EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000002862 (Gene tree)
Gene ID: 108232329
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 2507 bases
Position: chrLWHD01000016.1:2602265-2604771
Accession: 108232329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003755	MMR_HSR1	PF01926.23	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003827	-	1860	XM_017410061	ENSKMAP00000003755	235 (aa)	XP_017265550	UPI0007F90446

Gene Model

Click here to download ENSKMAG00000002862's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000002862	zgc:101559	71	39.521	ENSKMAG00000017487	rab14	75	39.521
ENSKMAG00000002862	zgc:101559	69	44.512	ENSKMAG00000008625	RAB39B	75	44.512
ENSKMAG00000002862	zgc:101559	71	34.940	ENSKMAG00000018270	rab23	71	35.955
ENSKMAG00000002862	zgc:101559	77	45.000	ENSKMAG00000003494	si:dkey-16l2.16	81	45.000
ENSKMAG00000002862	zgc:101559	78	40.437	ENSKMAG00000005111	rab5aa	81	40.437
ENSKMAG00000002862	zgc:101559	73	39.766	ENSKMAG00000020038	rab5c	75	39.766
ENSKMAG00000002862	zgc:101559	81	45.000	ENSKMAG00000020034	-	80	44.492
ENSKMAG00000002862	zgc:101559	76	37.430	ENSKMAG00000015507	rab6ba	84	37.430
ENSKMAG00000002862	zgc:101559	68	38.415	ENSKMAG00000019964	rab9b	79	38.415
ENSKMAG00000002862	zgc:101559	70	38.235	ENSKMAG00000017150	-	74	38.235
ENSKMAG00000002862	zgc:101559	73	34.286	ENSKMAG00000017662	rab9a	85	34.286
ENSKMAG00000002862	zgc:101559	63	44.898	ENSKMAG00000001191	RAB15	69	44.898
ENSKMAG00000002862	zgc:101559	77	38.462	ENSKMAG00000006082	-	83	38.462
ENSKMAG00000002862	zgc:101559	79	62.694	ENSKMAG00000003105	rab33ba	86	61.084
ENSKMAG00000002862	zgc:101559	77	36.667	ENSKMAG00000001922	Ha-ras	92	36.667
ENSKMAG00000002862	zgc:101559	74	40.462	ENSKMAG00000006170	-	78	40.462
ENSKMAG00000002862	zgc:101559	85	34.123	ENSKMAG00000020250	rab4a	97	34.123
ENSKMAG00000002862	zgc:101559	85	36.816	ENSKMAG00000004945	rab25a	94	36.816
ENSKMAG00000002862	zgc:101559	71	39.535	ENSKMAG00000020013	-	81	39.535
ENSKMAG00000002862	zgc:101559	71	48.503	ENSKMAG00000004439	rab30	80	48.503
ENSKMAG00000002862	zgc:101559	71	47.024	ENSKMAG00000014038	-	77	47.024
ENSKMAG00000002862	zgc:101559	73	39.766	ENSKMAG00000017417	-	75	39.766
ENSKMAG00000002862	zgc:101559	73	39.205	ENSKMAG00000006812	RAB7A	82	39.205
ENSKMAG00000002862	zgc:101559	63	40.268	ENSKMAG00000018973	-	67	40.268
ENSKMAG00000002862	zgc:101559	63	43.243	ENSKMAG00000007267	rab42a	67	43.243
ENSKMAG00000002862	zgc:101559	71	46.429	ENSKMAG00000006810	rab1ba	81	46.429
ENSKMAG00000002862	zgc:101559	92	56.019	ENSKMAG00000006593	rab33a	94	58.416
ENSKMAG00000002862	zgc:101559	71	40.964	ENSKMAG00000015488	rab25b	77	40.964
ENSKMAG00000002862	zgc:101559	77	39.560	ENSKMAG00000011905	rab11a	84	39.560
ENSKMAG00000002862	zgc:101559	74	34.104	ENSKMAG00000017893	mras	81	34.104
ENSKMAG00000002862	zgc:101559	77	41.436	ENSKMAG00000001908	rab13	87	41.436
ENSKMAG00000002862	zgc:101559	63	41.497	ENSKMAG00000007364	rab18b	71	41.497
ENSKMAG00000002862	zgc:101559	63	35.135	ENSKMAG00000020448	rheb	79	35.135
ENSKMAG00000002862	zgc:101559	71	32.749	ENSKMAG00000011954	dnajc27	61	32.749
ENSKMAG00000002862	zgc:101559	71	47.024	ENSKMAG00000017357	rab1ab	80	47.024
ENSKMAG00000002862	zgc:101559	72	35.294	ENSKMAG00000003938	kras	92	33.333
