EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003494 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3812 bases
Position: chrLWHD01000409.1:112194-116005
Accession: 108249134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004594	MMR_HSR1	PF01926.23	7.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004679	-	621	XM_017438313	ENSKMAP00000004594	206 (aa)	XP_017293802	-

Gene Model

Click here to download ENSKMAG00000003494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003494	si:dkey-16l2.16	72	33.758	ENSKMAG00000019397	rhebl1	83	33.758
ENSKMAG00000003494	si:dkey-16l2.16	72	32.895	ENSKMAG00000012723	rabl2	74	30.952
ENSKMAG00000003494	si:dkey-16l2.16	81	45.000	ENSKMAG00000002862	zgc:101559	77	45.000
ENSKMAG00000003494	si:dkey-16l2.16	68	45.033	ENSKMAG00000020034	-	51	45.033
ENSKMAG00000003494	si:dkey-16l2.16	96	34.826	ENSKMAG00000020038	rab5c	76	38.690
ENSKMAG00000003494	si:dkey-16l2.16	95	32.057	ENSKMAG00000019647	rab34a	64	35.503
ENSKMAG00000003494	si:dkey-16l2.16	96	37.681	ENSKMAG00000003646	-	84	40.476
ENSKMAG00000003494	si:dkey-16l2.16	74	34.375	ENSKMAG00000003938	kras	88	32.143
ENSKMAG00000003494	si:dkey-16l2.16	75	60.248	ENSKMAG00000014038	-	75	60.248
ENSKMAG00000003494	si:dkey-16l2.16	76	32.919	ENSKMAG00000018270	rab23	74	32.571
ENSKMAG00000003494	si:dkey-16l2.16	77	41.718	ENSKMAG00000017487	rab14	76	41.718
ENSKMAG00000003494	si:dkey-16l2.16	77	36.970	ENSKMAG00000015507	rab6ba	74	38.312
ENSKMAG00000003494	si:dkey-16l2.16	78	33.133	ENSKMAG00000001922	Ha-ras	87	33.133
ENSKMAG00000003494	si:dkey-16l2.16	79	33.929	ENSKMAG00000020733	rras	88	33.333
ENSKMAG00000003494	si:dkey-16l2.16	98	39.713	ENSKMAG00000006082	-	80	43.678
ENSKMAG00000003494	si:dkey-16l2.16	78	38.596	ENSKMAG00000020013	-	82	38.596
ENSKMAG00000003494	si:dkey-16l2.16	82	32.571	ENSKMAG00000003080	si:cabz01085950.1	83	32.530
ENSKMAG00000003494	si:dkey-16l2.16	80	38.953	ENSKMAG00000019964	rab9b	85	38.953
ENSKMAG00000003494	si:dkey-16l2.16	58	30.882	ENSKMAG00000016837	arfrp1	66	30.882
ENSKMAG00000003494	si:dkey-16l2.16	99	37.681	ENSKMAG00000004945	rab25a	76	44.375
ENSKMAG00000003494	si:dkey-16l2.16	55	30.833	ENSKMAG00000021494	-	63	30.833
ENSKMAG00000003494	si:dkey-16l2.16	93	34.804	ENSKMAG00000017150	-	78	35.795
ENSKMAG00000003494	si:dkey-16l2.16	84	34.759	ENSKMAG00000011278	rab6bb	88	35.227
ENSKMAG00000003494	si:dkey-16l2.16	98	40.670	ENSKMAG00000006170	-	80	43.678
ENSKMAG00000003494	si:dkey-16l2.16	98	39.713	ENSKMAG00000009033	rab11bb	80	43.678
ENSKMAG00000003494	si:dkey-16l2.16	55	30.833	ENSKMAG00000019525	arf3b	63	30.833
ENSKMAG00000003494	si:dkey-16l2.16	78	39.181	ENSKMAG00000006812	RAB7A	81	39.181
ENSKMAG00000003494	si:dkey-16l2.16	99	50.239	ENSKMAG00000006810	rab1ba	80	59.877
ENSKMAG00000003494	si:dkey-16l2.16	85	37.778	ENSKMAG00000020250	rab4a	79	40.000
ENSKMAG00000003494	si:dkey-16l2.16	84	45.506	ENSKMAG00000004439	rab30	88	45.506
ENSKMAG00000003494	si:dkey-16l2.16	91	42.347	ENSKMAG00000006593	rab33a	80	45.349
ENSKMAG00000003494	si:dkey-16l2.16	72	38.562	ENSKMAG00000013146	-	80	38.562
ENSKMAG00000003494	si:dkey-16l2.16	77	45.062	ENSKMAG00000015488	rab25b	76	46.203
ENSKMAG00000003494	si:dkey-16l2.16	80	46.471	ENSKMAG00000007364	rab18b	82	46.471
ENSKMAG00000003494	si:dkey-16l2.16	86	47.253	ENSKMAG00000001908	rab13	91	49.419
ENSKMAG00000003494	si:dkey-16l2.16	96	37.438	ENSKMAG00000008625	RAB39B	77	43.293
ENSKMAG00000003494	si:dkey-16l2.16	79	44.311	ENSKMAG00000012657	-	75	44.311
ENSKMAG00000003494	si:dkey-16l2.16	79	31.953	ENSKMAG00000017893	mras	79	31.953
