EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003046 (Gene tree)
Gene ID: 108250327
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 13568 bases
Position: chrLWHD01000589.1:12751-26318
Accession: 108250327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004005	KH_1	PF00013.29	1.7e-54	1	3
ENSKMAP00000004005	KH_1	PF00013.29	1.7e-54	2	3
ENSKMAP00000004005	KH_1	PF00013.29	1.7e-54	3	3
ENSKMAP00000004025	KH_1	PF00013.29	1.9e-48	1	3
ENSKMAP00000004025	KH_1	PF00013.29	1.9e-48	2	3
ENSKMAP00000004025	KH_1	PF00013.29	1.9e-48	3	3
ENSKMAP00000004005	KH_2	PF07650.17	5.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004083	-	4577	XM_017440155	ENSKMAP00000004005	352 (aa)	XP_017295644	UPI0007F8D536
ENSKMAT00000004103	-	1170	-	ENSKMAP00000004025	389 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000003046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003046	pcbp3	93	63.664	ENSKMAG00000014252	pcbp4	89	55.782
ENSKMAG00000003046	pcbp3	94	72.059	ENSKMAG00000012031	PCBP2	96	72.059
ENSKMAG00000003046	pcbp3	62	41.538	ENSKMAG00000018579	khsrp	54	41.538
ENSKMAG00000003046	pcbp3	95	34.375	ENSKMAG00000012177	igf2bp2b	64	34.375
ENSKMAG00000003046	pcbp3	94	72.404	ENSKMAG00000011367	-	96	72.404
ENSKMAG00000003046	pcbp3	88	39.130	ENSKMAG00000021164	-	68	39.130
ENSKMAG00000003046	pcbp3	63	36.095	ENSKMAG00000015047	-	94	42.466
ENSKMAG00000003046	pcbp3	74	39.706	ENSKMAG00000014225	nova1	85	30.189
ENSKMAG00000003046	pcbp3	81	32.110	ENSKMAG00000016886	fubp3	63	38.462
ENSKMAG00000003046	pcbp3	93	63.690	ENSKMAG00000017554	-	97	56.231
ENSKMAG00000003046	pcbp3	68	35.802	ENSKMAG00000018897	fubp1	53	35.526
ENSKMAG00000003046	pcbp3	100	89.489	ENSKMAG00000018530	-	100	89.489
ENSKMAG00000003046	pcbp3	66	84.659	ENSKMAG00000016179	-	86	84.659
ENSKMAG00000003046	pcbp3	66	55.556	ENSKMAG00000020943	hnrnpk	56	55.556
ENSKMAG00000003046	pcbp3	74	50.000	ENSKMAG00000012225	hnrpkl	87	31.487
ENSKMAG00000003046	pcbp3	95	32.584	ENSKMAG00000019838	igf2bp3	67	32.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003046	pcbp3	100	90.909	ENSAPOG00000016582	-	100	90.909	Acanthochromis_polyacanthus
ENSKMAG00000003046	pcbp3	95	89.851	ENSAPOG00000020003	pcbp3	86	89.851	Acanthochromis_polyacanthus
ENSKMAG00000003046	pcbp3	93	87.021	ENSAMEG00000001697	-	96	87.021	Ailuropoda_melanoleuca
ENSKMAG00000003046	pcbp3	100	96.307	ENSACIG00000010933	pcbp3	100	96.307	Amphilophus_citrinellus
ENSKMAG00000003046	pcbp3	95	88.690	ENSACIG00000002739	-	97	88.690	Amphilophus_citrinellus
ENSKMAG00000003046	pcbp3	91	85.621	ENSAOCG00000007806	-	97	85.621	Amphiprion_ocellaris
ENSKMAG00000003046	pcbp3	97	90.643	ENSAOCG00000008592	-	100	90.643	Amphiprion_ocellaris
