EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000003594 (Gene tree)
Gene ID: 108243954
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 14104 bases
Position: chrLWHD01000127.1:1175117-1189220
Accession: 108243954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004748	MIF4G_like	PF09088.11	2.2e-37	1	1
ENSKMAP00000004783	MIF4G_like	PF09088.11	8.1e-37	1	1
ENSKMAP00000004748	MIF4G_like_2	PF09090.11	1.7e-87	1	1
ENSKMAP00000004783	MIF4G	PF02854.19	2.9e-28	1	1
ENSKMAP00000004748	MIF4G	PF02854.19	1.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004869	NCBP1-202	1494	-	ENSKMAP00000004783	497 (aa)	-	-
ENSKMAT00000004835	NCBP1-201	2936	XM_017429729	ENSKMAP00000004748	795 (aa)	XP_017285218	UPI0007F90915

Gene Model

Click here to download ENSKMAG00000003594's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03013	RNA transport	KEGG
kmr03015	mRNA surveillance pathway	KEGG
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003594	NCBP1	99	86.179	ENSG00000136937	NCBP1	99	82.242	Homo_sapiens
ENSKMAG00000003594	NCBP1	100	95.597	ENSAPOG00000008002	NCBP1	100	95.597	Acanthochromis_polyacanthus
ENSKMAG00000003594	NCBP1	99	86.235	ENSAMEG00000004763	NCBP1	99	82.412	Ailuropoda_melanoleuca
ENSKMAG00000003594	NCBP1	99	96.138	ENSACIG00000000274	NCBP1	100	95.094	Amphilophus_citrinellus
ENSKMAG00000003594	NCBP1	100	95.597	ENSAOCG00000021148	NCBP1	100	95.597	Amphiprion_ocellaris
ENSKMAG00000003594	NCBP1	100	95.597	ENSAPEG00000001701	NCBP1	100	95.597	Amphiprion_percula
ENSKMAG00000003594	NCBP1	100	95.723	ENSATEG00000006929	NCBP1	100	95.723	Anabas_testudineus
ENSKMAG00000003594	NCBP1	95	82.763	ENSAPLG00000016318	NCBP1	99	82.895	Anas_platyrhynchos
ENSKMAG00000003594	NCBP1	99	86.965	ENSACAG00000004409	NCBP1	87	82.522	Anolis_carolinensis
ENSKMAG00000003594	NCBP1	99	83.130	ENSANAG00000025744	NCBP1	99	81.793	Aotus_nancymaae
ENSKMAG00000003594	NCBP1	100	94.340	ENSACLG00000014812	NCBP1	100	94.340	Astatotilapia_calliptera
ENSKMAG00000003594	NCBP1	99	91.242	ENSAMXG00000016364	NCBP1	100	89.962	Astyanax_mexicanus
ENSKMAG00000003594	NCBP1	99	86.382	ENSBTAG00000009732	NCBP1	99	86.707	Bos_taurus
ENSKMAG00000003594	NCBP1	97	42.680	WBGene00018156	ncbp-1	100	36.039	Caenorhabditis_elegans
ENSKMAG00000003594	NCBP1	99	86.382	ENSCJAG00000010840	NCBP1	99	85.903	Callithrix_jacchus
ENSKMAG00000003594	NCBP1	99	86.585	ENSCAFG00000002445	NCBP1	99	82.494	Canis_familiaris
ENSKMAG00000003594	NCBP1	97	86.458	ENSCAFG00020017997	NCBP1	96	87.562	Canis_lupus_dingo
ENSKMAG00000003594	NCBP1	99	86.179	ENSCHIG00000020139	NCBP1	99	82.242	Capra_hircus
ENSKMAG00000003594	NCBP1	83	85.401	ENSTSYG00000011914	NCBP1	98	85.893	Carlito_syrichta
ENSKMAG00000003594	NCBP1	84	75.540	ENSCAPG00000014252	NCBP1	90	74.149	Cavia_aperea
ENSKMAG00000003594	NCBP1	92	85.714	ENSCPOG00000012573	NCBP1	98	81.638	Cavia_porcellus
