EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000002501 (Gene tree)
Gene ID: 108237635
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5452 bases
Position: chrLWHD01000047.1:381928-387379
Accession: 108237635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003314	zf-C2H2	PF00096.26	2.6e-32	1	6
ENSKMAP00000003314	zf-C2H2	PF00096.26	2.6e-32	2	6
ENSKMAP00000003314	zf-C2H2	PF00096.26	2.6e-32	3	6
ENSKMAP00000003314	zf-C2H2	PF00096.26	2.6e-32	4	6
ENSKMAP00000003314	zf-C2H2	PF00096.26	2.6e-32	5	6
ENSKMAP00000003314	zf-C2H2	PF00096.26	2.6e-32	6	6
ENSKMAP00000003314	zf-met	PF12874.7	2.1e-16	1	2
ENSKMAP00000003314	zf-met	PF12874.7	2.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003376	-	3243	XM_017419202	ENSKMAP00000003314	1080 (aa)	XP_017274691	UPI0007F8A66F

Gene Model

Click here to download ENSKMAG00000002501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000002501	sall4	59	46.774	ENSKMAG00000005747	-	96	56.757
ENSKMAG00000002501	sall4	60	47.826	ENSKMAG00000000597	-	96	47.826
ENSKMAG00000002501	sall4	55	50.943	ENSKMAG00000000795	-	97	50.943
ENSKMAG00000002501	sall4	56	48.214	ENSKMAG00000002022	-	60	48.214
ENSKMAG00000002501	sall4	52	53.061	ENSKMAG00000000718	-	94	53.061
ENSKMAG00000002501	sall4	59	44.898	ENSKMAG00000002093	-	80	48.438
ENSKMAG00000002501	sall4	57	46.000	ENSKMAG00000004080	zbtb17	57	46.000
ENSKMAG00000002501	sall4	55	48.214	ENSKMAG00000001996	-	88	48.214
ENSKMAG00000002501	sall4	56	52.941	ENSKMAG00000006231	-	93	52.941
ENSKMAG00000002501	sall4	56	51.020	ENSKMAG00000001192	-	80	51.020
ENSKMAG00000002501	sall4	50	54.000	ENSKMAG00000006633	-	79	54.000
ENSKMAG00000002501	sall4	91	63.462	ENSKMAG00000003846	sall3a	93	45.012
ENSKMAG00000002501	sall4	66	51.020	ENSKMAG00000021817	znf236	71	51.020
ENSKMAG00000002501	sall4	63	41.509	ENSKMAG00000000543	-	97	48.980
ENSKMAG00000002501	sall4	94	65.385	ENSKMAG00000016681	sall1a	96	65.385
ENSKMAG00000002501	sall4	55	38.272	ENSKMAG00000013663	prdm5	74	38.272
ENSKMAG00000002501	sall4	59	46.000	ENSKMAG00000001171	-	78	46.000
ENSKMAG00000002501	sall4	59	45.614	ENSKMAG00000021184	-	75	52.000
ENSKMAG00000002501	sall4	60	49.057	ENSKMAG00000000529	-	69	53.846
ENSKMAG00000002501	sall4	56	41.509	ENSKMAG00000003766	-	94	52.830
ENSKMAG00000002501	sall4	54	42.857	ENSKMAG00000014002	si:ch211-79k12.2	64	47.059
ENSKMAG00000002501	sall4	58	50.000	ENSKMAG00000019130	-	89	47.170

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002501	sall4	100	44.309	ENSG00000101115	SALL4	100	53.333	Homo_sapiens
ENSKMAG00000002501	sall4	100	81.860	ENSAPOG00000002465	sall4	100	81.215	Acanthochromis_polyacanthus
ENSKMAG00000002501	sall4	100	44.609	ENSAMEG00000013250	-	99	46.013	Ailuropoda_melanoleuca
ENSKMAG00000002501	sall4	100	78.821	ENSACIG00000017298	sall4	100	78.177	Amphilophus_citrinellus
ENSKMAG00000002501	sall4	100	82.597	ENSAOCG00000023678	sall4	100	81.952	Amphiprion_ocellaris
