EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000003287 (Gene tree)
Gene ID: 108245321
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 57579 bases
Position: chrLWHD01000004.1:8124831-8182409
Accession: 108245321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004311	PPR	PF01535.20	3.6e-27	1	4
ENSKMAP00000004311	PPR	PF01535.20	3.6e-27	2	4
ENSKMAP00000004311	PPR	PF01535.20	3.6e-27	3	4
ENSKMAP00000004311	PPR	PF01535.20	3.6e-27	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004394	-	5554	XM_017432147	ENSKMAP00000004311	1644 (aa)	XP_017287636	-

Gene Model

Click here to download ENSKMAG00000003287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003287	lrpprc	85	65.057	ENSAPOG00000016610	lrpprc	99	65.057	Acanthochromis_polyacanthus
ENSKMAG00000003287	lrpprc	81	48.563	ENSAMEG00000005852	LRPPRC	98	48.563	Ailuropoda_melanoleuca
ENSKMAG00000003287	lrpprc	85	61.823	ENSACIG00000009604	lrpprc	98	61.823	Amphilophus_citrinellus
ENSKMAG00000003287	lrpprc	85	65.390	ENSAOCG00000005886	lrpprc	99	65.390	Amphiprion_ocellaris
ENSKMAG00000003287	lrpprc	85	61.834	ENSAPEG00000002937	lrpprc	97	61.834	Amphiprion_percula
ENSKMAG00000003287	lrpprc	75	71.365	ENSATEG00000010555	lrpprc	95	71.365	Anabas_testudineus
ENSKMAG00000003287	lrpprc	82	51.180	ENSACAG00000029278	LRPPRC	96	51.098	Anolis_carolinensis
ENSKMAG00000003287	lrpprc	82	48.675	ENSANAG00000027440	LRPPRC	96	48.748	Aotus_nancymaae
ENSKMAG00000003287	lrpprc	83	60.933	ENSACLG00000023712	lrpprc	99	60.933	Astatotilapia_calliptera
ENSKMAG00000003287	lrpprc	82	47.979	ENSCJAG00000000794	LRPPRC	96	48.454	Callithrix_jacchus
ENSKMAG00000003287	lrpprc	84	47.664	ENSCHIG00000020173	LRPPRC	98	48.220	Capra_hircus
ENSKMAG00000003287	lrpprc	81	37.042	ENSCAPG00000013631	LRPPRC	99	37.042	Cavia_aperea
ENSKMAG00000003287	lrpprc	74	46.420	ENSCPOG00000000204	LRPPRC	99	46.420	Cavia_porcellus
ENSKMAG00000003287	lrpprc	82	48.389	ENSCCAG00000031900	LRPPRC	91	55.809	Cebus_capucinus
ENSKMAG00000003287	lrpprc	82	48.233	ENSCATG00000014187	LRPPRC	89	56.329	Cercocebus_atys
ENSKMAG00000003287	lrpprc	81	47.306	ENSCLAG00000005203	LRPPRC	96	47.306	Chinchilla_lanigera
ENSKMAG00000003287	lrpprc	82	48.164	ENSCSAG00000013233	LRPPRC	96	48.091	Chlorocebus_sabaeus
ENSKMAG00000003287	lrpprc	70	47.339	ENSCHOG00000003631	LRPPRC	83	47.339	Choloepus_hoffmanni
ENSKMAG00000003287	lrpprc	81	46.667	ENSCANG00000034961	LRPPRC	99	54.839	Colobus_angolensis_palliatus
ENSKMAG00000003287	lrpprc	82	48.099	ENSCGRG00001016261	Lrpprc	99	47.564	Cricetulus_griseus_chok1gshd
ENSKMAG00000003287	lrpprc	82	48.099	ENSCGRG00000004072	Lrpprc	99	47.564	Cricetulus_griseus_crigri
