EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000002780 (Gene tree)
Gene ID: 108245385
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 7153 bases
Position: chrLWHD01000004.1:7773973-7781125
Accession: 108245385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003648	zf-C2H2	PF00096.26	3.8e-12	1	3
ENSKMAP00000003648	zf-C2H2	PF00096.26	3.8e-12	2	3
ENSKMAP00000003648	zf-C2H2	PF00096.26	3.8e-12	3	3
ENSKMAP00000003658	zf-C2H2	PF00096.26	4.1e-12	1	3
ENSKMAP00000003658	zf-C2H2	PF00096.26	4.1e-12	2	3
ENSKMAP00000003658	zf-C2H2	PF00096.26	4.1e-12	3	3
ENSKMAP00000003648	zf-met	PF12874.7	3.7e-06	1	1
ENSKMAP00000003658	zf-met	PF12874.7	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003727	-	4797	XM_017432262	ENSKMAP00000003658	584 (aa)	XP_017287751	UPI0007F8C515
ENSKMAT00000003717	-	4578	XM_017432271	ENSKMAP00000003648	576 (aa)	XP_017287760	UPI0007F89932

Gene Model

Click here to download ENSKMAG00000002780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000002780	zbtb18	92	41.026	ENSKMAG00000017553	zbtb16a	50	41.026
ENSKMAG00000002780	zbtb18	55	32.609	ENSKMAG00000003820	ZBTB14	78	32.609
ENSKMAG00000002780	zbtb18	51	37.975	ENSKMAG00000004732	zbtb41	58	37.975
ENSKMAG00000002780	zbtb18	54	31.746	ENSKMAG00000002087	bcl6ab	54	31.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002780	zbtb18	100	95.509	ENSAPOG00000005168	zbtb18	100	94.991	Acanthochromis_polyacanthus
ENSKMAG00000002780	zbtb18	99	86.316	ENSACIG00000008655	zbtb18	100	85.864	Amphilophus_citrinellus
ENSKMAG00000002780	zbtb18	100	95.911	ENSAOCG00000014105	zbtb18	100	95.400	Amphiprion_ocellaris
ENSKMAG00000002780	zbtb18	100	95.017	ENSAPEG00000003817	zbtb18	79	94.674	Amphiprion_percula
ENSKMAG00000002780	zbtb18	100	94.618	ENSATEG00000010192	zbtb18	100	94.618	Anabas_testudineus
ENSKMAG00000002780	zbtb18	100	96.575	ENSACLG00000022978	zbtb18	100	96.575	Astatotilapia_calliptera
ENSKMAG00000002780	zbtb18	100	73.604	ENSAMXG00000042119	zbtb18	100	73.266	Astyanax_mexicanus
ENSKMAG00000002780	zbtb18	100	92.637	ENSCSEG00000003083	zbtb18	100	92.637	Cynoglossus_semilaevis
ENSKMAG00000002780	zbtb18	100	95.205	ENSCVAG00000016785	zbtb18	100	95.205	Cyprinodon_variegatus
ENSKMAG00000002780	zbtb18	98	72.251	ENSDARG00000028228	zbtb18	100	74.171	Danio_rerio
ENSKMAG00000002780	zbtb18	99	75.390	ENSELUG00000013471	zbtb18	99	75.174	Esox_lucius
ENSKMAG00000002780	zbtb18	99	95.819	ENSFHEG00000020005	zbtb18	99	95.819	Fundulus_heteroclitus
ENSKMAG00000002780	zbtb18	56	96.183	ENSGMOG00000018718	zbtb18	59	92.254	Gadus_morhua
ENSKMAG00000002780	zbtb18	100	93.426	ENSGAFG00000000619	zbtb18	100	93.426	Gambusia_affinis
ENSKMAG00000002780	zbtb18	99	90.702	ENSGACG00000010518	zbtb18	96	91.404	Gasterosteus_aculeatus
ENSKMAG00000002780	zbtb18	100	96.354	ENSHBUG00000013654	zbtb18	100	96.354	Haplochromis_burtoni
ENSKMAG00000002780	zbtb18	61	83.158	ENSHCOG00000002345	zbtb18	94	83.158	Hippocampus_comes
ENSKMAG00000002780	zbtb18	100	66.838	ENSIPUG00000008912	zbtb18	100	65.690	Ictalurus_punctatus