ENSKMAG00000003046	pcbp3	100	99.716	ENSAPEG00000008011	pcbp3	100	99.716	Amphiprion_percula
ENSKMAG00000003046	pcbp3	95	88.095	ENSAPEG00000005209	-	97	88.095	Amphiprion_percula
ENSKMAG00000003046	pcbp3	95	96.716	ENSATEG00000015787	-	100	96.716	Anabas_testudineus
ENSKMAG00000003046	pcbp3	95	87.798	ENSATEG00000009833	-	97	87.798	Anabas_testudineus
ENSKMAG00000003046	pcbp3	98	77.507	ENSAPLG00000008951	-	82	77.507	Anas_platyrhynchos
ENSKMAG00000003046	pcbp3	93	85.924	ENSAPLG00000002975	-	95	85.924	Anas_platyrhynchos
ENSKMAG00000003046	pcbp3	93	86.322	ENSACAG00000009819	-	95	86.322	Anolis_carolinensis
ENSKMAG00000003046	pcbp3	93	91.066	ENSACAG00000004607	-	96	91.066	Anolis_carolinensis
ENSKMAG00000003046	pcbp3	91	87.454	ENSANAG00000030702	-	96	87.454	Aotus_nancymaae
ENSKMAG00000003046	pcbp3	100	98.864	ENSACLG00000011835	pcbp3	100	98.864	Astatotilapia_calliptera
ENSKMAG00000003046	pcbp3	100	90.341	ENSACLG00000003801	-	100	90.341	Astatotilapia_calliptera
ENSKMAG00000003046	pcbp3	94	64.387	ENSAMXG00000001760	zgc:110045	81	57.828	Astyanax_mexicanus
ENSKMAG00000003046	pcbp3	100	96.875	ENSAMXG00000003440	pcbp3	100	96.875	Astyanax_mexicanus
ENSKMAG00000003046	pcbp3	95	85.373	ENSAMXG00000013588	-	100	85.373	Astyanax_mexicanus
ENSKMAG00000003046	pcbp3	88	87.302	ENSCAFG00020019472	-	83	85.477	Canis_lupus_dingo
ENSKMAG00000003046	pcbp3	93	88.754	ENSCSAG00000007440	-	87	88.754	Chlorocebus_sabaeus
ENSKMAG00000003046	pcbp3	98	87.204	ENSCPBG00000000733	-	72	87.204	Chrysemys_picta_bellii
ENSKMAG00000003046	pcbp3	98	85.507	ENSCPBG00000012151	-	95	85.507	Chrysemys_picta_bellii
ENSKMAG00000003046	pcbp3	95	72.222	ENSCSEG00000016984	-	97	76.036	Cynoglossus_semilaevis
ENSKMAG00000003046	pcbp3	95	88.657	ENSCSEG00000000822	pcbp3	95	93.103	Cynoglossus_semilaevis
ENSKMAG00000003046	pcbp3	100	90.341	ENSCVAG00000005262	-	100	90.341	Cyprinodon_variegatus
ENSKMAG00000003046	pcbp3	100	99.432	ENSCVAG00000014482	pcbp3	100	99.432	Cyprinodon_variegatus
ENSKMAG00000003046	pcbp3	100	97.159	ENSDARG00000054378	pcbp3	100	97.159	Danio_rerio
ENSKMAG00000003046	pcbp3	93	75.380	ENSETEG00000015988	-	95	75.380	Echinops_telfairi
ENSKMAG00000003046	pcbp3	91	68.836	ENSEBUG00000016192	pcbp3	99	68.836	Eptatretus_burgeri
ENSKMAG00000003046	pcbp3	95	74.041	ENSEBUG00000007485	-	94	72.874	Eptatretus_burgeri
ENSKMAG00000003046	pcbp3	70	67.470	ENSEBUG00000005495	pcbp3	68	67.470	Eptatretus_burgeri
ENSKMAG00000003046	pcbp3	100	98.023	ENSELUG00000003521	pcbp3	100	98.023	Esox_lucius
ENSKMAG00000003046	pcbp3	100	90.625	ENSELUG00000001560	-	100	82.920	Esox_lucius
ENSKMAG00000003046	pcbp3	98	77.778	ENSFALG00000004411	-	77	77.778	Ficedula_albicollis
ENSKMAG00000003046	pcbp3	93	88.450	ENSFALG00000003949	-	95	88.450	Ficedula_albicollis
