EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000003473 (Gene tree)
Gene ID: 108243165
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 45096 bases
Position: chrLWHD01000004.1:8519381-8564476
Accession: 108243165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004622	S1	PF00575.23	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004707	-	3692	XM_017428445	ENSKMAP00000004622	1005 (aa)	XP_017283934	UPI0007F8AC76

Gene Model

Click here to download ENSKMAG00000003473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003473	si:ch211-117n7.8	84	56.593	ENSG00000068784	SRBD1	98	51.796	Homo_sapiens
ENSKMAG00000003473	si:ch211-117n7.8	100	81.890	ENSAPOG00000005103	si:ch211-117n7.8	99	81.890	Acanthochromis_polyacanthus
ENSKMAG00000003473	si:ch211-117n7.8	83	57.025	ENSAMEG00000005993	SRBD1	99	51.270	Ailuropoda_melanoleuca
ENSKMAG00000003473	si:ch211-117n7.8	97	80.972	ENSACIG00000009875	si:ch211-117n7.8	100	81.616	Amphilophus_citrinellus
ENSKMAG00000003473	si:ch211-117n7.8	100	80.493	ENSAOCG00000024718	si:ch211-117n7.8	99	80.493	Amphiprion_ocellaris
ENSKMAG00000003473	si:ch211-117n7.8	97	80.754	ENSAPEG00000002645	si:ch211-117n7.8	100	80.754	Amphiprion_percula
ENSKMAG00000003473	si:ch211-117n7.8	100	79.051	ENSATEG00000010844	si:ch211-117n7.8	99	79.249	Anabas_testudineus
ENSKMAG00000003473	si:ch211-117n7.8	95	54.145	ENSAPLG00000006313	SRBD1	97	53.715	Anas_platyrhynchos
ENSKMAG00000003473	si:ch211-117n7.8	97	51.570	ENSANAG00000025573	SRBD1	98	51.400	Aotus_nancymaae
ENSKMAG00000003473	si:ch211-117n7.8	100	80.642	ENSACLG00000024219	si:ch211-117n7.8	99	81.623	Astatotilapia_calliptera
ENSKMAG00000003473	si:ch211-117n7.8	99	62.874	ENSAMXG00000004294	SRBD1	99	64.532	Astyanax_mexicanus
ENSKMAG00000003473	si:ch211-117n7.8	99	51.354	ENSBTAG00000007508	SRBD1	99	49.902	Bos_taurus
ENSKMAG00000003473	si:ch211-117n7.8	94	51.955	ENSCJAG00000000727	SRBD1	99	50.982	Callithrix_jacchus
ENSKMAG00000003473	si:ch211-117n7.8	97	52.096	ENSCAFG00000002554	SRBD1	99	51.500	Canis_familiaris
ENSKMAG00000003473	si:ch211-117n7.8	97	49.550	ENSCAFG00020026284	SRBD1	100	56.301	Canis_lupus_dingo
ENSKMAG00000003473	si:ch211-117n7.8	99	51.359	ENSCHIG00000016535	SRBD1	98	51.597	Capra_hircus
ENSKMAG00000003473	si:ch211-117n7.8	94	52.405	ENSTSYG00000012797	SRBD1	98	51.772	Carlito_syrichta
ENSKMAG00000003473	si:ch211-117n7.8	84	56.856	ENSCPOG00000004773	SRBD1	85	56.856	Cavia_porcellus
ENSKMAG00000003473	si:ch211-117n7.8	94	52.058	ENSCCAG00000025589	SRBD1	98	50.693	Cebus_capucinus
ENSKMAG00000003473	si:ch211-117n7.8	97	52.275	ENSCATG00000039530	SRBD1	98	51.996	Cercocebus_atys
ENSKMAG00000003473	si:ch211-117n7.8	97	52.477	ENSCLAG00000008623	SRBD1	99	52.477	Chinchilla_lanigera
ENSKMAG00000003473	si:ch211-117n7.8	97	52.077	ENSCSAG00000013350	SRBD1	98	51.900	Chlorocebus_sabaeus
