EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000002852 (Gene tree)
Gene ID: 108238844
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 32622 bases
Position: chrLWHD01000058.1:416251-448872
Accession: 108238844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003734	Rif1_N	PF12231.8	2.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003806	-	7863	XM_017421166	ENSKMAP00000003734	2345 (aa)	XP_017276655	UPI0007F90965

Gene Model

Click here to download ENSKMAG00000002852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002852	rif1	67	49.055	ENSG00000080345	RIF1	97	53.228	Homo_sapiens
ENSKMAG00000002852	rif1	99	66.113	ENSAPOG00000011073	rif1	97	66.175	Acanthochromis_polyacanthus
ENSKMAG00000002852	rif1	67	50.000	ENSAMEG00000008461	RIF1	64	50.000	Ailuropoda_melanoleuca
ENSKMAG00000002852	rif1	57	72.202	ENSACIG00000017765	rif1	60	71.991	Amphilophus_citrinellus
ENSKMAG00000002852	rif1	99	66.771	ENSAOCG00000017231	rif1	97	66.959	Amphiprion_ocellaris
ENSKMAG00000002852	rif1	96	76.076	ENSAPEG00000013228	rif1	99	75.823	Amphiprion_percula
ENSKMAG00000002852	rif1	100	60.575	ENSATEG00000022887	rif1	99	62.500	Anabas_testudineus
ENSKMAG00000002852	rif1	67	50.039	ENSANAG00000024840	RIF1	64	50.275	Aotus_nancymaae
ENSKMAG00000002852	rif1	78	56.695	ENSAMXG00000010910	rif1	76	56.410	Astyanax_mexicanus
ENSKMAG00000002852	rif1	60	51.079	ENSBTAG00000021020	RIF1	61	51.079	Bos_taurus
ENSKMAG00000002852	rif1	67	49.921	ENSCJAG00000003138	RIF1	64	49.921	Callithrix_jacchus
ENSKMAG00000002852	rif1	67	49.254	ENSCAFG00000005670	RIF1	62	49.254	Canis_familiaris
ENSKMAG00000002852	rif1	67	49.370	ENSCAFG00020016401	RIF1	65	49.370	Canis_lupus_dingo
ENSKMAG00000002852	rif1	66	49.843	ENSCHIG00000020327	RIF1	63	49.843	Capra_hircus
ENSKMAG00000002852	rif1	67	46.372	ENSTSYG00000008861	RIF1	63	46.372	Carlito_syrichta
ENSKMAG00000002852	rif1	57	40.119	ENSCAPG00000008957	RIF1	80	37.394	Cavia_aperea
ENSKMAG00000002852	rif1	51	47.801	ENSCPOG00000037898	RIF1	63	42.224	Cavia_porcellus
ENSKMAG00000002852	rif1	67	47.161	ENSCCAG00000024760	RIF1	64	47.161	Cebus_capucinus
ENSKMAG00000002852	rif1	53	49.566	ENSCATG00000033353	RIF1	63	49.566	Cercocebus_atys
ENSKMAG00000002852	rif1	62	50.558	ENSCLAG00000001517	RIF1	62	50.516	Chinchilla_lanigera
ENSKMAG00000002852	rif1	53	49.724	ENSCSAG00000016089	RIF1	51	49.724	Chlorocebus_sabaeus
ENSKMAG00000002852	rif1	68	45.532	ENSCHOG00000007187	RIF1	65	45.532	Choloepus_hoffmanni
ENSKMAG00000002852	rif1	67	50.723	ENSCPBG00000025885	RIF1	84	46.532	Chrysemys_picta_bellii
ENSKMAG00000002852	rif1	53	49.567	ENSCANG00000028962	RIF1	53	49.567	Colobus_angolensis_palliatus
