002322	srsf7a	58	49.333	ENSACLG00000022561	srsf3b	61	71.134	Astatotilapia_calliptera
ENSKMAG00000002322	srsf7a	100	96.094	ENSACLG00000014716	srsf7a	100	96.094	Astatotilapia_calliptera
ENSKMAG00000002322	srsf7a	58	50.327	ENSCSAVG00000007369	-	67	52.066	Ciona_savignyi
ENSKMAG00000002322	srsf7a	52	92.424	ENSCSEG00000006378	srsf7a	79	96.396	Cynoglossus_semilaevis
ENSKMAG00000002322	srsf7a	59	50.331	ENSCSEG00000002271	srsf3b	64	74.118	Cynoglossus_semilaevis
ENSKMAG00000002322	srsf7a	80	66.341	ENSDARG00000035325	srsf7a	86	93.651	Danio_rerio
ENSKMAG00000002322	srsf7a	59	53.704	ENSEBUG00000002677	-	56	68.605	Eptatretus_burgeri
ENSKMAG00000002322	srsf7a	72	56.731	ENSELUG00000018155	srsf7b	80	74.775	Esox_lucius
ENSKMAG00000002322	srsf7a	50	93.023	ENSFHEG00000007159	srsf7a	60	97.273	Fundulus_heteroclitus
ENSKMAG00000002322	srsf7a	50	67.692	ENSGAFG00000008856	srsf7b	78	73.394	Gambusia_affinis
ENSKMAG00000002322	srsf7a	100	96.094	ENSHBUG00000001795	srsf7a	100	96.094	Haplochromis_burtoni
ENSKMAG00000002322	srsf7a	58	51.678	ENSHCOG00000017795	-	76	50.000	Hippocampus_comes
ENSKMAG00000002322	srsf7a	54	56.835	ENSJJAG00000020230	-	68	61.261	Jaculus_jaculus
ENSKMAG00000002322	srsf7a	62	44.304	ENSLBEG00000013364	srsf3b	73	72.941	Labrus_bergylta
ENSKMAG00000002322	srsf7a	68	67.429	ENSLACG00000018688	srsf7a	54	86.486	Latimeria_chalumnae
ENSKMAG00000002322	srsf7a	79	55.122	ENSLOCG00000015778	srsf7b	73	62.222	Lepisosteus_oculatus
ENSKMAG00000002322	srsf7a	69	54.802	ENSLOCG00000014314	-	93	66.848	Lepisosteus_oculatus
ENSKMAG00000002322	srsf7a	100	96.094	ENSMZEG00005024627	srsf7a	100	96.094	Maylandia_zebra
ENSKMAG00000002322	srsf7a	56	52.740	ENSMAUG00000021932	-	54	60.550	Mesocricetus_auratus
ENSKMAG00000002322	srsf7a	67	46.512	ENSMAUG00000011430	-	54	61.446	Mesocricetus_auratus
ENSKMAG00000002322	srsf7a	61	52.201	ENSMLUG00000010671	-	52	74.118	Myotis_lucifugus
ENSKMAG00000002322	srsf7a	63	98.137	ENSNBRG00000006601	srsf7a	73	98.198	Neolamprologus_brichardi
ENSKMAG00000002322	srsf7a	58	49.333	ENSNBRG00000006749	srsf3b	61	71.134	Neolamprologus_brichardi
ENSKMAG00000002322	srsf7a	64	54.545	ENSORLG00015004309	srsf3b	51	74.118	Oryzias_latipes_hsok
ENSKMAG00000002322	srsf7a	59	50.331	ENSOMEG00000014893	srsf3b	56	74.118	Oryzias_melastigma
ENSKMAG00000002322	srsf7a	51	67.407	ENSPKIG00000017425	srsf7b	63	75.676	Paramormyrops_kingsleyae
ENSKMAG00000002322	srsf7a	100	96.094	ENSPNYG00000005994	srsf7a	100	96.094	Pundamilia_nyererei
ENSKMAG00000002322	srsf7a	50	86.719	ENSPNAG00000012288	srsf7a	50	85.600	Pygocentrus_nattereri
ENSKMAG00000002322	srsf7a	61	51.899	ENSPNAG00000010438	srsf3b	53	75.294	Pygocentrus_nattereri
ENSKMAG00000002322	srsf7a	50	96.094	ENSSPAG00000022192	srsf7a	93	96.094	Stegastes_partitus
ENSKMAG00000002322	srsf7a	95	92.181	ENSTRUG00000010529	srsf7a	96	90.164	Takifugu_rubripes
ENSKMAG00000002322	srsf7a	56	52.027	ENSVVUG00000006092	-	69	62.500	Vulpes_vulpes
ENSKMAG00000002322	srsf7a	100	96.109	ENSXMAG00000003050	srsf7a	100	96.109	Xiphophorus_maculatus