EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000002390 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 1985 bases
Position: chrLWHD01000016.1:2267906-2269890
Accession: 108232450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003144	CMS1	PF14617.6	3.9e-33	1	1
ENSKMAP00000003144	DEAD	PF00270.29	7.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003207	-	702	XM_017410240	ENSKMAP00000003144	233 (aa)	XP_017265729	-

Gene Model

Click here to download ENSKMAG00000002390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002390	cmss1	81	53.465	ENSG00000184220	CMSS1	98	42.500	Homo_sapiens
ENSKMAG00000002390	cmss1	82	74.384	ENSAPOG00000010604	cmss1	99	69.919	Acanthochromis_polyacanthus
ENSKMAG00000002390	cmss1	81	54.680	ENSAMEG00000004092	CMSS1	78	54.680	Ailuropoda_melanoleuca
ENSKMAG00000002390	cmss1	99	70.635	ENSACIG00000021854	cmss1	100	71.032	Amphilophus_citrinellus
ENSKMAG00000002390	cmss1	82	72.906	ENSAOCG00000013361	cmss1	92	64.419	Amphiprion_ocellaris
ENSKMAG00000002390	cmss1	82	72.906	ENSAPEG00000005829	cmss1	92	64.552	Amphiprion_percula
ENSKMAG00000002390	cmss1	94	70.124	ENSATEG00000008209	cmss1	94	68.627	Anabas_testudineus
ENSKMAG00000002390	cmss1	81	57.921	ENSAPLG00000010542	CMSS1	88	57.921	Anas_platyrhynchos
ENSKMAG00000002390	cmss1	81	57.921	ENSACAG00000011065	CMSS1	74	57.921	Anolis_carolinensis
ENSKMAG00000002390	cmss1	81	52.970	ENSANAG00000023565	CMSS1	77	52.970	Aotus_nancymaae
ENSKMAG00000002390	cmss1	82	76.355	ENSACLG00000027294	cmss1	92	68.284	Astatotilapia_calliptera
ENSKMAG00000002390	cmss1	80	58.000	ENSAMXG00000002046	cmss1	69	58.621	Astyanax_mexicanus
ENSKMAG00000002390	cmss1	81	54.950	ENSBTAG00000013663	CMSS1	73	54.950	Bos_taurus
ENSKMAG00000002390	cmss1	81	53.960	ENSCJAG00000000610	CMSS1	77	53.960	Callithrix_jacchus
ENSKMAG00000002390	cmss1	81	55.446	ENSCAFG00000009230	CMSS1	73	55.446	Canis_familiaris
ENSKMAG00000002390	cmss1	81	55.446	ENSCAFG00020009464	-	74	55.446	Canis_lupus_dingo
ENSKMAG00000002390	cmss1	81	53.465	ENSCAFG00020024156	-	63	53.465	Canis_lupus_dingo
ENSKMAG00000002390	cmss1	81	54.950	ENSCHIG00000013003	CMSS1	73	54.950	Capra_hircus
ENSKMAG00000002390	cmss1	81	54.455	ENSTSYG00000009266	CMSS1	78	54.455	Carlito_syrichta
ENSKMAG00000002390	cmss1	74	46.774	ENSCAPG00000013584	CMSS1	87	46.774	Cavia_aperea
ENSKMAG00000002390	cmss1	80	55.500	ENSCPOG00000014680	CMSS1	72	55.941	Cavia_porcellus
ENSKMAG00000002390	cmss1	81	54.455	ENSCCAG00000034685	CMSS1	77	54.455	Cebus_capucinus
ENSKMAG00000002390	cmss1	81	54.455	ENSCATG00000031980	CMSS1	77	54.455	Cercocebus_atys
ENSKMAG00000002390	cmss1	80	54.500	ENSCLAG00000011241	CMSS1	87	54.950	Chinchilla_lanigera