ENSKMAG00000002501	sall4	100	82.965	ENSAPEG00000000751	sall4	100	82.320	Amphiprion_percula
ENSKMAG00000002501	sall4	100	82.521	ENSATEG00000024480	sall4	100	81.785	Anabas_testudineus
ENSKMAG00000002501	sall4	99	52.529	ENSAPLG00000006498	SALL4	100	52.473	Anas_platyrhynchos
ENSKMAG00000002501	sall4	100	51.476	ENSACAG00000012748	SALL4	100	51.730	Anolis_carolinensis
ENSKMAG00000002501	sall4	100	43.788	ENSANAG00000023352	SALL4	86	67.308	Aotus_nancymaae
ENSKMAG00000002501	sall4	100	79.301	ENSACLG00000017851	sall4	100	78.841	Astatotilapia_calliptera
ENSKMAG00000002501	sall4	99	64.658	ENSAMXG00000001254	sall4	99	65.392	Astyanax_mexicanus
ENSKMAG00000002501	sall4	100	42.479	ENSBTAG00000003101	SALL4	100	43.215	Bos_taurus
ENSKMAG00000002501	sall4	81	46.615	ENSCJAG00000000591	SALL4	97	45.554	Callithrix_jacchus
ENSKMAG00000002501	sall4	100	44.737	ENSCAFG00000011738	-	100	44.806	Canis_familiaris
ENSKMAG00000002501	sall4	100	44.649	ENSCAFG00020021870	SALL4	100	44.718	Canis_lupus_dingo
ENSKMAG00000002501	sall4	100	42.466	ENSCHIG00000026270	SALL4	100	42.380	Capra_hircus
ENSKMAG00000002501	sall4	100	43.307	ENSTSYG00000007359	SALL4	100	52.049	Carlito_syrichta
ENSKMAG00000002501	sall4	97	44.700	ENSCAPG00000012135	SALL4	95	44.546	Cavia_aperea
ENSKMAG00000002501	sall4	100	40.227	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSKMAG00000002501	sall4	100	44.358	ENSCATG00000030757	SALL4	86	67.308	Cercocebus_atys
ENSKMAG00000002501	sall4	100	44.308	ENSCLAG00000010479	SALL4	100	44.154	Chinchilla_lanigera
ENSKMAG00000002501	sall4	100	44.483	ENSCSAG00000015269	SALL4	100	44.298	Chlorocebus_sabaeus
ENSKMAG00000002501	sall4	99	52.650	ENSCPBG00000014995	SALL4	99	52.515	Chrysemys_picta_bellii
ENSKMAG00000002501	sall4	100	44.309	ENSCANG00000036463	SALL4	100	43.641	Colobus_angolensis_palliatus
ENSKMAG00000002501	sall4	100	41.476	ENSCGRG00001019569	Sall4	100	47.273	Cricetulus_griseus_chok1gshd
ENSKMAG00000002501	sall4	100	41.361	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSKMAG00000002501	sall4	100	78.062	ENSCSEG00000014604	sall4	100	77.605	Cynoglossus_semilaevis
ENSKMAG00000002501	sall4	100	82.532	ENSCVAG00000010815	sall4	100	82.810	Cyprinodon_variegatus
ENSKMAG00000002501	sall4	99	64.796	ENSDARG00000044485	sall4	99	64.796	Danio_rerio
ENSKMAG00000002501	sall4	100	44.965	ENSDNOG00000040633	SALL4	100	44.648	Dasypus_novemcinctus
ENSKMAG00000002501	sall4	100	42.030	ENSDORG00000012841	Sall4	100	60.345	Dipodomys_ordii
ENSKMAG00000002501	sall4	69	65.385	ENSETEG00000012475	-	63	65.385	Echinops_telfairi
ENSKMAG00000002501	sall4	64	58.621	ENSEBUG00000015425	-	92	72.222	Eptatretus_burgeri
ENSKMAG00000002501	sall4	100	44.762	ENSECAG00000018533	SALL4	100	44.512	Equus_caballus
ENSKMAG00000002501	sall4	100	43.421	ENSEEUG00000003649	SALL4	99	42.170	Erinaceus_europaeus