ENSKMAG00000002862	zgc:101559	68	38.788	ENSKMAG00000021039	si:dkey-13a21.4	68	38.788
ENSKMAG00000002862	zgc:101559	71	40.351	ENSKMAG00000014705	rab22a	84	40.351
ENSKMAG00000002862	zgc:101559	77	45.109	ENSKMAG00000012657	-	80	45.109
ENSKMAG00000002862	zgc:101559	82	33.333	ENSKMAG00000017097	rasl11a	85	33.333
ENSKMAG00000002862	zgc:101559	74	39.306	ENSKMAG00000015516	rab11al	80	39.306
ENSKMAG00000002862	zgc:101559	71	38.922	ENSKMAG00000011301	-	75	38.922
ENSKMAG00000002862	zgc:101559	79	30.811	ENSKMAG00000020733	rras	87	31.073
ENSKMAG00000002862	zgc:101559	65	35.256	ENSKMAG00000003646	-	78	35.256
ENSKMAG00000002862	zgc:101559	63	36.486	ENSKMAG00000019397	rhebl1	79	36.486
ENSKMAG00000002862	zgc:101559	56	41.791	ENSKMAG00000019647	rab34a	50	41.791
ENSKMAG00000002862	zgc:101559	71	40.588	ENSKMAG00000012778	si:dkey-34d22.5	74	40.588
ENSKMAG00000002862	zgc:101559	77	39.011	ENSKMAG00000009033	rab11bb	83	39.011
ENSKMAG00000002862	zgc:101559	65	44.444	ENSKMAG00000002545	-	72	44.444
ENSKMAG00000002862	zgc:101559	51	30.328	ENSKMAG00000020210	arl4aa	62	30.328
ENSKMAG00000002862	zgc:101559	70	32.335	ENSKMAG00000000680	nkiras1	85	32.335
ENSKMAG00000002862	zgc:101559	81	36.318	ENSKMAG00000011278	rab6bb	94	36.318
ENSKMAG00000002862	zgc:101559	73	39.306	ENSKMAG00000020056	rab12	70	39.306
ENSKMAG00000002862	zgc:101559	83	39.796	ENSKMAG00000020392	rab15	90	39.796
ENSKMAG00000002862	zgc:101559	71	40.476	ENSKMAG00000009799	rab2a	77	40.476
ENSKMAG00000002862	zgc:101559	68	49.375	ENSKMAG00000006854	rab35b	97	41.624
ENSKMAG00000002862	zgc:101559	77	30.270	ENSKMAG00000012723	rabl2	79	30.270
ENSKMAG00000002862	zgc:101559	64	33.775	ENSKMAG00000003080	si:cabz01085950.1	74	33.775
ENSKMAG00000002862	zgc:101559	65	43.137	ENSKMAG00000013146	-	79	43.137
ENSKMAG00000002862	zgc:101559	70	48.171	ENSKMAG00000009856	zgc:171927	74	48.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002862	zgc:101559	100	82.553	ENSAPOG00000007503	zgc:101559	100	82.553	Acanthochromis_polyacanthus
ENSKMAG00000002862	zgc:101559	90	86.256	ENSACIG00000021459	zgc:101559	92	86.256	Amphilophus_citrinellus
ENSKMAG00000002862	zgc:101559	100	81.277	ENSAOCG00000024675	zgc:101559	100	81.277	Amphiprion_ocellaris
ENSKMAG00000002862	zgc:101559	100	81.277	ENSAPEG00000005176	zgc:101559	100	81.277	Amphiprion_percula
ENSKMAG00000002862	zgc:101559	100	80.000	ENSATEG00000007761	zgc:101559	100	80.000	Anabas_testudineus
ENSKMAG00000002862	zgc:101559	99	82.479	ENSACLG00000027006	zgc:101559	99	82.479	Astatotilapia_calliptera
ENSKMAG00000002862	zgc:101559	92	77.315	ENSAMXG00000040460	zgc:101559	85	77.315	Astyanax_mexicanus
ENSKMAG00000002862	zgc:101559	100	76.170	ENSCSEG00000006243	zgc:101559	100	76.170	Cynoglossus_semilaevis
ENSKMAG00000002862	zgc:101559	100	80.851	ENSCVAG00000019227	zgc:101559	100	80.851	Cyprinodon_variegatus
ENSKMAG00000002862	zgc:101559	89	79.048	ENSDARG00000003257	zgc:101559	90	79.048	Danio_rerio
ENSKMAG00000002862	zgc:101559	100	80.000	ENSFHEG00000011483	zgc:101559	100	80.000	Fundulus_heteroclitus
ENSKMAG00000002862	zgc:101559	91	79.439	ENSGMOG00000011665	zgc:101559	100	79.439	Gadus_morhua
ENSKMAG00000002862	zgc:101559	100	82.979	ENSGAFG00000021202	zgc:101559	100	82.979	Gambusia_affinis
ENSKMAG00000002862	zgc:101559	91	79.907	ENSGACG00000001725	zgc:101559	91	79.907	Gasterosteus_aculeatus