ENSKMAG00000003046	pcbp3	95	87.500	ENSFHEG00000006539	-	97	87.500	Fundulus_heteroclitus
ENSKMAG00000003046	pcbp3	97	88.012	ENSFHEG00000016615	pcbp3	97	88.012	Fundulus_heteroclitus
ENSKMAG00000003046	pcbp3	95	67.139	ENSGMOG00000008611	-	100	67.139	Gadus_morhua
ENSKMAG00000003046	pcbp3	95	76.124	ENSGMOG00000011992	pcbp3	96	76.190	Gadus_morhua
ENSKMAG00000003046	pcbp3	93	88.184	ENSGALG00000004394	-	96	88.184	Gallus_gallus
ENSKMAG00000003046	pcbp3	93	86.544	ENSGALG00000013155	-	98	83.384	Gallus_gallus
ENSKMAG00000003046	pcbp3	95	94.925	ENSGAFG00000011430	pcbp3	96	94.925	Gambusia_affinis
ENSKMAG00000003046	pcbp3	100	90.341	ENSGAFG00000010274	-	100	90.341	Gambusia_affinis
ENSKMAG00000003046	pcbp3	95	83.569	ENSGACG00000014955	-	97	83.569	Gasterosteus_aculeatus
ENSKMAG00000003046	pcbp3	96	84.463	ENSGACG00000002266	-	97	84.463	Gasterosteus_aculeatus
ENSKMAG00000003046	pcbp3	76	88.263	ENSGAGG00000006956	-	97	84.615	Gopherus_agassizii
ENSKMAG00000003046	pcbp3	94	80.608	ENSGAGG00000000271	-	100	80.822	Gopherus_agassizii
ENSKMAG00000003046	pcbp3	100	90.341	ENSHBUG00000021782	-	100	90.341	Haplochromis_burtoni
ENSKMAG00000003046	pcbp3	100	98.864	ENSHBUG00000010697	pcbp3	100	98.864	Haplochromis_burtoni
ENSKMAG00000003046	pcbp3	95	85.417	ENSHCOG00000006067	-	97	85.417	Hippocampus_comes
ENSKMAG00000003046	pcbp3	100	99.148	ENSHCOG00000017868	pcbp3	100	99.148	Hippocampus_comes
ENSKMAG00000003046	pcbp3	95	95.833	ENSIPUG00000006238	pcbp3	97	95.833	Ictalurus_punctatus
ENSKMAG00000003046	pcbp3	96	88.757	ENSLBEG00000006201	pcbp3	96	88.757	Labrus_bergylta
ENSKMAG00000003046	pcbp3	100	77.273	ENSLBEG00000006542	-	100	79.545	Labrus_bergylta
ENSKMAG00000003046	pcbp3	97	85.753	ENSLACG00000010386	pcbp3	77	85.753	Latimeria_chalumnae
ENSKMAG00000003046	pcbp3	98	77.596	ENSLACG00000010804	zgc:110045	77	77.596	Latimeria_chalumnae
ENSKMAG00000003046	pcbp3	93	95.745	ENSLOCG00000009369	pcbp3	96	95.745	Lepisosteus_oculatus
ENSKMAG00000003046	pcbp3	93	85.714	ENSLOCG00000005058	zgc:110045	80	85.714	Lepisosteus_oculatus
ENSKMAG00000003046	pcbp3	95	86.607	ENSMAMG00000011620	-	97	86.607	Mastacembelus_armatus
ENSKMAG00000003046	pcbp3	95	89.552	ENSMAMG00000022336	pcbp3	93	89.552	Mastacembelus_armatus
ENSKMAG00000003046	pcbp3	100	96.023	ENSMZEG00005008993	pcbp3	100	96.023	Maylandia_zebra
ENSKMAG00000003046	pcbp3	100	86.932	ENSMZEG00005014882	-	100	87.042	Maylandia_zebra
ENSKMAG00000003046	pcbp3	94	80.460	ENSMGAG00000001883	-	96	80.460	Meleagris_gallopavo
ENSKMAG00000003046	pcbp3	98	77.778	ENSMGAG00000006794	-	77	77.778	Meleagris_gallopavo
ENSKMAG00000003046	pcbp3	95	87.202	ENSMMOG00000005216	-	97	87.202	Mola_mola
ENSKMAG00000003046	pcbp3	95	88.724	ENSMMOG00000000730	pcbp3	88	88.724	Mola_mola