ENSKMAG00000002852	rif1	97	55.048	ENSCSEG00000003945	rif1	99	55.532	Cynoglossus_semilaevis
ENSKMAG00000002852	rif1	99	60.434	ENSCVAG00000022479	rif1	100	60.688	Cyprinodon_variegatus
ENSKMAG00000002852	rif1	61	55.326	ENSDARG00000062650	rif1	64	53.034	Danio_rerio
ENSKMAG00000002852	rif1	73	45.854	ENSDNOG00000011194	RIF1	67	46.071	Dasypus_novemcinctus
ENSKMAG00000002852	rif1	62	52.018	ENSETEG00000012421	RIF1	60	52.018	Echinops_telfairi
ENSKMAG00000002852	rif1	58	65.461	ENSEASG00005023434	RIF1	57	65.461	Equus_asinus_asinus
ENSKMAG00000002852	rif1	64	58.234	ENSECAG00000012679	RIF1	62	58.234	Equus_caballus
ENSKMAG00000002852	rif1	70	63.418	ENSELUG00000006826	rif1	64	60.501	Esox_lucius
ENSKMAG00000002852	rif1	67	49.373	ENSFCAG00000029742	RIF1	64	49.451	Felis_catus
ENSKMAG00000002852	rif1	99	61.257	ENSFHEG00000013721	rif1	99	60.989	Fundulus_heteroclitus
ENSKMAG00000002852	rif1	72	56.135	ENSGMOG00000003517	rif1	100	56.172	Gadus_morhua
ENSKMAG00000002852	rif1	96	77.801	ENSGAFG00000017196	rif1	93	75.500	Gambusia_affinis
ENSKMAG00000002852	rif1	94	55.073	ENSGACG00000008579	rif1	100	55.286	Gasterosteus_aculeatus
ENSKMAG00000002852	rif1	70	50.121	ENSGAGG00000012595	RIF1	84	44.346	Gopherus_agassizii
ENSKMAG00000002852	rif1	57	56.980	ENSGGOG00000040178	RIF1	57	56.980	Gorilla_gorilla
ENSKMAG00000002852	rif1	99	62.752	ENSHBUG00000007125	rif1	100	62.587	Haplochromis_burtoni
ENSKMAG00000002852	rif1	60	49.840	ENSHGLG00100009807	RIF1	62	49.960	Heterocephalus_glaber_male
ENSKMAG00000002852	rif1	80	62.883	ENSHCOG00000015943	rif1	73	61.654	Hippocampus_comes
ENSKMAG00000002852	rif1	69	61.213	ENSIPUG00000021703	rif1	75	55.888	Ictalurus_punctatus
ENSKMAG00000002852	rif1	67	50.591	ENSSTOG00000020712	RIF1	64	50.313	Ictidomys_tridecemlineatus
ENSKMAG00000002852	rif1	67	48.610	ENSJJAG00000023000	Rif1	65	48.502	Jaculus_jaculus
ENSKMAG00000002852	rif1	99	69.730	ENSLBEG00000023196	rif1	99	63.186	Labrus_bergylta
ENSKMAG00000002852	rif1	67	52.377	ENSLACG00000005425	RIF1	67	52.377	Latimeria_chalumnae
ENSKMAG00000002852	rif1	85	50.908	ENSLOCG00000002657	rif1	90	51.102	Lepisosteus_oculatus
ENSKMAG00000002852	rif1	53	49.685	ENSLAFG00000009796	RIF1	51	49.685	Loxodonta_africana
ENSKMAG00000002852	rif1	53	49.566	ENSMFAG00000032233	RIF1	63	49.566	Macaca_fascicularis
ENSKMAG00000002852	rif1	66	49.761	ENSMMUG00000008611	RIF1	63	49.761	Macaca_mulatta
ENSKMAG00000002852	rif1	53	49.487	ENSMNEG00000031616	RIF1	63	49.487	Macaca_nemestrina
ENSKMAG00000002852	rif1	53	49.566	ENSMLEG00000042945	RIF1	51	49.566	Mandrillus_leucophaeus
