EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000003414 (Gene tree)
Gene ID: 108233028
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8840 bases
Position: chrLWHD01000019.1:873491-882330
Accession: 108233028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004469	B3_4	PF03483.17	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004553	-	6670	XM_017411191	ENSKMAP00000004469	559 (aa)	XP_017266680	UPI0007F8C036

Gene Model

Click here to download ENSKMAG00000003414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003414	lrrc47	99	53.287	ENSG00000130764	LRRC47	99	53.460	Homo_sapiens
ENSKMAG00000003414	lrrc47	100	83.721	ENSAPOG00000019553	lrrc47	100	83.721	Acanthochromis_polyacanthus
ENSKMAG00000003414	lrrc47	76	56.393	ENSAMEG00000009152	LRRC47	94	57.078	Ailuropoda_melanoleuca
ENSKMAG00000003414	lrrc47	67	63.969	ENSAPLG00000003167	LRRC47	99	62.924	Anas_platyrhynchos
ENSKMAG00000003414	lrrc47	67	60.686	ENSACAG00000008267	LRRC47	100	60.686	Anolis_carolinensis
ENSKMAG00000003414	lrrc47	99	52.076	ENSANAG00000025576	LRRC47	99	52.249	Aotus_nancymaae
ENSKMAG00000003414	lrrc47	99	52.686	ENSBTAG00000004738	LRRC47	99	53.276	Bos_taurus
ENSKMAG00000003414	lrrc47	99	52.522	ENSCAFG00000019492	LRRC47	97	52.696	Canis_familiaris
ENSKMAG00000003414	lrrc47	99	52.705	ENSCAFG00020009667	LRRC47	99	52.880	Canis_lupus_dingo
ENSKMAG00000003414	lrrc47	99	53.806	ENSCHIG00000022607	LRRC47	98	54.340	Capra_hircus
ENSKMAG00000003414	lrrc47	96	54.137	ENSTSYG00000009326	LRRC47	97	54.130	Carlito_syrichta
ENSKMAG00000003414	lrrc47	66	59.416	ENSCAPG00000016517	LRRC47	99	59.416	Cavia_aperea
ENSKMAG00000003414	lrrc47	99	53.114	ENSCPOG00000014931	LRRC47	95	53.114	Cavia_porcellus
ENSKMAG00000003414	lrrc47	99	52.249	ENSCCAG00000024895	LRRC47	99	52.324	Cebus_capucinus
ENSKMAG00000003414	lrrc47	99	53.541	ENSCATG00000029337	LRRC47	99	54.059	Cercocebus_atys
ENSKMAG00000003414	lrrc47	99	52.613	ENSCLAG00000006093	LRRC47	99	52.613	Chinchilla_lanigera
ENSKMAG00000003414	lrrc47	99	53.713	ENSCSAG00000000727	LRRC47	99	54.231	Chlorocebus_sabaeus
ENSKMAG00000003414	lrrc47	99	52.013	ENSCPBG00000019404	LRRC47	98	52.013	Chrysemys_picta_bellii
ENSKMAG00000003414	lrrc47	79	56.522	ENSCANG00000030701	LRRC47	96	56.522	Colobus_angolensis_palliatus
ENSKMAG00000003414	lrrc47	99	53.833	ENSCGRG00001015159	Lrrc47	89	53.833	Cricetulus_griseus_chok1gshd
ENSKMAG00000003414	lrrc47	68	59.173	ENSCGRG00000017336	Lrrc47	99	60.000	Cricetulus_griseus_crigri
ENSKMAG00000003414	lrrc47	100	77.996	ENSCSEG00000006217	lrrc47	96	77.996	Cynoglossus_semilaevis
ENSKMAG00000003414	lrrc47	66	59.416	ENSDORG00000016594	Lrrc47	99	59.151	Dipodomys_ordii
ENSKMAG00000003414	lrrc47	99	53.806	ENSEASG00005021788	LRRC47	99	53.952	Equus_asinus_asinus
ENSKMAG00000003414	lrrc47	99	53.979	ENSECAG00000022472	LRRC47	90	54.124	Equus_caballus
ENSKMAG00000003414	lrrc47	100	69.718	ENSELUG00000017544	lrrc47	98	69.841	Esox_lucius
ENSKMAG00000003414	lrrc47	92	52.533	ENSFCAG00000011632	LRRC47	93	52.908	Felis_catus
ENSKMAG00000003414	lrrc47	70	62.183	ENSFALG00000009631	LRRC47	98	57.919	Ficedula_albicollis