ENSKMAG00000003046	pcbp3	72	86.449	ENSMODG00000027884	-	93	86.449	Monodelphis_domestica
ENSKMAG00000003046	pcbp3	100	96.875	ENSMALG00000000691	pcbp3	100	96.875	Monopterus_albus
ENSKMAG00000003046	pcbp3	93	78.386	ENSMPUG00000001779	-	88	78.386	Mustela_putorius_furo
ENSKMAG00000003046	pcbp3	100	96.023	ENSNBRG00000016409	-	100	96.023	Neolamprologus_brichardi
ENSKMAG00000003046	pcbp3	100	89.385	ENSNBRG00000016714	-	100	89.385	Neolamprologus_brichardi
ENSKMAG00000003046	pcbp3	93	87.826	ENSOPRG00000003431	-	99	87.826	Ochotona_princeps
ENSKMAG00000003046	pcbp3	95	93.768	ENSONIG00000012122	-	98	93.768	Oreochromis_niloticus
ENSKMAG00000003046	pcbp3	95	89.583	ENSONIG00000004611	-	97	89.583	Oreochromis_niloticus
ENSKMAG00000003046	pcbp3	93	88.146	ENSOCUG00000002696	-	87	88.146	Oryctolagus_cuniculus
ENSKMAG00000003046	pcbp3	95	92.239	ENSORLG00000000059	pcbp3	100	92.239	Oryzias_latipes
ENSKMAG00000003046	pcbp3	99	89.744	ENSORLG00000022739	-	99	89.744	Oryzias_latipes
ENSKMAG00000003046	pcbp3	99	89.459	ENSORLG00020006124	-	99	89.459	Oryzias_latipes_hni
ENSKMAG00000003046	pcbp3	95	92.239	ENSORLG00020012671	pcbp3	97	92.239	Oryzias_latipes_hni
ENSKMAG00000003046	pcbp3	95	92.239	ENSORLG00015000429	pcbp3	97	92.239	Oryzias_latipes_hsok
ENSKMAG00000003046	pcbp3	99	89.744	ENSORLG00015008051	-	99	89.744	Oryzias_latipes_hsok
ENSKMAG00000003046	pcbp3	91	90.523	ENSOMEG00000020811	pcbp3	97	90.523	Oryzias_melastigma
ENSKMAG00000003046	pcbp3	95	89.286	ENSOMEG00000020162	-	97	89.286	Oryzias_melastigma
ENSKMAG00000003046	pcbp3	93	82.486	ENSOGAG00000008044	-	96	82.486	Otolemur_garnettii
ENSKMAG00000003046	pcbp3	100	89.773	ENSPKIG00000019329	pcbp3	100	89.773	Paramormyrops_kingsleyae
ENSKMAG00000003046	pcbp3	76	79.524	ENSPKIG00000020913	-	92	82.126	Paramormyrops_kingsleyae
ENSKMAG00000003046	pcbp3	93	77.616	ENSPSIG00000014970	-	95	78.198	Pelodiscus_sinensis
ENSKMAG00000003046	pcbp3	94	80.608	ENSPSIG00000008350	-	72	80.608	Pelodiscus_sinensis
ENSKMAG00000003046	pcbp3	100	98.295	ENSPMGG00000022383	pcbp3	100	98.295	Periophthalmus_magnuspinnatus
ENSKMAG00000003046	pcbp3	69	89.362	ENSPMAG00000004637	-	97	89.362	Petromyzon_marinus
ENSKMAG00000003046	pcbp3	95	68.843	ENSPMAG00000004551	pcbp3	90	68.843	Petromyzon_marinus
ENSKMAG00000003046	pcbp3	93	95.441	ENSPCIG00000028092	-	96	95.441	Phascolarctos_cinereus
ENSKMAG00000003046	pcbp3	100	83.750	ENSPLAG00000011449	pcbp3	100	83.750	Poecilia_latipinna
ENSKMAG00000003046	pcbp3	94	84.548	ENSPLAG00000004074	-	89	84.548	Poecilia_latipinna
ENSKMAG00000003046	pcbp3	100	88.068	ENSPMEG00000006653	-	100	88.068	Poecilia_mexicana
ENSKMAG00000003046	pcbp3	100	98.310	ENSPMEG00000021239	pcbp3	100	98.310	Poecilia_mexicana
ENSKMAG00000003046	pcbp3	95	87.834	ENSPREG00000015736	pcbp3	99	87.834	Poecilia_reticulata
