EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003154 (Gene tree)
Gene ID: 108244507
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 9753 bases
Position: chrLWHD01000143.1:1099709-1109461
Accession: 108244507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004126	RRM_1	PF00076.22	5.2e-42	1	4
ENSKMAP00000004126	RRM_1	PF00076.22	5.2e-42	2	4
ENSKMAP00000004126	RRM_1	PF00076.22	5.2e-42	3	4
ENSKMAP00000004126	RRM_1	PF00076.22	5.2e-42	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004205	-	2884	XM_017430766	ENSKMAP00000004126	458 (aa)	XP_017286255	UPI000D52F8B6

Gene Model

Click here to download ENSKMAG00000003154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003154	-	84	40.674	ENSKMAG00000008111	ncl	58	39.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003154	-	86	48.544	ENSACIG00000021941	-	89	48.544	Amphilophus_citrinellus
ENSKMAG00000003154	-	84	50.000	ENSACLG00000009613	-	93	50.000	Astatotilapia_calliptera
ENSKMAG00000003154	-	88	54.177	ENSCSEG00000017388	-	79	54.197	Cynoglossus_semilaevis
ENSKMAG00000003154	-	86	64.987	ENSFHEG00000017265	-	84	64.987	Fundulus_heteroclitus
ENSKMAG00000003154	-	85	41.579	ENSGMOG00000017831	-	96	42.408	Gadus_morhua
ENSKMAG00000003154	-	93	58.257	ENSGAFG00000018408	-	89	58.257	Gambusia_affinis
ENSKMAG00000003154	-	84	49.872	ENSHBUG00000006683	-	94	49.872	Haplochromis_burtoni
ENSKMAG00000003154	-	90	51.905	ENSHCOG00000020361	-	98	51.905	Hippocampus_comes
ENSKMAG00000003154	-	84	50.388	ENSMZEG00005005300	-	94	50.388	Maylandia_zebra
ENSKMAG00000003154	-	84	54.922	ENSMMOG00000018095	-	91	54.453	Mola_mola
ENSKMAG00000003154	-	86	51.097	ENSMALG00000006207	-	77	51.097	Monopterus_albus
ENSKMAG00000003154	-	84	49.492	ENSPMGG00000013705	-	94	50.255	Periophthalmus_magnuspinnatus
ENSKMAG00000003154	-	87	59.666	ENSPFOG00000016767	-	95	57.512	Poecilia_formosa
ENSKMAG00000003154	-	92	58.864	ENSPLAG00000000597	-	88	58.864	Poecilia_latipinna
ENSKMAG00000003154	-	90	59.122	ENSPMEG00000004046	-	88	59.122	Poecilia_mexicana
ENSKMAG00000003154	-	87	60.337	ENSPREG00000007170	-	91	59.397	Poecilia_reticulata
ENSKMAG00000003154	-	84	52.073	ENSPNYG00000000391	-	94	52.073	Pundamilia_nyererei
ENSKMAG00000003154	-	94	50.904	ENSTRUG00000023880	-	80	50.904	Takifugu_rubripes
ENSKMAG00000003154	-	93	59.862	ENSXMAG00000004403	-	89	59.862	Xiphophorus_maculatus