ENSKMAG00000003414	lrrc47	100	66.310	ENSGMOG00000015674	lrrc47	99	66.785	Gadus_morhua
ENSKMAG00000003414	lrrc47	99	52.456	ENSGALG00000050995	LRRC47	99	52.632	Gallus_gallus
ENSKMAG00000003414	lrrc47	100	76.964	ENSGACG00000005550	lrrc47	99	76.786	Gasterosteus_aculeatus
ENSKMAG00000003414	lrrc47	99	52.292	ENSGAGG00000022584	LRRC47	98	53.141	Gopherus_agassizii
ENSKMAG00000003414	lrrc47	99	53.460	ENSGGOG00000015571	LRRC47	99	53.633	Gorilla_gorilla
ENSKMAG00000003414	lrrc47	99	52.166	ENSHGLG00000018278	LRRC47	95	52.513	Heterocephalus_glaber_female
ENSKMAG00000003414	lrrc47	70	58.065	ENSHGLG00100008507	LRRC47	99	58.065	Heterocephalus_glaber_male
ENSKMAG00000003414	lrrc47	100	75.313	ENSHCOG00000006348	lrrc47	98	76.029	Hippocampus_comes
ENSKMAG00000003414	lrrc47	99	54.310	ENSSTOG00000027559	LRRC47	99	54.310	Ictidomys_tridecemlineatus
ENSKMAG00000003414	lrrc47	99	54.152	ENSJJAG00000017474	Lrrc47	96	54.073	Jaculus_jaculus
ENSKMAG00000003414	lrrc47	99	53.899	ENSLAFG00000011657	LRRC47	99	54.498	Loxodonta_africana
ENSKMAG00000003414	lrrc47	99	40.901	ENSMFAG00000045730	LRRC47	88	56.540	Macaca_fascicularis
ENSKMAG00000003414	lrrc47	99	52.801	ENSMNEG00000042488	LRRC47	99	53.356	Macaca_nemestrina
ENSKMAG00000003414	lrrc47	77	55.457	ENSMLEG00000043735	LRRC47	90	56.347	Mandrillus_leucophaeus
ENSKMAG00000003414	lrrc47	99	54.530	ENSMAUG00000021337	Lrrc47	97	54.355	Mesocricetus_auratus
ENSKMAG00000003414	lrrc47	99	53.726	ENSMICG00000026816	LRRC47	99	54.202	Microcebus_murinus
ENSKMAG00000003414	lrrc47	99	54.482	ENSMOCG00000021279	Lrrc47	99	54.482	Microtus_ochrogaster
ENSKMAG00000003414	lrrc47	100	79.428	ENSMMOG00000017007	lrrc47	100	79.428	Mola_mola
ENSKMAG00000003414	lrrc47	99	42.954	ENSMODG00000006554	LRRC47	98	52.076	Monodelphis_domestica
ENSKMAG00000003414	lrrc47	99	54.167	MGP_CAROLIEiJ_G0026864	Lrrc47	99	54.217	Mus_caroli
ENSKMAG00000003414	lrrc47	99	54.167	ENSMUSG00000029028	Lrrc47	99	54.217	Mus_musculus
ENSKMAG00000003414	lrrc47	99	54.007	MGP_PahariEiJ_G0029212	Lrrc47	99	53.873	Mus_pahari
ENSKMAG00000003414	lrrc47	99	54.167	MGP_SPRETEiJ_G0027857	Lrrc47	99	54.217	Mus_spretus
ENSKMAG00000003414	lrrc47	66	57.672	ENSMPUG00000007321	LRRC47	75	57.937	Mustela_putorius_furo
ENSKMAG00000003414	lrrc47	99	53.158	ENSNGAG00000022153	Lrrc47	98	53.322	Nannospalax_galili
ENSKMAG00000003414	lrrc47	99	52.604	ENSNLEG00000008131	LRRC47	99	52.778	Nomascus_leucogenys
ENSKMAG00000003414	lrrc47	84	53.893	ENSODEG00000010882	LRRC47	93	53.878	Octodon_degus
ENSKMAG00000003414	lrrc47	97	80.000	ENSORLG00000002532	lrrc47	100	80.000	Oryzias_latipes
ENSKMAG00000003414	lrrc47	100	80.143	ENSORLG00020019601	lrrc47	100	80.143	Oryzias_latipes_hni
ENSKMAG00000003414	lrrc47	100	79.785	ENSORLG00015014040	lrrc47	100	79.785	Oryzias_latipes_hsok
ENSKMAG00000003414	lrrc47	100	80.501	ENSOMEG00000008989	lrrc47	100	80.501	Oryzias_melastigma
ENSKMAG00000003414	lrrc47	99	53.859	ENSOGAG00000001553	LRRC47	99	53.859	Otolemur_garnettii
ENSKMAG00000003414	lrrc47	99	51.993	ENSOARG00000015290	LRRC47	99	52.226	Ovis_aries
ENSKMAG00000003414	lrrc47	76	56.881	ENSPPAG00000036370	-	94	57.110	Pan_paniscus