ENSKMAG00000003473	si:ch211-117n7.8	70	76.744	ENSCHOG00000003805	SRBD1	69	76.744	Choloepus_hoffmanni
ENSKMAG00000003473	si:ch211-117n7.8	83	57.615	ENSCPBG00000005677	SRBD1	98	53.247	Chrysemys_picta_bellii
ENSKMAG00000003473	si:ch211-117n7.8	78	40.699	ENSCING00000005950	-	99	40.699	Ciona_intestinalis
ENSKMAG00000003473	si:ch211-117n7.8	78	41.992	ENSCSAVG00000000861	-	99	41.992	Ciona_savignyi
ENSKMAG00000003473	si:ch211-117n7.8	97	51.777	ENSCANG00000016307	SRBD1	100	50.932	Colobus_angolensis_palliatus
ENSKMAG00000003473	si:ch211-117n7.8	83	57.295	ENSCGRG00001000513	Srbd1	84	57.295	Cricetulus_griseus_chok1gshd
ENSKMAG00000003473	si:ch211-117n7.8	83	57.295	ENSCGRG00000002283	Srbd1	84	57.295	Cricetulus_griseus_crigri
ENSKMAG00000003473	si:ch211-117n7.8	100	73.419	ENSCSEG00000000856	si:ch211-117n7.8	99	73.715	Cynoglossus_semilaevis
ENSKMAG00000003473	si:ch211-117n7.8	98	79.430	ENSCVAG00000020212	si:ch211-117n7.8	99	79.430	Cyprinodon_variegatus
ENSKMAG00000003473	si:ch211-117n7.8	83	56.338	ENSDNOG00000018686	SRBD1	83	56.338	Dasypus_novemcinctus
ENSKMAG00000003473	si:ch211-117n7.8	99	51.429	ENSDORG00000010468	Srbd1	100	50.433	Dipodomys_ordii
ENSKMAG00000003473	si:ch211-117n7.8	78	36.101	FBgn0051156	CG31156	79	36.101	Drosophila_melanogaster
ENSKMAG00000003473	si:ch211-117n7.8	73	57.482	ENSETEG00000000739	SRBD1	77	57.741	Echinops_telfairi
ENSKMAG00000003473	si:ch211-117n7.8	72	47.383	ENSEBUG00000008902	si:ch211-117n7.8	95	47.383	Eptatretus_burgeri
ENSKMAG00000003473	si:ch211-117n7.8	94	50.928	ENSEASG00005003132	SRBD1	98	55.263	Equus_asinus_asinus
ENSKMAG00000003473	si:ch211-117n7.8	94	52.577	ENSECAG00000013865	SRBD1	96	51.232	Equus_caballus
ENSKMAG00000003473	si:ch211-117n7.8	99	66.124	ENSELUG00000012592	si:ch211-117n7.8	99	66.124	Esox_lucius
ENSKMAG00000003473	si:ch211-117n7.8	83	57.412	ENSFCAG00000005101	SRBD1	99	51.541	Felis_catus
ENSKMAG00000003473	si:ch211-117n7.8	87	56.229	ENSFALG00000012966	SRBD1	97	53.259	Ficedula_albicollis
ENSKMAG00000003473	si:ch211-117n7.8	98	52.319	ENSFDAG00000016670	SRBD1	99	52.319	Fukomys_damarensis
ENSKMAG00000003473	si:ch211-117n7.8	100	82.434	ENSFHEG00000019480	si:ch211-117n7.8	99	82.434	Fundulus_heteroclitus
ENSKMAG00000003473	si:ch211-117n7.8	50	71.127	ENSGMOG00000018010	-	100	71.127	Gadus_morhua
ENSKMAG00000003473	si:ch211-117n7.8	83	58.519	ENSGALG00000009990	SRBD1	98	53.300	Gallus_gallus
ENSKMAG00000003473	si:ch211-117n7.8	100	81.629	ENSGAFG00000019664	si:ch211-117n7.8	99	81.728	Gambusia_affinis
ENSKMAG00000003473	si:ch211-117n7.8	62	83.022	ENSGACG00000010794	si:ch211-117n7.8	100	83.022	Gasterosteus_aculeatus
ENSKMAG00000003473	si:ch211-117n7.8	83	58.491	ENSGAGG00000006166	SRBD1	99	58.491	Gopherus_agassizii