ENSKMAG00000002852	rif1	65	68.867	ENSMAMG00000001745	rif1	64	68.689	Mastacembelus_armatus
ENSKMAG00000002852	rif1	99	61.294	ENSMZEG00005020920	rif1	99	60.150	Maylandia_zebra
ENSKMAG00000002852	rif1	53	49.608	ENSMGAG00000012732	RIF1	55	49.961	Meleagris_gallopavo
ENSKMAG00000002852	rif1	62	61.157	ENSMAUG00000013158	Rif1	63	61.157	Mesocricetus_auratus
ENSKMAG00000002852	rif1	67	50.080	ENSMICG00000046127	RIF1	63	50.159	Microcebus_murinus
ENSKMAG00000002852	rif1	67	47.604	ENSMOCG00000009381	Rif1	52	47.504	Microtus_ochrogaster
ENSKMAG00000002852	rif1	99	54.331	ENSMMOG00000006519	rif1	99	54.082	Mola_mola
ENSKMAG00000002852	rif1	66	49.485	ENSMODG00000003703	RIF1	64	49.485	Monodelphis_domestica
ENSKMAG00000002852	rif1	80	62.698	ENSMALG00000016759	rif1	89	62.698	Monopterus_albus
ENSKMAG00000002852	rif1	70	46.280	MGP_PahariEiJ_G0025006	Rif1	68	46.328	Mus_pahari
ENSKMAG00000002852	rif1	71	48.487	MGP_SPRETEiJ_G0024476	Rif1	69	48.986	Mus_spretus
ENSKMAG00000002852	rif1	52	49.089	ENSMPUG00000000371	RIF1	50	49.443	Mustela_putorius_furo
ENSKMAG00000002852	rif1	55	47.698	ENSMLUG00000003376	RIF1	59	47.878	Myotis_lucifugus
ENSKMAG00000002852	rif1	99	61.340	ENSNBRG00000014257	rif1	100	61.132	Neolamprologus_brichardi
ENSKMAG00000002852	rif1	53	49.024	ENSNLEG00000010955	RIF1	52	49.024	Nomascus_leucogenys
ENSKMAG00000002852	rif1	68	47.436	ENSODEG00000003950	RIF1	79	42.875	Octodon_degus
ENSKMAG00000002852	rif1	99	62.877	ENSONIG00000013657	rif1	100	62.588	Oreochromis_niloticus
ENSKMAG00000002852	rif1	56	54.131	ENSOANG00000006078	-	55	54.131	Ornithorhynchus_anatinus
ENSKMAG00000002852	rif1	68	49.062	ENSOCUG00000017435	RIF1	64	48.984	Oryctolagus_cuniculus
ENSKMAG00000002852	rif1	99	56.723	ENSORLG00020001302	rif1	99	56.013	Oryzias_latipes_hni
ENSKMAG00000002852	rif1	99	56.362	ENSORLG00015000009	rif1	99	55.430	Oryzias_latipes_hsok
ENSKMAG00000002852	rif1	99	55.583	ENSOMEG00000021513	rif1	99	55.152	Oryzias_melastigma
ENSKMAG00000002852	rif1	67	49.328	ENSOGAG00000006141	RIF1	64	49.328	Otolemur_garnettii
ENSKMAG00000002852	rif1	53	50.236	ENSOARG00000008930	RIF1	51	50.236	Ovis_aries
ENSKMAG00000002852	rif1	67	49.134	ENSPPAG00000023754	RIF1	64	49.134	Pan_paniscus
ENSKMAG00000002852	rif1	67	49.451	ENSPPRG00000003618	RIF1	64	49.451	Panthera_pardus
ENSKMAG00000002852	rif1	67	49.451	ENSPTIG00000020652	RIF1	64	49.451	Panthera_tigris_altaica
ENSKMAG00000002852	rif1	67	49.213	ENSPTRG00000012534	RIF1	64	49.213	Pan_troglodytes
ENSKMAG00000002852	rif1	66	49.645	ENSPANG00000008525	RIF1	63	49.645	Papio_anubis
ENSKMAG00000002852	rif1	79	59.551	ENSPMGG00000016141	rif1	88	63.562	Periophthalmus_magnuspinnatus