ENSKMAG00000002501	sall4	100	64.444	ENSELUG00000005696	sall4	100	64.576	Esox_lucius
ENSKMAG00000002501	sall4	100	43.777	ENSFCAG00000002822	SALL4	100	43.772	Felis_catus
ENSKMAG00000002501	sall4	100	50.920	ENSFALG00000013149	SALL4	100	51.528	Ficedula_albicollis
ENSKMAG00000002501	sall4	100	42.683	ENSFDAG00000017812	SALL4	91	63.462	Fukomys_damarensis
ENSKMAG00000002501	sall4	100	81.919	ENSFHEG00000014187	sall4	100	81.919	Fundulus_heteroclitus
ENSKMAG00000002501	sall4	100	70.275	ENSGMOG00000003822	sall4	100	70.275	Gadus_morhua
ENSKMAG00000002501	sall4	100	52.347	ENSGALG00000041365	SALL4	100	52.790	Gallus_gallus
ENSKMAG00000002501	sall4	100	83.457	ENSGAFG00000019925	sall4	100	83.457	Gambusia_affinis
ENSKMAG00000002501	sall4	100	75.616	ENSGACG00000011124	sall4	100	75.160	Gasterosteus_aculeatus
ENSKMAG00000002501	sall4	99	52.343	ENSGAGG00000002297	SALL4	99	52.473	Gopherus_agassizii
ENSKMAG00000002501	sall4	100	44.222	ENSGGOG00000001832	SALL4	86	67.308	Gorilla_gorilla
ENSKMAG00000002501	sall4	100	79.485	ENSHBUG00000007327	sall4	100	79.025	Haplochromis_burtoni
ENSKMAG00000002501	sall4	97	43.658	ENSHGLG00000009043	SALL4	95	43.330	Heterocephalus_glaber_female
ENSKMAG00000002501	sall4	97	43.658	ENSHGLG00100002722	SALL4	95	43.330	Heterocephalus_glaber_male
ENSKMAG00000002501	sall4	100	75.688	ENSHCOG00000008519	sall4	100	75.138	Hippocampus_comes
ENSKMAG00000002501	sall4	99	64.305	ENSIPUG00000019170	sall4	99	64.240	Ictalurus_punctatus
ENSKMAG00000002501	sall4	62	56.863	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSKMAG00000002501	sall4	100	44.629	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSKMAG00000002501	sall4	100	78.532	ENSLBEG00000019951	sall4	100	77.706	Labrus_bergylta
ENSKMAG00000002501	sall4	96	48.241	ENSLACG00000013898	SALL4	99	59.474	Latimeria_chalumnae
ENSKMAG00000002501	sall4	100	62.727	ENSLOCG00000002427	sall4	100	62.873	Lepisosteus_oculatus
ENSKMAG00000002501	sall4	100	44.222	ENSLAFG00000004309	SALL4	100	44.288	Loxodonta_africana
ENSKMAG00000002501	sall4	100	44.003	ENSMFAG00000027169	SALL4	100	43.641	Macaca_fascicularis
ENSKMAG00000002501	sall4	87	45.973	ENSMMUG00000003870	SALL4	100	58.416	Macaca_mulatta
ENSKMAG00000002501	sall4	87	45.973	ENSMNEG00000035995	SALL4	86	67.308	Macaca_nemestrina
ENSKMAG00000002501	sall4	100	44.090	ENSMLEG00000030467	SALL4	100	43.728	Mandrillus_leucophaeus
ENSKMAG00000002501	sall4	100	80.727	ENSMAMG00000005223	sall4	100	80.091	Mastacembelus_armatus
ENSKMAG00000002501	sall4	100	79.301	ENSMZEG00005023418	sall4	100	78.841	Maylandia_zebra
ENSKMAG00000002501	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSKMAG00000002501	sall4	100	42.351	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSKMAG00000002501	sall4	100	44.657	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSKMAG00000002501	sall4	100	43.539	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSKMAG00000002501	sall4	100	80.974	ENSMMOG00000014929	sall4	100	80.331	Mola_mola