ENSKMAG00000002390	cmss1	81	54.455	ENSCSAG00000006024	CMSS1	82	54.455	Chlorocebus_sabaeus
ENSKMAG00000002390	cmss1	80	44.000	ENSCHOG00000012098	CMSS1	73	44.554	Choloepus_hoffmanni
ENSKMAG00000002390	cmss1	80	39.362	ENSCING00000014848	-	90	39.362	Ciona_intestinalis
ENSKMAG00000002390	cmss1	54	46.032	ENSCSAVG00000002309	-	99	46.032	Ciona_savignyi
ENSKMAG00000002390	cmss1	89	52.036	ENSCANG00000031337	CMSS1	77	54.455	Colobus_angolensis_palliatus
ENSKMAG00000002390	cmss1	81	51.980	ENSCGRG00001014305	Cmss1	79	46.502	Cricetulus_griseus_chok1gshd
ENSKMAG00000002390	cmss1	81	51.980	ENSCGRG00000006722	Cmss1	86	46.914	Cricetulus_griseus_crigri
ENSKMAG00000002390	cmss1	82	68.966	ENSCSEG00000004958	cmss1	69	68.966	Cynoglossus_semilaevis
ENSKMAG00000002390	cmss1	94	65.625	ENSCVAG00000005039	cmss1	93	65.056	Cyprinodon_variegatus
ENSKMAG00000002390	cmss1	82	59.606	ENSDARG00000112579	cmss1	93	50.183	Danio_rerio
ENSKMAG00000002390	cmss1	81	54.950	ENSDNOG00000040418	CMSS1	73	54.950	Dasypus_novemcinctus
ENSKMAG00000002390	cmss1	80	54.500	ENSDORG00000010461	Cmss1	72	54.950	Dipodomys_ordii
ENSKMAG00000002390	cmss1	57	53.030	ENSEBUG00000002156	-	96	53.030	Eptatretus_burgeri
ENSKMAG00000002390	cmss1	80	52.500	ENSEASG00005010966	CMSS1	92	52.970	Equus_asinus_asinus
ENSKMAG00000002390	cmss1	80	52.000	ENSECAG00000015662	CMSS1	89	52.475	Equus_caballus
ENSKMAG00000002390	cmss1	82	64.532	ENSELUG00000019459	cmss1	68	64.532	Esox_lucius
ENSKMAG00000002390	cmss1	80	55.000	ENSFCAG00000044577	CMSS1	72	55.446	Felis_catus
ENSKMAG00000002390	cmss1	81	57.426	ENSFALG00000005816	CMSS1	85	57.426	Ficedula_albicollis
ENSKMAG00000002390	cmss1	81	55.446	ENSFDAG00000012577	CMSS1	89	55.446	Fukomys_damarensis
ENSKMAG00000002390	cmss1	93	66.957	ENSFHEG00000012008	cmss1	84	70.936	Fundulus_heteroclitus
ENSKMAG00000002390	cmss1	97	59.289	ENSGMOG00000016729	cmss1	82	63.043	Gadus_morhua
ENSKMAG00000002390	cmss1	99	52.419	ENSGALG00000015267	CMSS1	93	52.869	Gallus_gallus
ENSKMAG00000002390	cmss1	100	66.415	ENSGAFG00000021217	cmss1	100	66.415	Gambusia_affinis
ENSKMAG00000002390	cmss1	82	69.951	ENSGACG00000002798	cmss1	80	62.140	Gasterosteus_aculeatus
ENSKMAG00000002390	cmss1	81	58.911	ENSGAGG00000019861	CMSS1	79	58.911	Gopherus_agassizii
ENSKMAG00000002390	cmss1	81	53.960	ENSGGOG00000014125	CMSS1	77	53.960	Gorilla_gorilla
ENSKMAG00000002390	cmss1	99	65.530	ENSHBUG00000008431	cmss1	94	67.041	Haplochromis_burtoni
ENSKMAG00000002390	cmss1	80	55.000	ENSHGLG00000019481	CMSS1	82	55.446	Heterocephalus_glaber_female
ENSKMAG00000002390	cmss1	80	55.000	ENSHGLG00100010314	CMSS1	81	55.446	Heterocephalus_glaber_male
ENSKMAG00000002390	cmss1	82	70.443	ENSHCOG00000003222	cmss1	69	70.443	Hippocampus_comes