ENSKMAG00000003046	pcbp3	95	87.202	ENSPREG00000020585	-	97	87.202	Poecilia_reticulata
ENSKMAG00000003046	pcbp3	95	87.202	ENSPNYG00000013205	-	97	87.202	Pundamilia_nyererei
ENSKMAG00000003046	pcbp3	95	89.552	ENSPNYG00000012326	pcbp3	95	89.552	Pundamilia_nyererei
ENSKMAG00000003046	pcbp3	100	94.051	ENSPNAG00000008541	-	100	94.051	Pygocentrus_nattereri
ENSKMAG00000003046	pcbp3	95	90.179	ENSPNAG00000015104	pcbp3	97	90.179	Pygocentrus_nattereri
ENSKMAG00000003046	pcbp3	93	88.754	ENSRNOG00000001245	Pcbp3	95	88.754	Rattus_norvegicus
ENSKMAG00000003046	pcbp3	93	79.666	ENSRBIG00000028177	-	96	79.666	Rhinopithecus_bieti
ENSKMAG00000003046	pcbp3	93	84.900	ENSSHAG00000007890	-	96	83.862	Sarcophilus_harrisii
ENSKMAG00000003046	pcbp3	100	90.341	ENSSFOG00015010205	pcbp3	100	94.328	Scleropages_formosus
ENSKMAG00000003046	pcbp3	100	94.602	ENSSFOG00015014706	pcbp3	100	94.602	Scleropages_formosus
ENSKMAG00000003046	pcbp3	93	78.287	ENSSFOG00015007118	-	93	78.287	Scleropages_formosus
ENSKMAG00000003046	pcbp3	95	89.851	ENSSMAG00000011929	pcbp3	97	89.851	Scophthalmus_maximus
ENSKMAG00000003046	pcbp3	100	90.057	ENSSMAG00000003135	-	100	90.057	Scophthalmus_maximus
ENSKMAG00000003046	pcbp3	100	89.205	ENSSDUG00000008502	-	100	89.205	Seriola_dumerili
ENSKMAG00000003046	pcbp3	95	97.015	ENSSDUG00000011608	pcbp3	99	97.015	Seriola_dumerili
ENSKMAG00000003046	pcbp3	100	90.909	ENSSLDG00000020161	-	100	90.909	Seriola_lalandi_dorsalis
ENSKMAG00000003046	pcbp3	95	97.015	ENSSLDG00000008518	pcbp3	99	97.015	Seriola_lalandi_dorsalis
ENSKMAG00000003046	pcbp3	91	84.880	ENSSPUG00000013214	-	91	84.880	Sphenodon_punctatus
ENSKMAG00000003046	pcbp3	100	86.080	ENSSPAG00000023341	-	100	86.080	Stegastes_partitus
ENSKMAG00000003046	pcbp3	91	85.621	ENSSPAG00000004190	-	97	85.621	Stegastes_partitus
ENSKMAG00000003046	pcbp3	93	82.675	ENSTGUG00000008158	-	96	82.675	Taeniopygia_guttata
ENSKMAG00000003046	pcbp3	93	81.268	ENSTGUG00000003316	-	96	81.268	Taeniopygia_guttata
ENSKMAG00000003046	pcbp3	91	89.109	ENSTRUG00000006280	-	89	89.109	Takifugu_rubripes
ENSKMAG00000003046	pcbp3	100	92.614	ENSTRUG00000013604	pcbp3	100	92.614	Takifugu_rubripes
ENSKMAG00000003046	pcbp3	93	88.473	ENSTTRG00000015075	-	96	88.473	Tursiops_truncatus
ENSKMAG00000003046	pcbp3	95	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSKMAG00000003046	pcbp3	93	83.285	ENSXETG00000011483	pcbp1	96	83.285	Xenopus_tropicalis
ENSKMAG00000003046	pcbp3	100	98.310	ENSXCOG00000020481	pcbp3	100	98.310	Xiphophorus_couchianus
ENSKMAG00000003046	pcbp3	100	99.716	ENSXMAG00000008175	pcbp3	100	99.716	Xiphophorus_maculatus
ENSKMAG00000003046	pcbp3	100	90.625	ENSXMAG00000028711	-	100	90.625	Xiphophorus_maculatus