ENSKMAG00000002862	zgc:101559	100	82.553	ENSHBUG00000007827	zgc:101559	100	82.553	Haplochromis_burtoni
ENSKMAG00000002862	zgc:101559	100	73.729	ENSHCOG00000009133	zgc:101559	100	75.210	Hippocampus_comes
ENSKMAG00000002862	zgc:101559	87	76.585	ENSIPUG00000022394	zgc:101559	88	76.585	Ictalurus_punctatus
ENSKMAG00000002862	zgc:101559	100	81.702	ENSLBEG00000025798	zgc:101559	100	81.702	Labrus_bergylta
ENSKMAG00000002862	zgc:101559	86	69.802	ENSLACG00000011557	zgc:101559	87	69.802	Latimeria_chalumnae
ENSKMAG00000002862	zgc:101559	88	76.329	ENSLOCG00000005904	zgc:101559	88	76.329	Lepisosteus_oculatus
ENSKMAG00000002862	zgc:101559	100	80.426	ENSMAMG00000017431	zgc:101559	100	80.426	Mastacembelus_armatus
ENSKMAG00000002862	zgc:101559	100	82.553	ENSMZEG00005021778	zgc:101559	100	82.553	Maylandia_zebra
ENSKMAG00000002862	zgc:101559	100	77.872	ENSMMOG00000019779	zgc:101559	100	77.872	Mola_mola
ENSKMAG00000002862	zgc:101559	100	77.966	ENSMALG00000003712	zgc:101559	100	77.966	Monopterus_albus
ENSKMAG00000002862	zgc:101559	100	82.553	ENSNBRG00000002684	zgc:101559	100	82.553	Neolamprologus_brichardi
ENSKMAG00000002862	zgc:101559	100	82.553	ENSONIG00000006715	-	100	82.553	Oreochromis_niloticus
ENSKMAG00000002862	zgc:101559	100	78.298	ENSORLG00000030642	zgc:101559	100	78.298	Oryzias_latipes
ENSKMAG00000002862	zgc:101559	100	77.447	ENSORLG00020012685	zgc:101559	100	77.447	Oryzias_latipes_hni
ENSKMAG00000002862	zgc:101559	100	77.447	ENSORLG00015016047	zgc:101559	100	77.447	Oryzias_latipes_hsok
ENSKMAG00000002862	zgc:101559	100	79.149	ENSOMEG00000013128	zgc:101559	100	79.149	Oryzias_melastigma
ENSKMAG00000002862	zgc:101559	87	77.561	ENSPKIG00000013397	zgc:101559	86	77.561	Paramormyrops_kingsleyae
ENSKMAG00000002862	zgc:101559	100	82.979	ENSPFOG00000009101	-	100	82.979	Poecilia_formosa
ENSKMAG00000002862	zgc:101559	100	82.979	ENSPLAG00000020627	zgc:101559	100	82.979	Poecilia_latipinna
ENSKMAG00000002862	zgc:101559	100	82.979	ENSPMEG00000010152	zgc:101559	100	82.979	Poecilia_mexicana
ENSKMAG00000002862	zgc:101559	100	82.553	ENSPREG00000007017	zgc:101559	100	82.553	Poecilia_reticulata
ENSKMAG00000002862	zgc:101559	100	82.553	ENSPNYG00000012922	zgc:101559	100	82.553	Pundamilia_nyererei
ENSKMAG00000002862	zgc:101559	86	80.296	ENSPNAG00000017856	zgc:101559	88	80.296	Pygocentrus_nattereri
ENSKMAG00000002862	zgc:101559	87	77.451	ENSSFOG00015006175	zgc:101559	88	77.451	Scleropages_formosus
ENSKMAG00000002862	zgc:101559	98	78.448	ENSSMAG00000002229	zgc:101559	98	78.448	Scophthalmus_maximus
ENSKMAG00000002862	zgc:101559	100	81.702	ENSSDUG00000008151	zgc:101559	100	81.702	Seriola_dumerili
ENSKMAG00000002862	zgc:101559	100	81.702	ENSSLDG00000019214	zgc:101559	100	81.702	Seriola_lalandi_dorsalis
ENSKMAG00000002862	zgc:101559	100	81.277	ENSSPAG00000006404	zgc:101559	100	81.277	Stegastes_partitus
ENSKMAG00000002862	zgc:101559	100	76.170	ENSTRUG00000009903	zgc:101559	100	76.170	Takifugu_rubripes
ENSKMAG00000002862	zgc:101559	100	77.637	ENSTNIG00000015000	zgc:101559	100	77.637	Tetraodon_nigroviridis
ENSKMAG00000002862	zgc:101559	100	82.979	ENSXCOG00000018683	zgc:101559	100	82.979	Xiphophorus_couchianus
ENSKMAG00000002862	zgc:101559	100	83.830	ENSXMAG00000011171	zgc:101559	100	83.830	Xiphophorus_maculatus