ENSKMAG00000002390	cmss1	96	58.506	ENSIPUG00000011591	cmss1	77	57.613	Ictalurus_punctatus
ENSKMAG00000002390	cmss1	81	54.455	ENSSTOG00000019366	CMSS1	73	54.455	Ictidomys_tridecemlineatus
ENSKMAG00000002390	cmss1	82	54.412	ENSJJAG00000014894	Cmss1	90	54.455	Jaculus_jaculus
ENSKMAG00000002390	cmss1	100	69.672	ENSLBEG00000006298	cmss1	100	69.262	Labrus_bergylta
ENSKMAG00000002390	cmss1	81	61.386	ENSLACG00000009293	CMSS1	88	61.386	Latimeria_chalumnae
ENSKMAG00000002390	cmss1	81	54.455	ENSLOCG00000009391	cmss1	93	47.191	Lepisosteus_oculatus
ENSKMAG00000002390	cmss1	80	54.500	ENSLAFG00000017509	CMSS1	89	54.950	Loxodonta_africana
ENSKMAG00000002390	cmss1	81	53.960	ENSMFAG00000045006	CMSS1	77	53.960	Macaca_fascicularis
ENSKMAG00000002390	cmss1	81	53.465	ENSMMUG00000002939	CMSS1	85	53.646	Macaca_mulatta
ENSKMAG00000002390	cmss1	81	53.960	ENSMNEG00000031315	CMSS1	77	53.960	Macaca_nemestrina
ENSKMAG00000002390	cmss1	81	53.960	ENSMLEG00000033660	CMSS1	77	53.960	Mandrillus_leucophaeus
ENSKMAG00000002390	cmss1	100	64.925	ENSMAMG00000017176	cmss1	92	66.791	Mastacembelus_armatus
ENSKMAG00000002390	cmss1	82	76.355	ENSMZEG00005021886	cmss1	92	68.284	Maylandia_zebra
ENSKMAG00000002390	cmss1	81	57.426	ENSMGAG00000014360	CMSS1	89	58.416	Meleagris_gallopavo
ENSKMAG00000002390	cmss1	81	44.444	ENSMAUG00000020609	Cmss1	74	40.000	Mesocricetus_auratus
ENSKMAG00000002390	cmss1	80	55.000	ENSMICG00000048977	CMSS1	78	55.446	Microcebus_murinus
ENSKMAG00000002390	cmss1	100	48.800	ENSMOCG00000021937	Cmss1	73	53.465	Microtus_ochrogaster
ENSKMAG00000002390	cmss1	94	66.953	ENSMMOG00000019794	cmss1	97	66.524	Mola_mola
ENSKMAG00000002390	cmss1	81	55.446	ENSMODG00000002275	CMSS1	76	55.446	Monodelphis_domestica
ENSKMAG00000002390	cmss1	97	64.751	ENSMALG00000004250	cmss1	92	62.313	Monopterus_albus
ENSKMAG00000002390	cmss1	81	54.455	MGP_CAROLIEiJ_G0020824	Cmss1	73	54.455	Mus_caroli
ENSKMAG00000002390	cmss1	81	53.465	ENSMUSG00000022748	Cmss1	73	53.465	Mus_musculus
ENSKMAG00000002390	cmss1	97	48.594	MGP_PahariEiJ_G0016524	Cmss1	73	53.465	Mus_pahari
ENSKMAG00000002390	cmss1	81	53.465	MGP_SPRETEiJ_G0021724	Cmss1	73	53.465	Mus_spretus
ENSKMAG00000002390	cmss1	80	53.769	ENSMPUG00000011324	CMSS1	78	54.229	Mustela_putorius_furo
ENSKMAG00000002390	cmss1	80	52.970	ENSMLUG00000001131	CMSS1	78	53.431	Myotis_lucifugus
ENSKMAG00000002390	cmss1	81	52.475	ENSNGAG00000020316	Cmss1	72	52.475	Nannospalax_galili
ENSKMAG00000002390	cmss1	99	66.038	ENSNBRG00000003095	cmss1	92	67.910	Neolamprologus_brichardi
ENSKMAG00000002390	cmss1	80	54.000	ENSNLEG00000034172	CMSS1	77	54.455	Nomascus_leucogenys
ENSKMAG00000002390	cmss1	81	45.545	ENSMEUG00000014505	CMSS1	89	45.545	Notamacropus_eugenii