ENSKMAG00000002501	sall4	99	47.140	ENSMODG00000016387	SALL4	97	46.902	Monodelphis_domestica
ENSKMAG00000002501	sall4	100	82.920	ENSMALG00000018709	sall4	100	83.015	Monopterus_albus
ENSKMAG00000002501	sall4	100	42.440	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSKMAG00000002501	sall4	100	42.274	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSKMAG00000002501	sall4	100	41.582	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSKMAG00000002501	sall4	100	42.411	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSKMAG00000002501	sall4	100	44.202	ENSMPUG00000017543	SALL4	96	44.289	Mustela_putorius_furo
ENSKMAG00000002501	sall4	99	34.955	ENSMLUG00000028073	-	99	34.442	Myotis_lucifugus
ENSKMAG00000002501	sall4	98	44.173	ENSMLUG00000007060	-	99	43.949	Myotis_lucifugus
ENSKMAG00000002501	sall4	100	41.314	ENSMLUG00000008405	-	100	40.888	Myotis_lucifugus
ENSKMAG00000002501	sall4	100	43.536	ENSNGAG00000017833	Sall4	100	43.547	Nannospalax_galili
ENSKMAG00000002501	sall4	100	79.006	ENSNBRG00000001829	sall4	100	79.006	Neolamprologus_brichardi
ENSKMAG00000002501	sall4	100	43.860	ENSNLEG00000007013	SALL4	100	43.168	Nomascus_leucogenys
ENSKMAG00000002501	sall4	84	65.385	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSKMAG00000002501	sall4	100	44.425	ENSOPRG00000011640	SALL4	100	44.339	Ochotona_princeps
ENSKMAG00000002501	sall4	100	79.945	ENSONIG00000016557	sall4	100	80.313	Oreochromis_niloticus
ENSKMAG00000002501	sall4	99	51.767	ENSOANG00000008667	SALL4	97	52.070	Ornithorhynchus_anatinus
ENSKMAG00000002501	sall4	97	44.751	ENSOCUG00000011797	SALL4	98	44.691	Oryctolagus_cuniculus
ENSKMAG00000002501	sall4	100	79.244	ENSORLG00000016130	sall4	100	79.244	Oryzias_latipes
ENSKMAG00000002501	sall4	100	79.482	ENSORLG00020007339	sall4	100	79.482	Oryzias_latipes_hni
ENSKMAG00000002501	sall4	100	79.336	ENSORLG00015002265	sall4	100	79.336	Oryzias_latipes_hsok
ENSKMAG00000002501	sall4	100	80.517	ENSOMEG00000017344	sall4	100	80.517	Oryzias_melastigma
ENSKMAG00000002501	sall4	97	45.247	ENSOGAG00000013799	SALL4	99	44.742	Otolemur_garnettii
ENSKMAG00000002501	sall4	100	41.391	ENSOARG00000014570	SALL4	100	41.791	Ovis_aries
ENSKMAG00000002501	sall4	100	43.907	ENSPPAG00000038064	SALL4	86	67.308	Pan_paniscus
ENSKMAG00000002501	sall4	100	44.182	ENSPPRG00000008677	SALL4	100	44.049	Panthera_pardus
ENSKMAG00000002501	sall4	100	44.222	ENSPTRG00000013631	SALL4	86	67.308	Pan_troglodytes
ENSKMAG00000002501	sall4	87	45.973	ENSPANG00000021792	SALL4	86	67.308	Papio_anubis
ENSKMAG00000002501	sall4	100	62.829	ENSPKIG00000007074	sall4	100	62.091	Paramormyrops_kingsleyae
ENSKMAG00000002501	sall4	99	52.381	ENSPSIG00000009066	SALL4	99	52.339	Pelodiscus_sinensis
ENSKMAG00000002501	sall4	100	68.571	ENSPMGG00000022551	sall4	100	68.387	Periophthalmus_magnuspinnatus