ENSKMAG00000002852	rif1	67	49.406	ENSPCIG00000009185	RIF1	66	49.406	Phascolarctos_cinereus
ENSKMAG00000002852	rif1	92	61.507	ENSPFOG00000000554	-	99	61.500	Poecilia_formosa
ENSKMAG00000002852	rif1	99	62.988	ENSPFOG00000017804	rif1	99	62.900	Poecilia_formosa
ENSKMAG00000002852	rif1	99	61.039	ENSPLAG00000017945	rif1	99	60.870	Poecilia_latipinna
ENSKMAG00000002852	rif1	89	60.675	ENSPMEG00000006897	-	99	60.628	Poecilia_mexicana
ENSKMAG00000002852	rif1	90	78.938	ENSPREG00000018052	rif1	97	78.758	Poecilia_reticulata
ENSKMAG00000002852	rif1	67	49.568	ENSPPYG00000012846	RIF1	64	49.568	Pongo_abelii
ENSKMAG00000002852	rif1	67	49.880	ENSPCOG00000027888	RIF1	63	49.960	Propithecus_coquereli
ENSKMAG00000002852	rif1	57	58.351	ENSPVAG00000014276	RIF1	57	58.351	Pteropus_vampyrus
ENSKMAG00000002852	rif1	95	76.454	ENSPNYG00000012940	rif1	99	76.454	Pundamilia_nyererei
ENSKMAG00000002852	rif1	74	51.239	ENSPNAG00000016685	rif1	64	55.429	Pygocentrus_nattereri
ENSKMAG00000002852	rif1	50	50.500	ENSSBOG00000029530	RIF1	50	50.500	Saimiri_boliviensis_boliviensis
ENSKMAG00000002852	rif1	67	49.132	ENSSHAG00000018552	RIF1	65	49.132	Sarcophilus_harrisii
ENSKMAG00000002852	rif1	68	62.960	ENSSFOG00015021539	rif1	84	55.287	Scleropages_formosus
ENSKMAG00000002852	rif1	99	60.050	ENSSMAG00000011704	rif1	96	61.259	Scophthalmus_maximus
ENSKMAG00000002852	rif1	60	71.886	ENSSDUG00000015632	rif1	62	71.886	Seriola_dumerili
ENSKMAG00000002852	rif1	99	61.715	ENSSLDG00000019531	rif1	99	61.724	Seriola_lalandi_dorsalis
ENSKMAG00000002852	rif1	64	52.087	ENSSPUG00000003062	RIF1	71	50.501	Sphenodon_punctatus
ENSKMAG00000002852	rif1	64	73.747	ENSSPAG00000018359	rif1	98	73.347	Stegastes_partitus
ENSKMAG00000002852	rif1	67	50.197	ENSSSCG00000016395	RIF1	63	50.197	Sus_scrofa
ENSKMAG00000002852	rif1	99	56.506	ENSTRUG00000015808	rif1	99	56.100	Takifugu_rubripes
ENSKMAG00000002852	rif1	66	61.357	ENSTNIG00000011538	rif1	68	61.481	Tetraodon_nigroviridis
ENSKMAG00000002852	rif1	64	45.570	ENSTBEG00000016082	RIF1	60	45.570	Tupaia_belangeri
ENSKMAG00000002852	rif1	66	49.603	ENSTTRG00000011190	RIF1	62	49.603	Tursiops_truncatus
ENSKMAG00000002852	rif1	57	48.538	ENSUAMG00000026385	RIF1	59	48.538	Ursus_americanus
ENSKMAG00000002852	rif1	57	51.925	ENSUMAG00000000337	RIF1	63	49.528	Ursus_maritimus
ENSKMAG00000002852	rif1	72	49.681	ENSVPAG00000002162	RIF1	67	49.681	Vicugna_pacos
ENSKMAG00000002852	rif1	67	49.531	ENSVVUG00000011293	RIF1	64	49.531	Vulpes_vulpes
ENSKMAG00000002852	rif1	56	46.040	ENSXETG00000004530	rif1	63	42.773	Xenopus_tropicalis
ENSKMAG00000002852	rif1	97	58.392	ENSXMAG00000000506	rif1	99	58.914	Xiphophorus_maculatus