ENSKMAG00000003414	lrrc47	99	52.166	ENSPPRG00000005261	LRRC47	98	52.513	Panthera_pardus
ENSKMAG00000003414	lrrc47	99	53.460	ENSPTRG00000000068	LRRC47	99	53.633	Pan_troglodytes
ENSKMAG00000003414	lrrc47	99	53.713	ENSPANG00000012437	LRRC47	99	54.231	Papio_anubis
ENSKMAG00000003414	lrrc47	66	63.395	ENSPSIG00000004196	LRRC47	99	63.395	Pelodiscus_sinensis
ENSKMAG00000003414	lrrc47	66	60.847	ENSPEMG00000021068	Lrrc47	99	60.847	Peromyscus_maniculatus_bairdii
ENSKMAG00000003414	lrrc47	99	54.625	ENSPCIG00000003638	LRRC47	98	54.435	Phascolarctos_cinereus
ENSKMAG00000003414	lrrc47	94	80.492	ENSPFOG00000000992	lrrc47	94	80.492	Poecilia_formosa
ENSKMAG00000003414	lrrc47	100	80.501	ENSPLAG00000008077	lrrc47	100	80.501	Poecilia_latipinna
ENSKMAG00000003414	lrrc47	100	81.395	ENSPMEG00000007367	lrrc47	100	80.143	Poecilia_mexicana
ENSKMAG00000003414	lrrc47	99	53.287	ENSPPYG00000001960	LRRC47	99	53.460	Pongo_abelii
ENSKMAG00000003414	lrrc47	99	54.246	ENSPCOG00000019161	LRRC47	99	54.655	Propithecus_coquereli
ENSKMAG00000003414	lrrc47	98	54.336	ENSPVAG00000009839	LRRC47	97	54.610	Pteropus_vampyrus
ENSKMAG00000003414	lrrc47	99	66.129	ENSPNAG00000017982	lrrc47	98	67.204	Pygocentrus_nattereri
ENSKMAG00000003414	lrrc47	99	53.806	ENSRNOG00000024796	Lrrc47	99	53.979	Rattus_norvegicus
ENSKMAG00000003414	lrrc47	99	53.713	ENSRBIG00000019437	LRRC47	99	54.231	Rhinopithecus_bieti
ENSKMAG00000003414	lrrc47	99	53.713	ENSRROG00000043182	LRRC47	99	54.231	Rhinopithecus_roxellana
ENSKMAG00000003414	lrrc47	79	55.629	ENSSBOG00000026334	LRRC47	92	55.850	Saimiri_boliviensis_boliviensis
ENSKMAG00000003414	lrrc47	99	47.578	ENSSHAG00000007360	LRRC47	98	47.849	Sarcophilus_harrisii
ENSKMAG00000003414	lrrc47	100	81.250	ENSSMAG00000009344	lrrc47	100	81.250	Scophthalmus_maximus
ENSKMAG00000003414	lrrc47	100	83.721	ENSSDUG00000014618	lrrc47	100	83.721	Seriola_dumerili
ENSKMAG00000003414	lrrc47	100	84.079	ENSSLDG00000018908	lrrc47	100	84.079	Seriola_lalandi_dorsalis
ENSKMAG00000003414	lrrc47	99	52.840	ENSSPUG00000010277	LRRC47	98	53.093	Sphenodon_punctatus
ENSKMAG00000003414	lrrc47	100	84.436	ENSSPAG00000005188	lrrc47	100	84.436	Stegastes_partitus
ENSKMAG00000003414	lrrc47	99	53.125	ENSSSCG00000039516	LRRC47	99	53.184	Sus_scrofa
ENSKMAG00000003414	lrrc47	72	60.794	ENSTGUG00000002737	LRRC47	99	60.794	Taeniopygia_guttata
ENSKMAG00000003414	lrrc47	100	76.029	ENSTRUG00000017696	lrrc47	100	76.386	Takifugu_rubripes
ENSKMAG00000003414	lrrc47	100	75.313	ENSTNIG00000010923	lrrc47	99	74.597	Tetraodon_nigroviridis
ENSKMAG00000003414	lrrc47	99	52.249	ENSTTRG00000011751	LRRC47	99	52.055	Tursiops_truncatus
ENSKMAG00000003414	lrrc47	89	53.565	ENSUAMG00000012080	LRRC47	98	54.111	Ursus_americanus
ENSKMAG00000003414	lrrc47	67	58.005	ENSUMAG00000010781	LRRC47	81	58.701	Ursus_maritimus
ENSKMAG00000003414	lrrc47	95	50.542	ENSVVUG00000027118	LRRC47	93	50.722	Vulpes_vulpes
ENSKMAG00000003414	lrrc47	99	57.041	ENSXETG00000006029	lrrc47	98	57.576	Xenopus_tropicalis
ENSKMAG00000003414	lrrc47	99	81.013	ENSXCOG00000002813	lrrc47	98	79.566	Xiphophorus_couchianus
ENSKMAG00000003414	lrrc47	99	79.496	ENSXMAG00000019386	lrrc47	100	79.496	Xiphophorus_maculatus