EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000002448 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5514 bases
Position: chrLWHD01002274.1:3969-9482
Accession: 108229366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003209	zf-C2H2	PF00096.26	1.1e-38	1	6
ENSKMAP00000003209	zf-C2H2	PF00096.26	1.1e-38	2	6
ENSKMAP00000003209	zf-C2H2	PF00096.26	1.1e-38	3	6
ENSKMAP00000003209	zf-C2H2	PF00096.26	1.1e-38	4	6
ENSKMAP00000003209	zf-C2H2	PF00096.26	1.1e-38	5	6
ENSKMAP00000003209	zf-C2H2	PF00096.26	1.1e-38	6	6
ENSKMAP00000003209	zf-met	PF12874.7	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003272	-	726	XM_017405029	ENSKMAP00000003209	241 (aa)	XP_017260518	-

Gene Model

Click here to download ENSKMAG00000002448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000002448	-	82	63.514	ENSKMAG00000021716	-	56	69.072
ENSKMAG00000002448	-	94	43.750	ENSKMAG00000001996	-	92	43.750
ENSKMAG00000002448	-	80	46.341	ENSKMAG00000007922	-	82	46.341
ENSKMAG00000002448	-	83	60.891	ENSKMAG00000003121	-	87	60.891
ENSKMAG00000002448	-	86	44.776	ENSKMAG00000004080	zbtb17	71	44.776
ENSKMAG00000002448	-	89	45.872	ENSKMAG00000021817	znf236	60	45.872
ENSKMAG00000002448	-	87	46.316	ENSKMAG00000018636	-	76	46.316
ENSKMAG00000002448	-	90	49.425	ENSKMAG00000001084	-	78	47.917
ENSKMAG00000002448	-	91	44.565	ENSKMAG00000000543	-	98	44.565
ENSKMAG00000002448	-	83	45.270	ENSKMAG00000000549	-	60	44.056
ENSKMAG00000002448	-	95	54.124	ENSKMAG00000011111	-	99	55.944
ENSKMAG00000002448	-	90	42.857	ENSKMAG00000006450	-	72	42.529
ENSKMAG00000002448	-	94	51.562	ENSKMAG00000006231	-	90	56.364
ENSKMAG00000002448	-	98	49.524	ENSKMAG00000005747	-	86	55.233
ENSKMAG00000002448	-	81	55.556	ENSKMAG00000001357	-	65	55.556
ENSKMAG00000002448	-	86	39.535	ENSKMAG00000008319	-	75	39.535
ENSKMAG00000002448	-	96	47.549	ENSKMAG00000008316	-	94	47.549
ENSKMAG00000002448	-	80	37.313	ENSKMAG00000000620	-	56	37.313
ENSKMAG00000002448	-	90	34.188	ENSKMAG00000014184	-	57	34.188
ENSKMAG00000002448	-	90	43.350	ENSKMAG00000013843	-	72	43.350
ENSKMAG00000002448	-	81	52.055	ENSKMAG00000021194	-	65	44.444
ENSKMAG00000002448	-	90	46.341	ENSKMAG00000007892	-	73	46.341
ENSKMAG00000002448	-	84	43.558	ENSKMAG00000011441	-	68	43.558
ENSKMAG00000002448	-	90	45.198	ENSKMAG00000012909	-	88	45.198
ENSKMAG00000002448	-	79	47.727	ENSKMAG00000003176	-	97	47.727
ENSKMAG00000002448	-	97	43.216	ENSKMAG00000000597	-	95	43.455
ENSKMAG00000002448	-	81	51.327	ENSKMAG00000018656	si:dkey-77f5.14	98	45.390
ENSKMAG00000002448	-	83	44.898	ENSKMAG00000004988	-	87	44.898
ENSKMAG00000002448	-	84	56.818	ENSKMAG00000000371	-	77	55.152
ENSKMAG00000002448	-	80	52.137	ENSKMAG00000009563	-	81	52.137
ENSKMAG00000002448	-	93	42.657	ENSKMAG00000009015	-	95	42.657
ENSKMAG00000002448	-	82	56.081	ENSKMAG00000002032	-	58	56.081
ENSKMAG00000002448	-	87	42.714	ENSKMAG00000000520	-	58	43.421
