EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003402 (Gene tree)
Gene ID: 108235819
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 135-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 10886 bases
Position: chrLWHD01000036.1:3856599-3867484
Accession: 108235819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	1	7
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	2	7
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	3	7
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	4	7
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	5	7
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	6	7
ENSKMAP00000004450	zf-C2H2	PF00096.26	2e-34	7	7
ENSKMAP00000004450	zf-met	PF12874.7	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004534	-	3255	XM_017416064	ENSKMAP00000004450	906 (aa)	XP_017271553	UPI0007F87BE0

Gene Model

Click here to download ENSKMAG00000003402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003402	-	66	37.226	ENSKMAG00000010133	znf526	64	37.226
ENSKMAG00000003402	-	58	36.364	ENSKMAG00000013290	-	91	36.364
ENSKMAG00000003402	-	54	36.078	ENSKMAG00000013745	-	65	36.078
ENSKMAG00000003402	-	53	36.047	ENSKMAG00000000597	-	94	36.782
ENSKMAG00000003402	-	52	35.694	ENSKMAG00000011031	-	63	38.290
ENSKMAG00000003402	-	52	41.584	ENSKMAG00000005375	-	57	41.584
ENSKMAG00000003402	-	54	46.914	ENSKMAG00000006633	-	66	46.914
ENSKMAG00000003402	-	74	34.571	ENSKMAG00000011850	-	97	34.435
ENSKMAG00000003402	-	50	46.552	ENSKMAG00000018656	si:dkey-77f5.14	99	46.552
ENSKMAG00000003402	-	52	42.152	ENSKMAG00000002032	-	55	42.152
ENSKMAG00000003402	-	52	31.566	ENSKMAG00000004080	zbtb17	64	31.382
ENSKMAG00000003402	-	52	40.969	ENSKMAG00000016333	-	93	47.059
ENSKMAG00000003402	-	54	34.568	ENSKMAG00000011982	znf646	63	34.568
ENSKMAG00000003402	-	61	39.648	ENSKMAG00000000543	-	96	39.648
ENSKMAG00000003402	-	53	33.746	ENSKMAG00000021874	-	84	34.202
ENSKMAG00000003402	-	52	36.338	ENSKMAG00000000668	-	90	36.338
ENSKMAG00000003402	-	52	53.211	ENSKMAG00000001996	-	92	53.211
ENSKMAG00000003402	-	54	42.105	ENSKMAG00000021716	-	66	42.105
ENSKMAG00000003402	-	52	45.055	ENSKMAG00000010903	-	60	45.055
ENSKMAG00000003402	-	52	38.132	ENSKMAG00000020025	-	96	38.132
ENSKMAG00000003402	-	56	37.688	ENSKMAG00000020046	-	75	36.594
ENSKMAG00000003402	-	52	48.193	ENSKMAG00000011111	-	100	39.407
ENSKMAG00000003402	-	68	33.784	ENSKMAG00000013166	zbtb16b	67	33.784
ENSKMAG00000003402	-	53	36.220	ENSKMAG00000000462	-	93	36.220
ENSKMAG00000003402	-	52	40.704	ENSKMAG00000000387	-	53	40.704
ENSKMAG00000003402	-	52	33.974	ENSKMAG00000009015	-	88	33.974
ENSKMAG00000003402	-	52	40.559	ENSKMAG00000004290	-	66	40.559
ENSKMAG00000003402	-	52	43.434	ENSKMAG00000003766	-	89	42.537
ENSKMAG00000003402	-	50	33.225	ENSKMAG00000007658	-	86	33.225
ENSKMAG00000003402	-	53	53.211	ENSKMAG00000007657	-	56	53.211
ENSKMAG00000003402	-	52	30.900	ENSKMAG00000000529	-	79	30.435
ENSKMAG00000003402	-	54	42.105	ENSKMAG00000003940	-	96	42.105
ENSKMAG00000003402	-	54	33.423	ENSKMAG00000004988	-	85	33.423
ENSKMAG00000003402	-	55	32.487	ENSKMAG00000007762	-	51	32.667
ENSKMAG00000003402	-	52	48.077	ENSKMAG00000000371	-	77	48.077
ENSKMAG00000003402	-	55	34.431	ENSKMAG00000001192	-	83	32.075
ENSKMAG00000003402	-	52	48.214	ENSKMAG00000000718	-	94	48.214
ENSKMAG00000003402	-	52	39.655	ENSKMAG00000017095	-	75	40.000
ENSKMAG00000003402	-	52	42.222	ENSKMAG00000015304	-	72	42.222
ENSKMAG00000003402	-	52	33.227	ENSKMAG00000013843	-	68	33.227
ENSKMAG00000003402	-	52	32.033	ENSKMAG00000013663	prdm5	73	32.033
ENSKMAG00000003402	-	52	44.286	ENSKMAG00000000795	-	99	44.286
ENSKMAG00000003402	-	52	50.467	ENSKMAG00000009979	-	61	50.467