ENSKMAG00000003473	si:ch211-117n7.8	84	56.826	ENSGGOG00000005910	SRBD1	87	56.826	Gorilla_gorilla
ENSKMAG00000003473	si:ch211-117n7.8	97	68.902	ENSHBUG00000013207	si:ch211-117n7.8	100	69.145	Haplochromis_burtoni
ENSKMAG00000003473	si:ch211-117n7.8	97	52.218	ENSHGLG00000018153	-	97	52.218	Heterocephalus_glaber_female
ENSKMAG00000003473	si:ch211-117n7.8	97	52.218	ENSHGLG00100015183	-	97	52.218	Heterocephalus_glaber_male
ENSKMAG00000003473	si:ch211-117n7.8	94	64.942	ENSIPUG00000009661	srbd1	99	63.591	Ictalurus_punctatus
ENSKMAG00000003473	si:ch211-117n7.8	97	52.786	ENSSTOG00000005898	SRBD1	97	52.786	Ictidomys_tridecemlineatus
ENSKMAG00000003473	si:ch211-117n7.8	97	50.504	ENSJJAG00000022244	Srbd1	97	50.504	Jaculus_jaculus
ENSKMAG00000003473	si:ch211-117n7.8	100	78.963	ENSLBEG00000027518	si:ch211-117n7.8	99	78.963	Labrus_bergylta
ENSKMAG00000003473	si:ch211-117n7.8	84	58.528	ENSLACG00000009790	SRBD1	99	58.528	Latimeria_chalumnae
ENSKMAG00000003473	si:ch211-117n7.8	93	64.308	ENSLOCG00000016360	si:ch211-117n7.8	99	61.970	Lepisosteus_oculatus
ENSKMAG00000003473	si:ch211-117n7.8	94	52.746	ENSMFAG00000042026	SRBD1	98	51.900	Macaca_fascicularis
ENSKMAG00000003473	si:ch211-117n7.8	97	52.077	ENSMMUG00000003490	SRBD1	98	51.900	Macaca_mulatta
ENSKMAG00000003473	si:ch211-117n7.8	94	51.136	ENSMNEG00000034701	SRBD1	98	50.449	Macaca_nemestrina
ENSKMAG00000003473	si:ch211-117n7.8	97	52.178	ENSMLEG00000000745	SRBD1	98	52.000	Mandrillus_leucophaeus
ENSKMAG00000003473	si:ch211-117n7.8	100	78.755	ENSMAMG00000021921	si:ch211-117n7.8	99	79.545	Mastacembelus_armatus
ENSKMAG00000003473	si:ch211-117n7.8	100	81.623	ENSMZEG00005027369	si:ch211-117n7.8	99	81.720	Maylandia_zebra
ENSKMAG00000003473	si:ch211-117n7.8	79	56.420	ENSMGAG00000010273	SRBD1	99	56.420	Meleagris_gallopavo
ENSKMAG00000003473	si:ch211-117n7.8	77	56.188	ENSMAUG00000013916	Srbd1	95	56.188	Mesocricetus_auratus
ENSKMAG00000003473	si:ch211-117n7.8	90	54.171	ENSMICG00000007835	SRBD1	99	51.009	Microcebus_murinus
ENSKMAG00000003473	si:ch211-117n7.8	98	50.450	ENSMOCG00000018716	Srbd1	99	50.450	Microtus_ochrogaster
ENSKMAG00000003473	si:ch211-117n7.8	97	77.426	ENSMMOG00000007507	si:ch211-117n7.8	100	77.426	Mola_mola
ENSKMAG00000003473	si:ch211-117n7.8	100	78.495	ENSMALG00000001562	si:ch211-117n7.8	99	79.081	Monopterus_albus
ENSKMAG00000003473	si:ch211-117n7.8	94	52.201	MGP_CAROLIEiJ_G0021934	Srbd1	99	56.908	Mus_caroli
ENSKMAG00000003473	si:ch211-117n7.8	99	50.595	ENSMUSG00000024135	Srbd1	99	55.000	Mus_musculus
ENSKMAG00000003473	si:ch211-117n7.8	84	56.706	MGP_PahariEiJ_G0020924	Srbd1	85	56.706	Mus_pahari
ENSKMAG00000003473	si:ch211-117n7.8	99	50.546	MGP_SPRETEiJ_G0022850	Srbd1	99	50.546	Mus_spretus
ENSKMAG00000003473	si:ch211-117n7.8	97	52.052	ENSMLUG00000007039	SRBD1	98	51.877	Myotis_lucifugus