ENSKMAG00000002448	-	90	47.333	ENSKMAG00000000529	-	72	47.783
ENSKMAG00000002448	-	81	47.895	ENSKMAG00000013745	-	66	47.895
ENSKMAG00000002448	-	91	37.306	ENSKMAG00000009682	-	77	37.824
ENSKMAG00000002448	-	86	46.154	ENSKMAG00000003402	-	53	46.154
ENSKMAG00000002448	-	95	45.876	ENSKMAG00000012934	-	91	45.876
ENSKMAG00000002448	-	96	45.238	ENSKMAG00000021184	-	84	40.000
ENSKMAG00000002448	-	80	42.735	ENSKMAG00000019912	-	53	42.735
ENSKMAG00000002448	-	85	41.964	ENSKMAG00000001186	-	55	41.964
ENSKMAG00000002448	-	87	43.697	ENSKMAG00000000688	-	98	43.697
ENSKMAG00000002448	-	93	47.059	ENSKMAG00000000689	-	93	46.597
ENSKMAG00000002448	-	82	41.420	ENSKMAG00000013663	prdm5	73	41.420
ENSKMAG00000002448	-	88	48.529	ENSKMAG00000000802	-	75	48.529
ENSKMAG00000002448	-	91	43.564	ENSKMAG00000006773	-	76	45.652
ENSKMAG00000002448	-	85	32.680	ENSKMAG00000018546	-	62	32.680
ENSKMAG00000002448	-	84	48.227	ENSKMAG00000009979	-	68	45.985
ENSKMAG00000002448	-	81	51.515	ENSKMAG00000007657	-	53	51.765
ENSKMAG00000002448	-	85	45.026	ENSKMAG00000009648	-	77	45.026
ENSKMAG00000002448	-	80	56.548	ENSKMAG00000005375	-	57	56.548
ENSKMAG00000002448	-	80	41.844	ENSKMAG00000016047	gfi1b	53	41.844
ENSKMAG00000002448	-	85	55.729	ENSKMAG00000006633	-	65	55.729
ENSKMAG00000002448	-	87	56.849	ENSKMAG00000002606	-	83	56.849
ENSKMAG00000002448	-	90	46.597	ENSKMAG00000012202	-	74	46.597
ENSKMAG00000002448	-	89	44.845	ENSKMAG00000001192	-	80	44.845
ENSKMAG00000002448	-	80	46.073	ENSKMAG00000000668	-	78	46.073
ENSKMAG00000002448	-	80	77.835	ENSKMAG00000017095	-	55	77.835
ENSKMAG00000002448	-	99	49.727	ENSKMAG00000002093	-	83	50.262
ENSKMAG00000002448	-	96	41.667	ENSKMAG00000021874	-	85	41.885
ENSKMAG00000002448	-	82	55.556	ENSKMAG00000010903	-	58	54.491
ENSKMAG00000002448	-	82	40.714	ENSKMAG00000007249	znf319b	86	40.714
ENSKMAG00000002448	-	79	59.677	ENSKMAG00000002583	-	92	48.421
ENSKMAG00000002448	-	95	46.154	ENSKMAG00000020046	-	80	46.154
ENSKMAG00000002448	-	85	49.738	ENSKMAG00000008262	-	74	49.738
ENSKMAG00000002448	-	88	38.579	ENSKMAG00000007658	-	90	42.564
ENSKMAG00000002448	-	84	45.263	ENSKMAG00000018648	-	57	45.263
ENSKMAG00000002448	-	83	43.931	ENSKMAG00000020339	-	57	43.931
ENSKMAG00000002448	-	76	52.778	ENSKMAG00000007672	-	56	52.778
ENSKMAG00000002448	-	91	46.269	ENSKMAG00000013290	-	99	46.269
ENSKMAG00000002448	-	80	45.342	ENSKMAG00000018266	-	79	45.342
ENSKMAG00000002448	-	95	46.111	ENSKMAG00000000795	-	99	48.800
ENSKMAG00000002448	-	96	43.119	ENSKMAG00000011982	znf646	70	43.119
ENSKMAG00000002448	-	85	36.232	ENSKMAG00000005484	scrt1b	56	36.232
ENSKMAG00000002448	-	84	45.960	ENSKMAG00000015304	-	63	45.960
ENSKMAG00000002448	-	81	40.367	ENSKMAG00000000556	-	56	39.645
ENSKMAG00000002448	-	95	47.120	ENSKMAG00000000718	-	99	47.120
ENSKMAG00000002448	-	80	46.512	ENSKMAG00000001190	-	96	46.512
ENSKMAG00000002448	-	93	39.394	ENSKMAG00000000702	-	99	39.394