ENSKMAG00000003287	lrpprc	85	48.549	ENSCSEG00000003850	lrpprc	92	54.082	Cynoglossus_semilaevis
ENSKMAG00000003287	lrpprc	85	67.972	ENSCVAG00000012967	lrpprc	99	67.972	Cyprinodon_variegatus
ENSKMAG00000003287	lrpprc	85	53.136	ENSDARG00000043970	lrpprc	97	53.136	Danio_rerio
ENSKMAG00000003287	lrpprc	81	48.255	ENSDNOG00000012594	-	96	48.373	Dasypus_novemcinctus
ENSKMAG00000003287	lrpprc	66	38.818	ENSDNOG00000032336	-	95	38.818	Dasypus_novemcinctus
ENSKMAG00000003287	lrpprc	82	47.938	ENSDORG00000012233	Lrpprc	96	47.938	Dipodomys_ordii
ENSKMAG00000003287	lrpprc	81	49.110	ENSETEG00000006657	LRPPRC	96	49.110	Echinops_telfairi
ENSKMAG00000003287	lrpprc	63	51.970	ENSEEUG00000012340	LRPPRC	80	51.970	Erinaceus_europaeus
ENSKMAG00000003287	lrpprc	82	53.255	ENSELUG00000012803	lrpprc	99	53.255	Esox_lucius
ENSKMAG00000003287	lrpprc	82	49.595	ENSFCAG00000013468	LRPPRC	96	49.595	Felis_catus
ENSKMAG00000003287	lrpprc	82	45.944	ENSFALG00000012738	LRPPRC	99	45.944	Ficedula_albicollis
ENSKMAG00000003287	lrpprc	80	46.742	ENSFDAG00000015328	LRPPRC	93	46.742	Fukomys_damarensis
ENSKMAG00000003287	lrpprc	85	66.096	ENSFHEG00000019604	lrpprc	99	66.096	Fundulus_heteroclitus
ENSKMAG00000003287	lrpprc	82	57.650	ENSGMOG00000008337	lrpprc	97	57.650	Gadus_morhua
ENSKMAG00000003287	lrpprc	84	66.547	ENSGAFG00000001455	lrpprc	98	66.547	Gambusia_affinis
ENSKMAG00000003287	lrpprc	85	60.582	ENSGACG00000010679	lrpprc	99	62.906	Gasterosteus_aculeatus
ENSKMAG00000003287	lrpprc	85	66.003	ENSHBUG00000000393	lrpprc	96	66.003	Haplochromis_burtoni
ENSKMAG00000003287	lrpprc	84	46.143	ENSHGLG00000006123	LRPPRC	98	46.143	Heterocephalus_glaber_female
ENSKMAG00000003287	lrpprc	51	44.260	ENSHGLG00100005960	-	99	44.260	Heterocephalus_glaber_male
ENSKMAG00000003287	lrpprc	84	62.023	ENSHCOG00000002107	lrpprc	99	62.023	Hippocampus_comes
ENSKMAG00000003287	lrpprc	84	55.587	ENSIPUG00000009406	lrpprc	97	55.446	Ictalurus_punctatus
ENSKMAG00000003287	lrpprc	82	47.553	ENSSTOG00000011185	LRPPRC	97	47.553	Ictidomys_tridecemlineatus
ENSKMAG00000003287	lrpprc	81	47.774	ENSJJAG00000020475	Lrpprc	99	46.978	Jaculus_jaculus
ENSKMAG00000003287	lrpprc	85	56.476	ENSLBEG00000023225	lrpprc	92	65.182	Labrus_bergylta
ENSKMAG00000003287	lrpprc	85	51.911	ENSLACG00000014030	LRPPRC	99	51.911	Latimeria_chalumnae
ENSKMAG00000003287	lrpprc	84	55.429	ENSLOCG00000016390	lrpprc	95	55.429	Lepisosteus_oculatus
ENSKMAG00000003287	lrpprc	82	46.686	ENSLAFG00000008614	LRPPRC	96	46.686	Loxodonta_africana
ENSKMAG00000003287	lrpprc	82	47.985	ENSMFAG00000041560	LRPPRC	99	55.016	Macaca_fascicularis
ENSKMAG00000003287	lrpprc	82	47.724	ENSMMUG00000019841	LRPPRC	99	55.340	Macaca_mulatta
ENSKMAG00000003287	lrpprc	82	48.132	ENSMNEG00000031613	LRPPRC	89	56.540	Macaca_nemestrina