ENSKMAG00000002390	cmss1	81	54.455	ENSOPRG00000002986	CMSS1	73	54.455	Ochotona_princeps
ENSKMAG00000002390	cmss1	96	41.532	ENSODEG00000009446	-	88	43.265	Octodon_degus
ENSKMAG00000002390	cmss1	80	56.000	ENSODEG00000005226	-	72	56.436	Octodon_degus
ENSKMAG00000002390	cmss1	97	44.490	ENSODEG00000001853	-	71	48.980	Octodon_degus
ENSKMAG00000002390	cmss1	81	52.970	ENSODEG00000003558	-	75	52.970	Octodon_degus
ENSKMAG00000002390	cmss1	82	76.355	ENSONIG00000006678	cmss1	99	68.462	Oreochromis_niloticus
ENSKMAG00000002390	cmss1	84	55.288	ENSOANG00000007529	CMSS1	87	55.941	Ornithorhynchus_anatinus
ENSKMAG00000002390	cmss1	81	53.960	ENSOCUG00000025366	CMSS1	73	53.960	Oryctolagus_cuniculus
ENSKMAG00000002390	cmss1	96	63.953	ENSORLG00000020340	cmss1	71	72.906	Oryzias_latipes
ENSKMAG00000002390	cmss1	96	59.746	ENSORLG00020012235	cmss1	100	56.735	Oryzias_latipes_hni
ENSKMAG00000002390	cmss1	82	62.069	ENSORLG00015015551	cmss1	76	62.069	Oryzias_latipes_hsok
ENSKMAG00000002390	cmss1	96	63.281	ENSOMEG00000012555	cmss1	92	63.158	Oryzias_melastigma
ENSKMAG00000002390	cmss1	81	54.455	ENSOGAG00000002045	CMSS1	89	54.950	Otolemur_garnettii
ENSKMAG00000002390	cmss1	81	54.680	ENSOARG00000017899	CMSS1	70	54.680	Ovis_aries
ENSKMAG00000002390	cmss1	81	53.960	ENSPPAG00000038515	CMSS1	74	53.960	Pan_paniscus
ENSKMAG00000002390	cmss1	80	55.000	ENSPPRG00000016767	CMSS1	72	55.446	Panthera_pardus
ENSKMAG00000002390	cmss1	80	54.500	ENSPTIG00000018274	CMSS1	72	54.950	Panthera_tigris_altaica
ENSKMAG00000002390	cmss1	81	53.960	ENSPTRG00000015157	CMSS1	82	53.960	Pan_troglodytes
ENSKMAG00000002390	cmss1	81	54.455	ENSPANG00000019980	CMSS1	80	54.455	Papio_anubis
ENSKMAG00000002390	cmss1	82	61.576	ENSPKIG00000012609	cmss1	98	54.340	Paramormyrops_kingsleyae
ENSKMAG00000002390	cmss1	81	59.406	ENSPSIG00000003849	CMSS1	88	60.396	Pelodiscus_sinensis
ENSKMAG00000002390	cmss1	82	70.098	ENSPMGG00000010286	cmss1	99	62.348	Periophthalmus_magnuspinnatus
ENSKMAG00000002390	cmss1	99	48.163	ENSPEMG00000016384	Cmss1	72	52.970	Peromyscus_maniculatus_bairdii
ENSKMAG00000002390	cmss1	82	46.078	ENSPMAG00000001146	cmss1	99	46.305	Petromyzon_marinus
ENSKMAG00000002390	cmss1	81	54.950	ENSPCIG00000015656	CMSS1	77	54.950	Phascolarctos_cinereus
ENSKMAG00000002390	cmss1	96	64.479	ENSPFOG00000016849	cmss1	94	66.171	Poecilia_formosa
ENSKMAG00000002390	cmss1	96	63.707	ENSPLAG00000008323	cmss1	94	65.799	Poecilia_latipinna
ENSKMAG00000002390	cmss1	96	64.093	ENSPMEG00000021020	cmss1	93	65.799	Poecilia_mexicana
ENSKMAG00000002390	cmss1	96	64.479	ENSPREG00000007618	cmss1	91	64.312	Poecilia_reticulata
ENSKMAG00000002390	cmss1	81	54.455	ENSPPYG00000013606	CMSS1	74	54.455	Pongo_abelii