ENSKMAG00000002448	-	96	54.688	ENSKMAG00000003940	-	97	54.688
ENSKMAG00000002448	-	94	44.105	ENSKMAG00000019828	-	76	44.105
ENSKMAG00000002448	-	80	38.095	ENSKMAG00000009489	-	52	38.095
ENSKMAG00000002448	-	93	46.073	ENSKMAG00000003186	-	85	46.073
ENSKMAG00000002448	-	87	47.826	ENSKMAG00000009522	-	62	47.368
ENSKMAG00000002448	-	81	50.000	ENSKMAG00000006686	znf341	51	50.000
ENSKMAG00000002448	-	81	43.455	ENSKMAG00000020025	-	96	43.455
ENSKMAG00000002448	-	86	44.366	ENSKMAG00000003810	gfi1ab	57	44.366
ENSKMAG00000002448	-	91	45.550	ENSKMAG00000013863	-	65	45.550
ENSKMAG00000002448	-	82	49.495	ENSKMAG00000010499	-	50	49.495
ENSKMAG00000002448	-	82	48.913	ENSKMAG00000017443	-	96	48.913
ENSKMAG00000002448	-	80	47.396	ENSKMAG00000006392	-	65	47.396
ENSKMAG00000002448	-	94	48.168	ENSKMAG00000019130	-	81	48.168
ENSKMAG00000002448	-	67	43.529	ENSKMAG00000014629	-	52	43.011
ENSKMAG00000002448	-	81	35.602	ENSKMAG00000007699	-	65	35.602
ENSKMAG00000002448	-	96	46.766	ENSKMAG00000003766	-	98	53.714
ENSKMAG00000002448	-	84	44.211	ENSKMAG00000011850	-	56	44.211
ENSKMAG00000002448	-	90	52.121	ENSKMAG00000011031	-	66	56.716
ENSKMAG00000002448	-	87	45.082	ENSKMAG00000014002	si:ch211-79k12.2	80	45.082
ENSKMAG00000002448	-	83	44.509	ENSKMAG00000000462	-	83	44.509
ENSKMAG00000002448	-	85	72.772	ENSKMAG00000016333	-	96	68.000
ENSKMAG00000002448	-	83	49.495	ENSKMAG00000000387	-	54	50.262
ENSKMAG00000002448	-	91	56.771	ENSKMAG00000010996	-	60	56.771
ENSKMAG00000002448	-	82	39.416	ENSKMAG00000005164	snai2	53	39.416
ENSKMAG00000002448	-	95	42.328	ENSKMAG00000000073	-	79	45.550
ENSKMAG00000002448	-	94	44.538	ENSKMAG00000002022	-	61	44.538
ENSKMAG00000002448	-	80	53.153	ENSKMAG00000019180	-	54	53.153
ENSKMAG00000002448	-	95	34.715	ENSKMAG00000010133	znf526	57	34.715
ENSKMAG00000002448	-	87	46.269	ENSKMAG00000003203	-	90	46.970
ENSKMAG00000002448	-	92	47.150	ENSKMAG00000001171	-	75	47.150
ENSKMAG00000002448	-	99	44.099	ENSKMAG00000010330	zbtb47b	75	44.099
ENSKMAG00000002448	-	93	39.429	ENSKMAG00000004290	-	66	39.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002448	-	85	59.036	ENSAOCG00000022276	-	93	59.036	Amphiprion_ocellaris
ENSKMAG00000002448	-	79	48.168	ENSACLG00000026538	-	83	48.168	Astatotilapia_calliptera
ENSKMAG00000002448	-	80	52.023	ENSGAGG00000005805	-	84	52.023	Gopherus_agassizii
ENSKMAG00000002448	-	96	47.644	ENSGAGG00000020168	-	75	47.644	Gopherus_agassizii
ENSKMAG00000002448	-	85	48.168	ENSMODG00000024585	-	78	48.168	Monodelphis_domestica
ENSKMAG00000002448	-	87	52.356	ENSPCIG00000019488	-	79	52.356	Phascolarctos_cinereus
ENSKMAG00000002448	-	92	37.423	ENSPFOG00000008519	-	98	37.423	Poecilia_formosa
ENSKMAG00000002448	-	79	51.872	ENSPNYG00000018360	-	77	51.872	Pundamilia_nyererei
ENSKMAG00000002448	-	94	53.403	ENSSLDG00000018598	-	87	53.886	Seriola_lalandi_dorsalis
ENSKMAG00000002448	-	80	50.847	ENSXMAG00000022591	-	76	49.351	Xiphophorus_maculatus