ENSKMAG00000003494	si:dkey-16l2.16	89	42.021	ENSKMAG00000018973	-	73	46.914
ENSKMAG00000003494	si:dkey-16l2.16	96	35.323	ENSKMAG00000017417	-	76	39.286
ENSKMAG00000003494	si:dkey-16l2.16	99	40.385	ENSKMAG00000001191	RAB15	84	45.763
ENSKMAG00000003494	si:dkey-16l2.16	89	39.000	ENSKMAG00000003105	rab33ba	76	41.667
ENSKMAG00000003494	si:dkey-16l2.16	78	33.133	ENSKMAG00000020448	rheb	88	33.133
ENSKMAG00000003494	si:dkey-16l2.16	82	42.286	ENSKMAG00000007267	rab42a	80	42.286
ENSKMAG00000003494	si:dkey-16l2.16	74	34.161	ENSKMAG00000011954	dnajc27	59	34.161
ENSKMAG00000003494	si:dkey-16l2.16	98	41.827	ENSKMAG00000011905	rab11a	91	43.077
ENSKMAG00000003494	si:dkey-16l2.16	76	60.736	ENSKMAG00000017357	rab1ab	79	61.111
ENSKMAG00000003494	si:dkey-16l2.16	73	38.365	ENSKMAG00000021039	si:dkey-13a21.4	66	38.365
ENSKMAG00000003494	si:dkey-16l2.16	73	42.857	ENSKMAG00000014705	rab22a	83	40.994
ENSKMAG00000003494	si:dkey-16l2.16	78	40.606	ENSKMAG00000020056	rab12	70	40.120
ENSKMAG00000003494	si:dkey-16l2.16	98	38.942	ENSKMAG00000015516	rab11al	81	41.954
ENSKMAG00000003494	si:dkey-16l2.16	77	38.323	ENSKMAG00000017662	rab9a	82	38.323
ENSKMAG00000003494	si:dkey-16l2.16	98	32.701	ENSKMAG00000019341	rab34b	68	33.721
ENSKMAG00000003494	si:dkey-16l2.16	99	50.000	ENSKMAG00000009856	zgc:171927	78	57.831
ENSKMAG00000003494	si:dkey-16l2.16	75	45.912	ENSKMAG00000009799	rab2a	75	45.912
ENSKMAG00000003494	si:dkey-16l2.16	80	40.698	ENSKMAG00000012778	si:dkey-34d22.5	77	40.116
ENSKMAG00000003494	si:dkey-16l2.16	86	35.135	ENSKMAG00000002545	-	73	38.961
ENSKMAG00000003494	si:dkey-16l2.16	92	44.845	ENSKMAG00000020392	rab15	83	46.893
ENSKMAG00000003494	si:dkey-16l2.16	99	67.633	ENSKMAG00000006854	rab35b	86	75.723
ENSKMAG00000003494	si:dkey-16l2.16	56	30.579	ENSKMAG00000020210	arl4aa	63	30.579
ENSKMAG00000003494	si:dkey-16l2.16	80	39.881	ENSKMAG00000005111	rab5aa	78	39.881
ENSKMAG00000003494	si:dkey-16l2.16	77	42.945	ENSKMAG00000011301	-	76	42.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003494	si:dkey-16l2.16	100	91.388	ENSAPOG00000008263	si:dkey-16l2.16	100	91.388	Acanthochromis_polyacanthus
ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	ENSAOCG00000016825	si:dkey-16l2.16	100	92.823	Amphiprion_ocellaris
ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	ENSAPEG00000006500	si:dkey-16l2.16	100	92.823	Amphiprion_percula
ENSKMAG00000003494	si:dkey-16l2.16	100	92.344	ENSATEG00000019238	si:dkey-16l2.16	100	92.344	Anabas_testudineus
ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	ENSACLG00000018721	si:dkey-16l2.16	100	90.431	Astatotilapia_calliptera
ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	ENSAMXG00000038243	si:dkey-16l2.16	100	90.909	Astyanax_mexicanus
ENSKMAG00000003494	si:dkey-16l2.16	57	94.118	ENSCSEG00000009988	si:dkey-16l2.16	91	94.118	Cynoglossus_semilaevis
ENSKMAG00000003494	si:dkey-16l2.16	100	92.344	ENSCVAG00000003537	si:dkey-16l2.16	100	92.344	Cyprinodon_variegatus
ENSKMAG00000003494	si:dkey-16l2.16	100	89.474	ENSDARG00000037967	si:dkey-16l2.16	100	93.277	Danio_rerio
ENSKMAG00000003494	si:dkey-16l2.16	99	83.654	ENSELUG00000023247	si:dkey-16l2.16	99	82.212	Esox_lucius
ENSKMAG00000003494	si:dkey-16l2.16	57	91.597	ENSFHEG00000000767	si:dkey-16l2.16	77	90.756	Fundulus_heteroclitus
ENSKMAG00000003494	si:dkey-16l2.16	76	80.745	ENSGMOG00000015174	si:dkey-16l2.16	98	80.745	Gadus_morhua
ENSKMAG00000003494	si:dkey-16l2.16	100	86.603	ENSGAFG00000005388	si:dkey-16l2.16	100	86.603	Gambusia_affinis
ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	ENSGACG00000014915	si:dkey-16l2.16	98	90.909	Gasterosteus_aculeatus
ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	ENSHBUG00000019261	si:dkey-16l2.16	100	90.909	Haplochromis_burtoni
ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	ENSHCOG00000006538	si:dkey-16l2.16	100	90.431	Hippocampus_comes
ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	ENSLBEG00000007681	si:dkey-16l2.16	100	92.823	Labrus_bergylta
ENSKMAG00000003494	si:dkey-16l2.16	100	92.344	ENSMAMG00000019230	si:dkey-16l2.16	100	92.344	Mastacembelus_armatus
ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	ENSMZEG00005002081	si:dkey-16l2.16	100	90.431	Maylandia_zebra
ENSKMAG00000003494	si:dkey-16l2.16	99	91.748	ENSMMOG00000020140	si:dkey-16l2.16	97	91.748	Mola_mola
ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	ENSMALG00000014727	si:dkey-16l2.16	99	90.431	Monopterus_albus
ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	ENSNBRG00000008930	si:dkey-16l2.16	100	90.909	Neolamprologus_brichardi
ENSKMAG00000003494	si:dkey-16l2.16	100	90.431	ENSONIG00000009443	si:dkey-16l2.16	100	90.431	Oreochromis_niloticus
ENSKMAG00000003494	si:dkey-16l2.16	100	88.517	ENSORLG00000001098	si:dkey-16l2.16	99	84.689	Oryzias_latipes
ENSKMAG00000003494	si:dkey-16l2.16	100	88.517	ENSORLG00020000867	si:dkey-16l2.16	99	84.689	Oryzias_latipes_hni
ENSKMAG00000003494	si:dkey-16l2.16	100	85.646	ENSOMEG00000015474	si:dkey-16l2.16	100	85.646	Oryzias_melastigma
ENSKMAG00000003494	si:dkey-16l2.16	100	76.555	ENSPKIG00000018888	si:dkey-16l2.16	94	79.082	Paramormyrops_kingsleyae
ENSKMAG00000003494	si:dkey-16l2.16	100	88.517	ENSPKIG00000005686	-	100	88.517	Paramormyrops_kingsleyae
ENSKMAG00000003494	si:dkey-16l2.16	100	91.866	ENSPMGG00000000751	si:dkey-16l2.16	100	91.866	Periophthalmus_magnuspinnatus
ENSKMAG00000003494	si:dkey-16l2.16	100	87.081	ENSPFOG00000004746	si:dkey-16l2.16	100	87.081	Poecilia_formosa
ENSKMAG00000003494	si:dkey-16l2.16	100	86.603	ENSPLAG00000021043	si:dkey-16l2.16	100	86.603	Poecilia_latipinna
ENSKMAG00000003494	si:dkey-16l2.16	100	87.081	ENSPMEG00000007165	si:dkey-16l2.16	100	87.081	Poecilia_mexicana
ENSKMAG00000003494	si:dkey-16l2.16	100	86.603	ENSPREG00000005323	si:dkey-16l2.16	100	86.603	Poecilia_reticulata
ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	ENSPNYG00000009490	si:dkey-16l2.16	100	90.909	Pundamilia_nyererei
ENSKMAG00000003494	si:dkey-16l2.16	100	89.952	ENSPNAG00000018986	si:dkey-16l2.16	100	89.952	Pygocentrus_nattereri
ENSKMAG00000003494	si:dkey-16l2.16	100	88.038	ENSSFOG00015021448	-	100	88.038	Scleropages_formosus
ENSKMAG00000003494	si:dkey-16l2.16	99	77.404	ENSSFOG00015006414	-	85	80.226	Scleropages_formosus
ENSKMAG00000003494	si:dkey-16l2.16	100	86.058	ENSSMAG00000011769	si:dkey-16l2.16	94	86.058	Scophthalmus_maximus
ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	ENSSDUG00000005719	si:dkey-16l2.16	100	92.823	Seriola_dumerili
ENSKMAG00000003494	si:dkey-16l2.16	100	92.823	ENSSLDG00000003631	si:dkey-16l2.16	100	92.823	Seriola_lalandi_dorsalis
ENSKMAG00000003494	si:dkey-16l2.16	100	93.780	ENSSPAG00000006302	si:dkey-16l2.16	100	93.780	Stegastes_partitus
ENSKMAG00000003494	si:dkey-16l2.16	100	91.866	ENSTRUG00000025076	si:dkey-16l2.16	100	91.866	Takifugu_rubripes
ENSKMAG00000003494	si:dkey-16l2.16	100	91.866	ENSTNIG00000011300	si:dkey-16l2.16	100	91.866	Tetraodon_nigroviridis
ENSKMAG00000003494	si:dkey-16l2.16	100	87.081	ENSXMAG00000021767	si:dkey-16l2.16	100	87.081	Xiphophorus_maculatus