ENSKMAG00000002390	cmss1	80	54.500	ENSPCOG00000020035	CMSS1	78	54.950	Propithecus_coquereli
ENSKMAG00000002390	cmss1	80	44.000	ENSPVAG00000017031	CMSS1	72	44.554	Pteropus_vampyrus
ENSKMAG00000002390	cmss1	88	64.435	ENSPNYG00000013428	cmss1	89	66.116	Pundamilia_nyererei
ENSKMAG00000002390	cmss1	82	59.606	ENSPNAG00000007912	cmss1	90	50.752	Pygocentrus_nattereri
ENSKMAG00000002390	cmss1	81	52.970	ENSRNOG00000027888	Cmss1	79	52.970	Rattus_norvegicus
ENSKMAG00000002390	cmss1	81	53.960	ENSRBIG00000037931	CMSS1	77	53.960	Rhinopithecus_bieti
ENSKMAG00000002390	cmss1	81	57.143	ENSRROG00000042910	CMSS1	76	56.614	Rhinopithecus_roxellana
ENSKMAG00000002390	cmss1	81	53.960	ENSSBOG00000030980	CMSS1	77	53.960	Saimiri_boliviensis_boliviensis
ENSKMAG00000002390	cmss1	81	55.941	ENSSHAG00000009321	CMSS1	80	55.941	Sarcophilus_harrisii
ENSKMAG00000002390	cmss1	82	64.039	ENSSFOG00015001509	cmss1	70	64.532	Scleropages_formosus
ENSKMAG00000002390	cmss1	94	67.059	ENSSMAG00000001653	cmss1	92	63.941	Scophthalmus_maximus
ENSKMAG00000002390	cmss1	98	64.259	ENSSDUG00000007719	cmss1	93	66.791	Seriola_dumerili
ENSKMAG00000002390	cmss1	98	63.100	ENSSLDG00000012300	cmss1	93	64.493	Seriola_lalandi_dorsalis
ENSKMAG00000002390	cmss1	81	42.289	ENSSARG00000003584	CMSS1	72	42.289	Sorex_araneus
ENSKMAG00000002390	cmss1	81	58.416	ENSSPUG00000003865	CMSS1	89	58.416	Sphenodon_punctatus
ENSKMAG00000002390	cmss1	100	68.992	ENSSPAG00000019182	cmss1	80	67.829	Stegastes_partitus
ENSKMAG00000002390	cmss1	80	53.500	ENSSSCG00000011970	CMSS1	72	53.960	Sus_scrofa
ENSKMAG00000002390	cmss1	81	55.941	ENSTGUG00000013635	CMSS1	88	55.941	Taeniopygia_guttata
ENSKMAG00000002390	cmss1	99	60.456	ENSTRUG00000015265	cmss1	72	70.443	Takifugu_rubripes
ENSKMAG00000002390	cmss1	82	63.547	ENSTNIG00000002880	cmss1	74	63.547	Tetraodon_nigroviridis
ENSKMAG00000002390	cmss1	60	64.706	ENSTBEG00000016722	CMSS1	50	64.706	Tupaia_belangeri
ENSKMAG00000002390	cmss1	81	54.229	ENSTTRG00000001562	CMSS1	72	54.229	Tursiops_truncatus
ENSKMAG00000002390	cmss1	81	54.950	ENSUAMG00000024209	CMSS1	91	54.950	Ursus_americanus
ENSKMAG00000002390	cmss1	81	54.950	ENSUMAG00000001983	CMSS1	78	54.950	Ursus_maritimus
ENSKMAG00000002390	cmss1	60	59.286	ENSVPAG00000000263	CMSS1	50	59.286	Vicugna_pacos
ENSKMAG00000002390	cmss1	81	54.455	ENSVVUG00000007776	-	80	54.455	Vulpes_vulpes
ENSKMAG00000002390	cmss1	80	55.000	ENSVVUG00000021647	-	82	55.446	Vulpes_vulpes
ENSKMAG00000002390	cmss1	97	49.219	ENSXETG00000011858	cmss1	73	55.172	Xenopus_tropicalis
ENSKMAG00000002390	cmss1	100	66.171	ENSXCOG00000018724	cmss1	92	65.799	Xiphophorus_couchianus
ENSKMAG00000002390	cmss1	99	66.045	ENSXMAG00000011243	cmss1	100	65.672	Xiphophorus_maculatus