ENSKMAG00000003402	-	52	34.844	ENSKMAG00000008262	-	76	36.538
ENSKMAG00000003402	-	52	51.852	ENSKMAG00000001091	-	52	51.852
ENSKMAG00000003402	-	53	31.915	ENSKMAG00000000073	-	89	34.295
ENSKMAG00000003402	-	52	35.329	ENSKMAG00000018648	-	73	35.329
ENSKMAG00000003402	-	52	37.569	ENSKMAG00000005747	-	90	36.455
ENSKMAG00000003402	-	52	46.667	ENSKMAG00000021194	-	68	46.667
ENSKMAG00000003402	-	53	40.625	ENSKMAG00000006773	-	87	32.246
ENSKMAG00000003402	-	53	34.767	ENSKMAG00000003186	-	82	34.767
ENSKMAG00000003402	-	52	36.726	ENSKMAG00000018636	-	76	36.726
ENSKMAG00000003402	-	59	40.000	ENSKMAG00000013239	-	70	39.815
ENSKMAG00000003402	-	53	37.004	ENSKMAG00000010330	zbtb47b	75	37.004
ENSKMAG00000003402	-	52	35.789	ENSKMAG00000012202	-	78	35.789
ENSKMAG00000003402	-	52	41.781	ENSKMAG00000009563	-	77	50.000
ENSKMAG00000003402	-	54	32.973	ENSKMAG00000001171	-	75	32.973
ENSKMAG00000003402	-	52	35.676	ENSKMAG00000013863	-	65	41.250
ENSKMAG00000003402	-	51	38.350	ENSKMAG00000014939	-	67	38.350
ENSKMAG00000003402	-	52	30.769	ENSKMAG00000001453	-	52	30.657
ENSKMAG00000003402	-	53	36.979	ENSKMAG00000019130	-	78	36.979
ENSKMAG00000003402	-	52	38.542	ENSKMAG00000006231	-	92	39.912
ENSKMAG00000003402	-	53	46.154	ENSKMAG00000002448	-	86	46.154
ENSKMAG00000003402	-	52	39.007	ENSKMAG00000002606	-	85	39.007
ENSKMAG00000003402	-	52	35.000	ENSKMAG00000021184	-	84	35.000
ENSKMAG00000003402	-	53	43.421	ENSKMAG00000021817	znf236	69	43.421
ENSKMAG00000003402	-	97	34.151	ENSKMAG00000012909	-	98	34.151
ENSKMAG00000003402	-	52	36.257	ENSKMAG00000000689	-	99	34.426
ENSKMAG00000003402	-	52	37.555	ENSKMAG00000000688	-	96	37.555
ENSKMAG00000003402	-	52	37.304	ENSKMAG00000010996	-	60	40.000
ENSKMAG00000003402	-	53	35.238	ENSKMAG00000002093	-	90	35.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003402	-	96	34.894	ENSAPOG00000003028	-	98	34.894	Acanthochromis_polyacanthus
ENSKMAG00000003402	-	97	34.681	ENSATEG00000023044	-	95	34.681	Anabas_testudineus
ENSKMAG00000003402	-	97	35.106	ENSACLG00000016841	-	97	35.106	Astatotilapia_calliptera
ENSKMAG00000003402	-	99	34.469	ENSCSEG00000004721	-	94	34.469	Cynoglossus_semilaevis
ENSKMAG00000003402	-	98	33.830	ENSFHEG00000003583	-	98	34.521	Fundulus_heteroclitus
ENSKMAG00000003402	-	97	35.425	ENSMAMG00000015670	-	97	35.425	Mastacembelus_armatus
ENSKMAG00000003402	-	97	35.106	ENSMZEG00005001313	-	97	35.106	Maylandia_zebra
ENSKMAG00000003402	-	51	74.943	ENSMMOG00000020682	-	87	74.943	Mola_mola
ENSKMAG00000003402	-	96	35.897	ENSMALG00000011860	-	98	35.897	Monopterus_albus
ENSKMAG00000003402	-	56	31.733	ENSNBRG00000010987	-	81	31.733	Neolamprologus_brichardi
ENSKMAG00000003402	-	53	33.936	ENSONIG00000017799	-	99	33.936	Oreochromis_niloticus
ENSKMAG00000003402	-	97	37.360	ENSORLG00000027418	-	98	33.333	Oryzias_latipes
ENSKMAG00000003402	-	98	33.609	ENSORLG00020008744	-	95	33.609	Oryzias_latipes_hni
ENSKMAG00000003402	-	97	33.265	ENSORLG00015007973	-	94	33.265	Oryzias_latipes_hsok
ENSKMAG00000003402	-	97	33.669	ENSOMEG00000003451	-	94	33.266	Oryzias_melastigma
ENSKMAG00000003402	-	97	34.086	ENSPREG00000007135	-	96	34.086	Poecilia_reticulata
ENSKMAG00000003402	-	100	79.431	ENSSMAG00000002031	-	100	79.431	Scophthalmus_maximus
ENSKMAG00000003402	-	97	35.532	ENSSMAG00000005081	-	99	35.532	Scophthalmus_maximus
ENSKMAG00000003402	-	98	35.532	ENSSDUG00000016734	-	94	35.532	Seriola_dumerili
ENSKMAG00000003402	-	98	35.532	ENSSLDG00000004485	-	94	35.532	Seriola_lalandi_dorsalis
ENSKMAG00000003402	-	99	32.558	ENSSPAG00000003796	-	96	32.710	Stegastes_partitus
ENSKMAG00000003402	-	99	34.255	ENSTRUG00000025881	-	94	34.255	Takifugu_rubripes
ENSKMAG00000003402	-	98	37.669	ENSXMAG00000024762	-	97	33.142	Xiphophorus_maculatus