ENSKMAG00000003473	si:ch211-117n7.8	97	50.145	ENSNGAG00000011893	Srbd1	98	50.145	Nannospalax_galili
ENSKMAG00000003473	si:ch211-117n7.8	98	79.053	ENSNBRG00000012873	si:ch211-117n7.8	100	79.394	Neolamprologus_brichardi
ENSKMAG00000003473	si:ch211-117n7.8	84	56.359	ENSNLEG00000016877	SRBD1	84	56.359	Nomascus_leucogenys
ENSKMAG00000003473	si:ch211-117n7.8	84	56.501	ENSODEG00000012095	SRBD1	86	56.501	Octodon_degus
ENSKMAG00000003473	si:ch211-117n7.8	100	81.916	ENSONIG00000000945	si:ch211-117n7.8	100	86.353	Oreochromis_niloticus
ENSKMAG00000003473	si:ch211-117n7.8	93	53.002	ENSOCUG00000015385	SRBD1	99	51.367	Oryctolagus_cuniculus
ENSKMAG00000003473	si:ch211-117n7.8	100	73.137	ENSORLG00000004427	si:ch211-117n7.8	99	73.137	Oryzias_latipes
ENSKMAG00000003473	si:ch211-117n7.8	100	76.494	ENSORLG00020012792	si:ch211-117n7.8	99	76.494	Oryzias_latipes_hni
ENSKMAG00000003473	si:ch211-117n7.8	100	75.980	ENSORLG00015018598	si:ch211-117n7.8	99	75.980	Oryzias_latipes_hsok
ENSKMAG00000003473	si:ch211-117n7.8	99	74.803	ENSOMEG00000012229	si:ch211-117n7.8	99	78.788	Oryzias_melastigma
ENSKMAG00000003473	si:ch211-117n7.8	83	54.770	ENSOGAG00000001076	SRBD1	84	54.770	Otolemur_garnettii
ENSKMAG00000003473	si:ch211-117n7.8	99	47.981	ENSOARG00000005958	SRBD1	99	48.221	Ovis_aries
ENSKMAG00000003473	si:ch211-117n7.8	83	56.604	ENSPPAG00000038442	SRBD1	98	51.397	Pan_paniscus
ENSKMAG00000003473	si:ch211-117n7.8	93	53.026	ENSPPRG00000003449	SRBD1	99	51.707	Panthera_pardus
ENSKMAG00000003473	si:ch211-117n7.8	93	53.026	ENSPTIG00000012495	SRBD1	99	51.252	Panthera_tigris_altaica
ENSKMAG00000003473	si:ch211-117n7.8	83	56.840	ENSPTRG00000011889	SRBD1	98	51.597	Pan_troglodytes
ENSKMAG00000003473	si:ch211-117n7.8	97	52.280	ENSPANG00000008063	SRBD1	98	52.000	Papio_anubis
ENSKMAG00000003473	si:ch211-117n7.8	94	64.331	ENSPKIG00000021973	si:ch211-117n7.8	99	62.130	Paramormyrops_kingsleyae
ENSKMAG00000003473	si:ch211-117n7.8	83	57.665	ENSPSIG00000008992	SRBD1	99	51.613	Pelodiscus_sinensis
ENSKMAG00000003473	si:ch211-117n7.8	98	72.783	ENSPMGG00000013348	si:ch211-117n7.8	99	74.040	Periophthalmus_magnuspinnatus
ENSKMAG00000003473	si:ch211-117n7.8	99	49.373	ENSPEMG00000020684	Srbd1	99	49.373	Peromyscus_maniculatus_bairdii
ENSKMAG00000003473	si:ch211-117n7.8	100	82.242	ENSPFOG00000010650	si:ch211-117n7.8	99	82.242	Poecilia_formosa
ENSKMAG00000003473	si:ch211-117n7.8	100	82.540	ENSPLAG00000002141	si:ch211-117n7.8	99	82.540	Poecilia_latipinna
ENSKMAG00000003473	si:ch211-117n7.8	100	82.242	ENSPMEG00000018537	si:ch211-117n7.8	99	82.242	Poecilia_mexicana
ENSKMAG00000003473	si:ch211-117n7.8	100	79.109	ENSPREG00000003258	si:ch211-117n7.8	99	79.109	Poecilia_reticulata
ENSKMAG00000003473	si:ch211-117n7.8	86	51.695	ENSPPYG00000012444	SRBD1	97	48.496	Pongo_abelii