ENSKMAG00000003287	lrpprc	83	56.345	ENSMAMG00000021835	lrpprc	97	56.619	Mastacembelus_armatus
ENSKMAG00000003287	lrpprc	85	66.074	ENSMZEG00005027379	lrpprc	98	66.074	Maylandia_zebra
ENSKMAG00000003287	lrpprc	83	47.750	ENSMAUG00000012118	Lrpprc	99	48.030	Mesocricetus_auratus
ENSKMAG00000003287	lrpprc	84	47.599	ENSMICG00000010486	LRPPRC	94	52.165	Microcebus_murinus
ENSKMAG00000003287	lrpprc	84	47.911	ENSMOCG00000006048	Lrpprc	98	47.911	Microtus_ochrogaster
ENSKMAG00000003287	lrpprc	85	59.829	ENSMMOG00000007830	lrpprc	90	69.043	Mola_mola
ENSKMAG00000003287	lrpprc	81	48.176	ENSMODG00000000648	LRPPRC	98	48.176	Monodelphis_domestica
ENSKMAG00000003287	lrpprc	86	62.885	ENSMALG00000001271	lrpprc	98	63.675	Monopterus_albus
ENSKMAG00000003287	lrpprc	82	48.178	ENSMPUG00000011800	LRPPRC	97	49.957	Mustela_putorius_furo
ENSKMAG00000003287	lrpprc	82	48.507	ENSMLUG00000010575	LRPPRC	97	48.507	Myotis_lucifugus
ENSKMAG00000003287	lrpprc	84	47.155	ENSNGAG00000013069	Lrpprc	99	47.189	Nannospalax_galili
ENSKMAG00000003287	lrpprc	81	59.492	ENSNBRG00000013202	lrpprc	100	59.492	Neolamprologus_brichardi
ENSKMAG00000003287	lrpprc	84	46.567	ENSNLEG00000016782	LRPPRC	96	52.381	Nomascus_leucogenys
ENSKMAG00000003287	lrpprc	75	54.098	ENSOPRG00000016774	LRPPRC	89	54.098	Ochotona_princeps
ENSKMAG00000003287	lrpprc	82	48.105	ENSODEG00000011211	LRPPRC	97	48.105	Octodon_degus
ENSKMAG00000003287	lrpprc	85	66.145	ENSONIG00000000917	lrpprc	99	65.125	Oreochromis_niloticus
ENSKMAG00000003287	lrpprc	64	43.918	ENSOANG00000014670	-	100	44.359	Ornithorhynchus_anatinus
ENSKMAG00000003287	lrpprc	82	47.414	ENSOCUG00000015046	LRPPRC	93	47.487	Oryctolagus_cuniculus
ENSKMAG00000003287	lrpprc	85	63.675	ENSORLG00000004605	lrpprc	99	61.189	Oryzias_latipes
ENSKMAG00000003287	lrpprc	79	66.540	ENSORLG00020012536	lrpprc	99	66.111	Oryzias_latipes_hni
ENSKMAG00000003287	lrpprc	85	62.145	ENSORLG00015018270	lrpprc	85	76.782	Oryzias_latipes_hsok
ENSKMAG00000003287	lrpprc	82	48.135	ENSOGAG00000012798	LRPPRC	97	48.135	Otolemur_garnettii
ENSKMAG00000003287	lrpprc	82	48.378	ENSOARG00000006522	LRPPRC	98	47.735	Ovis_aries
ENSKMAG00000003287	lrpprc	82	47.291	ENSPPAG00000040876	LRPPRC	89	56.144	Pan_paniscus
ENSKMAG00000003287	lrpprc	82	49.596	ENSPPRG00000006578	LRPPRC	96	49.596	Panthera_pardus
ENSKMAG00000003287	lrpprc	82	49.521	ENSPTIG00000000933	LRPPRC	96	49.521	Panthera_tigris_altaica
ENSKMAG00000003287	lrpprc	82	47.762	ENSPTRG00000011880	LRPPRC	89	56.025	Pan_troglodytes
ENSKMAG00000003287	lrpprc	82	47.651	ENSPANG00000020731	LRPPRC	89	55.907	Papio_anubis
ENSKMAG00000003287	lrpprc	81	46.701	ENSPKIG00000022232	lrpprc	98	50.262	Paramormyrops_kingsleyae