ENSKMAG00000002501	sall4	100	42.745	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSKMAG00000002501	sall4	99	48.100	ENSPCIG00000022838	SALL4	97	48.113	Phascolarctos_cinereus
ENSKMAG00000002501	sall4	100	83.457	ENSPFOG00000001442	sall4	100	83.457	Poecilia_formosa
ENSKMAG00000002501	sall4	100	83.364	ENSPLAG00000008760	sall4	100	83.364	Poecilia_latipinna
ENSKMAG00000002501	sall4	100	83.549	ENSPMEG00000008497	sall4	100	83.549	Poecilia_mexicana
ENSKMAG00000002501	sall4	100	83.272	ENSPREG00000021140	sall4	100	83.272	Poecilia_reticulata
ENSKMAG00000002501	sall4	100	43.843	ENSPPYG00000011138	SALL4	100	43.837	Pongo_abelii
ENSKMAG00000002501	sall4	100	42.796	ENSPCAG00000004726	SALL4	99	42.795	Procavia_capensis
ENSKMAG00000002501	sall4	100	44.358	ENSPCOG00000016321	SALL4	100	43.892	Propithecus_coquereli
ENSKMAG00000002501	sall4	94	43.785	ENSPVAG00000002075	SALL4	94	43.438	Pteropus_vampyrus
ENSKMAG00000002501	sall4	100	79.282	ENSPNYG00000021738	sall4	100	78.821	Pundamilia_nyererei
ENSKMAG00000002501	sall4	99	65.479	ENSPNAG00000020929	sall4	99	65.936	Pygocentrus_nattereri
ENSKMAG00000002501	sall4	100	42.548	ENSRNOG00000050035	Sall4	100	42.709	Rattus_norvegicus
ENSKMAG00000002501	sall4	100	44.021	ENSRBIG00000039876	SALL4	100	43.554	Rhinopithecus_bieti
ENSKMAG00000002501	sall4	100	43.831	ENSRROG00000036585	SALL4	100	43.641	Rhinopithecus_roxellana
ENSKMAG00000002501	sall4	100	44.444	ENSSBOG00000030011	SALL4	100	43.864	Saimiri_boliviensis_boliviensis
ENSKMAG00000002501	sall4	97	63.265	ENSSHAG00000018013	SALL4	90	63.265	Sarcophilus_harrisii
ENSKMAG00000002501	sall4	100	63.077	ENSSFOG00015021075	sall4	100	63.348	Scleropages_formosus
ENSKMAG00000002501	sall4	100	81.210	ENSSMAG00000019218	sall4	99	80.843	Scophthalmus_maximus
ENSKMAG00000002501	sall4	100	84.404	ENSSDUG00000004657	sall4	100	83.853	Seriola_dumerili
ENSKMAG00000002501	sall4	100	83.394	ENSSLDG00000004973	sall4	100	83.670	Seriola_lalandi_dorsalis
ENSKMAG00000002501	sall4	100	83.057	ENSSPAG00000001978	sall4	100	82.413	Stegastes_partitus
ENSKMAG00000002501	sall4	100	44.522	ENSSSCG00000007479	SALL4	100	44.170	Sus_scrofa
ENSKMAG00000002501	sall4	100	77.156	ENSTRUG00000007410	sall4	100	76.422	Takifugu_rubripes
ENSKMAG00000002501	sall4	100	75.184	ENSTNIG00000012460	sall4	100	74.816	Tetraodon_nigroviridis
ENSKMAG00000002501	sall4	98	43.001	ENSTTRG00000007753	SALL4	99	43.583	Tursiops_truncatus
ENSKMAG00000002501	sall4	100	44.309	ENSUAMG00000010113	SALL4	100	44.668	Ursus_americanus
ENSKMAG00000002501	sall4	97	45.055	ENSUMAG00000024274	SALL4	98	44.749	Ursus_maritimus
ENSKMAG00000002501	sall4	100	50.134	ENSXETG00000012326	sall4	100	49.286	Xenopus_tropicalis
ENSKMAG00000002501	sall4	100	74.399	ENSXCOG00000015467	sall4	100	74.399	Xiphophorus_couchianus
ENSKMAG00000002501	sall4	84	81.620	ENSXMAG00000012692	sall4	100	72.903	Xiphophorus_maculatus