EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000002963 (Gene tree)
Gene ID: 108237601
Gene Symbol: zbtb48
Alias: fd07a08|wu:fd07a08|wu:fe16d08
Full Name: zinc finger and BTB domain containing 48
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 14049 bases
Position: chrLWHD01000047.1:1110830-1124878
Accession: 108237601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000003873	zf-C2H2	PF00096.26	1.4e-38	1	6
ENSKMAP00000003873	zf-C2H2	PF00096.26	1.4e-38	2	6
ENSKMAP00000003873	zf-C2H2	PF00096.26	1.4e-38	3	6
ENSKMAP00000003873	zf-C2H2	PF00096.26	1.4e-38	4	6
ENSKMAP00000003873	zf-C2H2	PF00096.26	1.4e-38	5	6
ENSKMAP00000003873	zf-C2H2	PF00096.26	1.4e-38	6	6
ENSKMAP00000003873	zf-met	PF12874.7	0.00035	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000003948	-	2412	XM_017419140	ENSKMAP00000003873	719 (aa)	XP_017274629	UPI0007F8BE06

Gene Model

Click here to download ENSKMAG00000002963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000002963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000002963	zbtb48	54	35.252	ENSKMAG00000007658	-	99	36.364
ENSKMAG00000002963	zbtb48	50	40.441	ENSKMAG00000007657	-	64	40.708
ENSKMAG00000002963	zbtb48	58	41.176	ENSKMAG00000006231	-	89	46.154
ENSKMAG00000002963	zbtb48	73	34.259	ENSKMAG00000007892	-	76	33.724
ENSKMAG00000002963	zbtb48	52	38.095	ENSKMAG00000018636	-	81	38.095
ENSKMAG00000002963	zbtb48	59	37.294	ENSKMAG00000003186	-	97	37.294
ENSKMAG00000002963	zbtb48	58	38.372	ENSKMAG00000000520	-	56	38.372
ENSKMAG00000002963	zbtb48	57	36.131	ENSKMAG00000000529	-	65	36.686
ENSKMAG00000002963	zbtb48	53	31.613	ENSKMAG00000009015	-	83	31.613
ENSKMAG00000002963	zbtb48	56	33.333	ENSKMAG00000011031	-	75	33.578
ENSKMAG00000002963	zbtb48	63	33.778	ENSKMAG00000011441	-	90	33.778
ENSKMAG00000002963	zbtb48	65	35.045	ENSKMAG00000021184	-	90	35.217
ENSKMAG00000002963	zbtb48	52	36.777	ENSKMAG00000008319	-	74	36.777
ENSKMAG00000002963	zbtb48	82	39.583	ENSKMAG00000001453	-	55	39.583
ENSKMAG00000002963	zbtb48	52	35.043	ENSKMAG00000021817	znf236	72	35.043
ENSKMAG00000002963	zbtb48	60	39.801	ENSKMAG00000006633	-	66	39.801
ENSKMAG00000002963	zbtb48	51	32.884	ENSKMAG00000006392	-	87	31.678
ENSKMAG00000002963	zbtb48	51	31.515	ENSKMAG00000011202	-	53	31.515
ENSKMAG00000002963	zbtb48	62	37.195	ENSKMAG00000000795	-	99	37.224
ENSKMAG00000002963	zbtb48	52	37.681	ENSKMAG00000000718	-	99	37.681
ENSKMAG00000002963	zbtb48	55	39.713	ENSKMAG00000003940	-	98	38.769
ENSKMAG00000002963	zbtb48	50	39.062	ENSKMAG00000010903	-	58	38.400
ENSKMAG00000002963	zbtb48	55	38.652	ENSKMAG00000000073	-	92	38.496
ENSKMAG00000002963	zbtb48	50	36.749	ENSKMAG00000013663	prdm5	82	36.749
ENSKMAG00000002963	zbtb48	59	36.123	ENSKMAG00000001171	-	80	36.123
ENSKMAG00000002963	zbtb48	66	34.810	ENSKMAG00000012909	-	86	37.008
ENSKMAG00000002963	zbtb48	58	37.634	ENSKMAG00000000556	-	80	37.634
ENSKMAG00000002963	zbtb48	52	32.203	ENSKMAG00000007699	-	76	32.203
ENSKMAG00000002963	zbtb48	51	35.211	ENSKMAG00000012934	-	92	35.211
ENSKMAG00000002963	zbtb48	58	36.842	ENSKMAG00000000597	-	96	38.264
ENSKMAG00000002963	zbtb48	61	34.795	ENSKMAG00000005747	-	87	38.567
ENSKMAG00000002963	zbtb48	64	36.296	ENSKMAG00000018648	-	73	36.296