ENSKMAG00000003473	si:ch211-117n7.8	75	51.974	ENSPCAG00000005629	SRBD1	80	51.974	Procavia_capensis
ENSKMAG00000003473	si:ch211-117n7.8	80	59.429	ENSPCOG00000017669	SRBD1	95	59.429	Propithecus_coquereli
ENSKMAG00000003473	si:ch211-117n7.8	83	50.118	ENSPVAG00000001782	SRBD1	99	45.882	Pteropus_vampyrus
ENSKMAG00000003473	si:ch211-117n7.8	97	76.085	ENSPNYG00000000508	si:ch211-117n7.8	100	76.555	Pundamilia_nyererei
ENSKMAG00000003473	si:ch211-117n7.8	95	67.503	ENSPNAG00000013492	SRBD1	97	66.565	Pygocentrus_nattereri
ENSKMAG00000003473	si:ch211-117n7.8	94	51.209	ENSRNOG00000014720	Srbd1	97	50.957	Rattus_norvegicus
ENSKMAG00000003473	si:ch211-117n7.8	97	51.923	ENSRBIG00000033486	SRBD1	100	51.076	Rhinopithecus_bieti
ENSKMAG00000003473	si:ch211-117n7.8	97	51.923	ENSRROG00000041599	SRBD1	100	51.076	Rhinopithecus_roxellana
ENSKMAG00000003473	si:ch211-117n7.8	83	56.368	ENSSBOG00000024982	SRBD1	99	50.539	Saimiri_boliviensis_boliviensis
ENSKMAG00000003473	si:ch211-117n7.8	86	65.708	ENSSFOG00015001128	si:ch211-117n7.8	94	65.708	Scleropages_formosus
ENSKMAG00000003473	si:ch211-117n7.8	100	79.317	ENSSMAG00000018256	si:ch211-117n7.8	99	79.317	Scophthalmus_maximus
ENSKMAG00000003473	si:ch211-117n7.8	93	82.139	ENSSLDG00000023189	si:ch211-117n7.8	100	81.405	Seriola_lalandi_dorsalis
ENSKMAG00000003473	si:ch211-117n7.8	93	50.105	ENSSARG00000009740	SRBD1	99	48.090	Sorex_araneus
ENSKMAG00000003473	si:ch211-117n7.8	83	59.264	ENSSPUG00000010475	SRBD1	99	54.735	Sphenodon_punctatus
ENSKMAG00000003473	si:ch211-117n7.8	93	80.815	ENSSPAG00000008092	-	99	78.600	Stegastes_partitus
ENSKMAG00000003473	si:ch211-117n7.8	99	50.584	ENSSSCG00000008445	SRBD1	98	50.875	Sus_scrofa
ENSKMAG00000003473	si:ch211-117n7.8	83	57.427	ENSTGUG00000003878	SRBD1	100	57.427	Taeniopygia_guttata
ENSKMAG00000003473	si:ch211-117n7.8	100	74.805	ENSTRUG00000007080	si:ch211-117n7.8	99	80.179	Takifugu_rubripes
ENSKMAG00000003473	si:ch211-117n7.8	98	74.038	ENSTNIG00000007464	si:ch211-117n7.8	98	74.038	Tetraodon_nigroviridis
ENSKMAG00000003473	si:ch211-117n7.8	54	80.851	ENSTBEG00000004556	SRBD1	54	80.851	Tupaia_belangeri
ENSKMAG00000003473	si:ch211-117n7.8	79	57.143	ENSTTRG00000011871	SRBD1	91	57.143	Tursiops_truncatus
ENSKMAG00000003473	si:ch211-117n7.8	83	57.126	ENSUAMG00000008126	SRBD1	97	53.261	Ursus_americanus
ENSKMAG00000003473	si:ch211-117n7.8	83	57.126	ENSUMAG00000012902	SRBD1	98	51.024	Ursus_maritimus
ENSKMAG00000003473	si:ch211-117n7.8	84	55.723	ENSVPAG00000006825	SRBD1	92	55.723	Vicugna_pacos
ENSKMAG00000003473	si:ch211-117n7.8	99	51.068	ENSVVUG00000005389	SRBD1	99	51.359	Vulpes_vulpes
ENSKMAG00000003473	si:ch211-117n7.8	98	45.881	ENSXETG00000002760	srbd1	98	46.169	Xenopus_tropicalis
ENSKMAG00000003473	si:ch211-117n7.8	100	82.143	ENSXMAG00000016861	si:ch211-117n7.8	99	82.143	Xiphophorus_maculatus