ENSKMAG00000002780	zbtb18	100	93.056	ENSLBEG00000014796	zbtb18	100	93.056	Labrus_bergylta
ENSKMAG00000002780	zbtb18	84	60.200	ENSMFAG00000033326	ZBTB18	99	58.317	Macaca_fascicularis
ENSKMAG00000002780	zbtb18	84	60.321	ENSMMUG00000015664	ZBTB18	100	58.418	Macaca_mulatta
ENSKMAG00000002780	zbtb18	100	95.139	ENSMAMG00000021720	zbtb18	100	95.139	Mastacembelus_armatus
ENSKMAG00000002780	zbtb18	100	96.575	ENSMZEG00005027394	zbtb18	100	96.575	Maylandia_zebra
ENSKMAG00000002780	zbtb18	94	51.197	ENSMGAG00000015389	-	100	51.941	Meleagris_gallopavo
ENSKMAG00000002780	zbtb18	98	86.926	ENSMMOG00000007888	zbtb18	99	86.926	Mola_mola
ENSKMAG00000002780	zbtb18	100	94.097	ENSMALG00000000725	zbtb18	100	94.097	Monopterus_albus
ENSKMAG00000002780	zbtb18	98	96.283	ENSNBRG00000013796	zbtb18	100	96.283	Neolamprologus_brichardi
ENSKMAG00000002780	zbtb18	100	96.354	ENSONIG00000000862	zbtb18	100	96.354	Oreochromis_niloticus
ENSKMAG00000002780	zbtb18	100	94.349	ENSORLG00000027425	zbtb18	100	94.349	Oryzias_latipes
ENSKMAG00000002780	zbtb18	100	94.521	ENSORLG00020011988	zbtb18	100	94.521	Oryzias_latipes_hni
ENSKMAG00000002780	zbtb18	100	94.349	ENSORLG00015017457	zbtb18	100	94.349	Oryzias_latipes_hsok
ENSKMAG00000002780	zbtb18	100	94.692	ENSOMEG00000011249	zbtb18	100	94.692	Oryzias_melastigma
ENSKMAG00000002780	zbtb18	98	55.263	ENSPKIG00000008787	-	100	54.497	Paramormyrops_kingsleyae
ENSKMAG00000002780	zbtb18	99	71.034	ENSPKIG00000021964	zbtb18	97	71.017	Paramormyrops_kingsleyae
ENSKMAG00000002780	zbtb18	98	82.832	ENSPMGG00000008020	zbtb18	100	82.832	Periophthalmus_magnuspinnatus
ENSKMAG00000002780	zbtb18	98	92.756	ENSPFOG00000022080	zbtb18	100	92.756	Poecilia_formosa
ENSKMAG00000002780	zbtb18	98	86.926	ENSPLAG00000011299	-	100	86.926	Poecilia_latipinna
ENSKMAG00000002780	zbtb18	98	86.926	ENSPLAG00000020960	zbtb18	100	86.926	Poecilia_latipinna
ENSKMAG00000002780	zbtb18	98	93.640	ENSPMEG00000007554	zbtb18	100	93.640	Poecilia_mexicana
ENSKMAG00000002780	zbtb18	100	94.017	ENSPREG00000008576	zbtb18	100	94.017	Poecilia_reticulata
ENSKMAG00000002780	zbtb18	100	96.354	ENSPNYG00000001530	zbtb18	100	96.354	Pundamilia_nyererei
ENSKMAG00000002780	zbtb18	86	72.125	ENSPNAG00000014066	zbtb18	87	71.735	Pygocentrus_nattereri
ENSKMAG00000002780	zbtb18	98	92.389	ENSSMAG00000018041	zbtb18	100	92.389	Scophthalmus_maximus
ENSKMAG00000002780	zbtb18	98	95.752	ENSSDUG00000018660	zbtb18	100	95.752	Seriola_dumerili
ENSKMAG00000002780	zbtb18	98	95.752	ENSSLDG00000022573	zbtb18	100	95.752	Seriola_lalandi_dorsalis
ENSKMAG00000002780	zbtb18	53	50.489	ENSSPUG00000010554	-	100	49.727	Sphenodon_punctatus
ENSKMAG00000002780	zbtb18	100	96.007	ENSSPAG00000002691	zbtb18	100	96.007	Stegastes_partitus
ENSKMAG00000002780	zbtb18	98	92.920	ENSTRUG00000020604	zbtb18	100	92.920	Takifugu_rubripes
ENSKMAG00000002780	zbtb18	99	85.391	ENSTNIG00000000430	zbtb18	99	85.689	Tetraodon_nigroviridis
ENSKMAG00000002780	zbtb18	98	88.516	ENSXCOG00000013308	zbtb18	100	87.633	Xiphophorus_couchianus
ENSKMAG00000002780	zbtb18	99	83.888	ENSXMAG00000018241	zbtb18	99	83.888	Xiphophorus_maculatus