ENSKMAG00000002963	zbtb48	54	37.500	ENSKMAG00000016047	gfi1b	78	37.500
ENSKMAG00000002963	zbtb48	57	39.172	ENSKMAG00000021716	-	73	39.172
ENSKMAG00000002963	zbtb48	57	38.424	ENSKMAG00000002032	-	57	39.456
ENSKMAG00000002963	zbtb48	52	39.896	ENSKMAG00000000371	-	80	38.974
ENSKMAG00000002963	zbtb48	57	32.407	ENSKMAG00000000620	-	74	31.379
ENSKMAG00000002963	zbtb48	53	44.643	ENSKMAG00000009979	-	75	32.248
ENSKMAG00000002963	zbtb48	55	37.736	ENSKMAG00000000549	-	86	37.736
ENSKMAG00000002963	zbtb48	55	42.697	ENSKMAG00000000543	-	97	37.419
ENSKMAG00000002963	zbtb48	59	35.094	ENSKMAG00000006450	-	95	35.361
ENSKMAG00000002963	zbtb48	59	42.442	ENSKMAG00000003766	-	95	37.402
ENSKMAG00000002963	zbtb48	57	36.765	ENSKMAG00000011111	-	100	39.409
ENSKMAG00000002963	zbtb48	51	37.785	ENSKMAG00000015304	-	60	37.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000002963	zbtb48	83	87.705	ENSAPOG00000002861	zbtb48	98	87.705	Acanthochromis_polyacanthus
ENSKMAG00000002963	zbtb48	93	58.667	ENSAOCG00000008304	zbtb48	99	67.200	Amphiprion_ocellaris
ENSKMAG00000002963	zbtb48	99	64.220	ENSATEG00000024413	zbtb48	97	64.482	Anabas_testudineus
ENSKMAG00000002963	zbtb48	84	54.380	ENSCAPG00000012228	ZBTB48	55	68.908	Cavia_aperea
ENSKMAG00000002963	zbtb48	88	54.694	ENSDARG00000039263	zbtb48	87	55.022	Danio_rerio
ENSKMAG00000002963	zbtb48	86	50.553	ENSDORG00000009677	Zbtb48	52	68.347	Dipodomys_ordii
ENSKMAG00000002963	zbtb48	51	68.306	ENSFALG00000009796	ZBTB48	76	68.108	Ficedula_albicollis
ENSKMAG00000002963	zbtb48	76	64.573	ENSGALG00000000637	ZBTB48	74	71.765	Gallus_gallus
ENSKMAG00000002963	zbtb48	86	66.244	ENSGACG00000011187	zbtb48	100	65.197	Gasterosteus_aculeatus
ENSKMAG00000002963	zbtb48	94	51.528	ENSLBEG00000012151	zbtb48	99	72.034	Labrus_bergylta
ENSKMAG00000002963	zbtb48	55	65.707	ENSMGAG00000001275	ZBTB48	94	65.707	Meleagris_gallopavo
ENSKMAG00000002963	zbtb48	89	65.938	ENSMMOG00000014996	zbtb48	99	64.341	Mola_mola
ENSKMAG00000002963	zbtb48	88	64.861	ENSORLG00000019331	zbtb48	97	63.328	Oryzias_latipes
ENSKMAG00000002963	zbtb48	64	66.880	ENSORLG00020007790	zbtb48	77	66.808	Oryzias_latipes_hni
ENSKMAG00000002963	zbtb48	89	71.930	ENSORLG00015002568	zbtb48	66	71.930	Oryzias_latipes_hsok
ENSKMAG00000002963	zbtb48	91	63.650	ENSOMEG00000017762	zbtb48	99	62.632	Oryzias_melastigma
ENSKMAG00000002963	zbtb48	87	52.050	ENSPMGG00000019913	zbtb48	87	49.848	Periophthalmus_magnuspinnatus
ENSKMAG00000002963	zbtb48	52	65.796	ENSPVAG00000013020	ZBTB48	76	70.487	Pteropus_vampyrus
ENSKMAG00000002963	zbtb48	99	67.377	ENSSDUG00000004449	zbtb48	97	66.445	Seriola_dumerili
ENSKMAG00000002963	zbtb48	63	69.263	ENSSLDG00000017718	zbtb48	86	82.667	Seriola_lalandi_dorsalis
ENSKMAG00000002963	zbtb48	94	54.587	ENSSPUG00000011853	ZBTB48	95	54.587	Sphenodon_punctatus
ENSKMAG00000002963	zbtb48	51	68.033	ENSTGUG00000002589	ZBTB48	74	68.108	Taeniopygia_guttata
ENSKMAG00000002963	zbtb48	97	62.249	ENSTRUG00000008615	zbtb48	100	61.905	Takifugu_rubripes
ENSKMAG00000002963	zbtb48	86	66.250	ENSTNIG00000012449	zbtb48	99	65.102	Tetraodon_nigroviridis
ENSKMAG00000002963	zbtb48	75	52.650	ENSTBEG00000014014	ZBTB48	55	68.347	Tupaia_belangeri