ENSKMAG00000003287	lrpprc	53	48.914	ENSPSIG00000006830	-	99	48.914	Pelodiscus_sinensis
ENSKMAG00000003287	lrpprc	58	53.958	ENSPMGG00000016597	lrpprc	98	53.958	Periophthalmus_magnuspinnatus
ENSKMAG00000003287	lrpprc	80	44.293	ENSPMAG00000002147	lrpprc	99	44.293	Petromyzon_marinus
ENSKMAG00000003287	lrpprc	85	66.165	ENSPFOG00000011227	lrpprc	99	66.165	Poecilia_formosa
ENSKMAG00000003287	lrpprc	85	65.806	ENSPLAG00000004018	lrpprc	99	65.806	Poecilia_latipinna
ENSKMAG00000003287	lrpprc	85	66.308	ENSPMEG00000016425	lrpprc	99	66.308	Poecilia_mexicana
ENSKMAG00000003287	lrpprc	84	65.445	ENSPREG00000003662	lrpprc	98	65.445	Poecilia_reticulata
ENSKMAG00000003287	lrpprc	66	51.744	ENSPCAG00000001430	LRPPRC	83	49.383	Procavia_capensis
ENSKMAG00000003287	lrpprc	82	46.798	ENSPVAG00000002007	LRPPRC	97	46.798	Pteropus_vampyrus
ENSKMAG00000003287	lrpprc	85	59.033	ENSPNYG00000000756	lrpprc	99	59.033	Pundamilia_nyererei
ENSKMAG00000003287	lrpprc	84	57.315	ENSPNAG00000002895	lrpprc	98	57.315	Pygocentrus_nattereri
ENSKMAG00000003287	lrpprc	81	48.478	ENSRNOG00000005877	Lrpprc	96	48.478	Rattus_norvegicus
ENSKMAG00000003287	lrpprc	82	47.322	ENSRBIG00000031552	LRPPRC	96	47.249	Rhinopithecus_bieti
ENSKMAG00000003287	lrpprc	82	48.748	ENSSBOG00000011807	LRPPRC	96	48.748	Saimiri_boliviensis_boliviensis
ENSKMAG00000003287	lrpprc	81	46.931	ENSSHAG00000018725	LRPPRC	98	46.931	Sarcophilus_harrisii
ENSKMAG00000003287	lrpprc	84	51.346	ENSSFOG00015001042	lrpprc	97	51.346	Scleropages_formosus
ENSKMAG00000003287	lrpprc	85	63.572	ENSSDUG00000019062	lrpprc	98	63.572	Seriola_dumerili
ENSKMAG00000003287	lrpprc	85	52.660	ENSSLDG00000023028	lrpprc	98	52.137	Seriola_lalandi_dorsalis
ENSKMAG00000003287	lrpprc	77	45.069	ENSSARG00000000426	LRPPRC	99	45.069	Sorex_araneus
ENSKMAG00000003287	lrpprc	85	59.522	ENSSPAG00000000162	lrpprc	99	59.564	Stegastes_partitus
ENSKMAG00000003287	lrpprc	84	48.244	ENSSSCG00000008452	LRPPRC	98	48.244	Sus_scrofa
ENSKMAG00000003287	lrpprc	80	45.940	ENSTGUG00000003759	LRPPRC	99	45.940	Taeniopygia_guttata
ENSKMAG00000003287	lrpprc	84	62.745	ENSTRUG00000008409	lrpprc	95	62.745	Takifugu_rubripes
ENSKMAG00000003287	lrpprc	85	60.814	ENSTNIG00000007470	lrpprc	100	61.993	Tetraodon_nigroviridis
ENSKMAG00000003287	lrpprc	82	47.226	ENSTTRG00000006403	LRPPRC	97	47.226	Tursiops_truncatus
ENSKMAG00000003287	lrpprc	81	46.028	ENSVPAG00000008993	LRPPRC	99	46.028	Vicugna_pacos
ENSKMAG00000003287	lrpprc	81	51.149	ENSXETG00000009296	lrpprc	97	51.149	Xenopus_tropicalis
ENSKMAG00000003287	lrpprc	84	60.014	ENSXCOG00000013343	lrpprc	90	70.133	Xiphophorus_couchianus
ENSKMAG00000003287	lrpprc	84	65.733	ENSXMAG00000018108	lrpprc	98	65.733	Xiphophorus_maculatus