ENSKMAG00000003594	NCBP1	99	86.179	ENSCCAG00000032297	NCBP1	99	82.242	Cebus_capucinus
ENSKMAG00000003594	NCBP1	99	86.179	ENSCATG00000010052	NCBP1	99	82.242	Cercocebus_atys
ENSKMAG00000003594	NCBP1	99	86.179	ENSCLAG00000014339	NCBP1	99	82.242	Chinchilla_lanigera
ENSKMAG00000003594	NCBP1	99	86.179	ENSCSAG00000010929	NCBP1	99	82.242	Chlorocebus_sabaeus
ENSKMAG00000003594	NCBP1	99	79.065	ENSCHOG00000010332	NCBP1	91	77.119	Choloepus_hoffmanni
ENSKMAG00000003594	NCBP1	99	87.780	ENSCPBG00000024344	NCBP1	99	83.196	Chrysemys_picta_bellii
ENSKMAG00000003594	NCBP1	97	57.884	ENSCING00000008990	-	99	54.408	Ciona_intestinalis
ENSKMAG00000003594	NCBP1	97	57.377	ENSCSAVG00000005300	-	99	53.093	Ciona_savignyi
ENSKMAG00000003594	NCBP1	99	86.179	ENSCANG00000036913	NCBP1	99	82.242	Colobus_angolensis_palliatus
ENSKMAG00000003594	NCBP1	99	85.772	ENSCGRG00001015771	Ncbp1	99	81.990	Cricetulus_griseus_chok1gshd
ENSKMAG00000003594	NCBP1	97	85.833	ENSCGRG00000010311	Ncbp1	99	81.888	Cricetulus_griseus_crigri
ENSKMAG00000003594	NCBP1	99	96.545	ENSCSEG00000012377	NCBP1	100	94.843	Cynoglossus_semilaevis
ENSKMAG00000003594	NCBP1	100	95.603	ENSCVAG00000008795	NCBP1	100	95.603	Cyprinodon_variegatus
ENSKMAG00000003594	NCBP1	99	85.569	ENSDNOG00000006885	NCBP1	99	81.738	Dasypus_novemcinctus
ENSKMAG00000003594	NCBP1	99	79.839	ENSDORG00000013652	Ncbp1	99	78.321	Dipodomys_ordii
ENSKMAG00000003594	NCBP1	99	61.694	FBgn0022942	Cbp80	99	56.946	Drosophila_melanogaster
ENSKMAG00000003594	NCBP1	99	33.855	FBgn0038887	CG7907	87	33.726	Drosophila_melanogaster
ENSKMAG00000003594	NCBP1	89	78.139	ENSETEG00000009705	NCBP1	89	78.139	Echinops_telfairi
ENSKMAG00000003594	NCBP1	99	76.268	ENSEBUG00000008386	NCBP1	99	73.585	Eptatretus_burgeri
ENSKMAG00000003594	NCBP1	99	86.382	ENSEASG00005022795	NCBP1	99	81.990	Equus_asinus_asinus
ENSKMAG00000003594	NCBP1	99	86.585	ENSECAG00000013847	NCBP1	99	82.116	Equus_caballus
ENSKMAG00000003594	NCBP1	99	80.488	ENSEEUG00000015973	NCBP1	99	78.203	Erinaceus_europaeus
ENSKMAG00000003594	NCBP1	99	92.261	ENSELUG00000022519	NCBP1	100	90.452	Esox_lucius
ENSKMAG00000003594	NCBP1	99	86.382	ENSFCAG00000001206	NCBP1	99	82.368	Felis_catus
ENSKMAG00000003594	NCBP1	96	87.474	ENSFALG00000001193	NCBP1	99	83.842	Ficedula_albicollis
ENSKMAG00000003594	NCBP1	99	85.976	ENSFDAG00000010864	NCBP1	99	81.990	Fukomys_damarensis
ENSKMAG00000003594	NCBP1	100	95.729	ENSFHEG00000000655	NCBP1	100	95.729	Fundulus_heteroclitus
ENSKMAG00000003594	NCBP1	99	92.292	ENSGMOG00000008653	NCBP1	99	91.080	Gadus_morhua
ENSKMAG00000003594	NCBP1	96	87.265	ENSGALG00000002087	NCBP1	99	83.417	Gallus_gallus
ENSKMAG00000003594	NCBP1	100	96.231	ENSGAFG00000017787	NCBP1	100	96.231	Gambusia_affinis
ENSKMAG00000003594	NCBP1	100	93.358	ENSGACG00000016772	NCBP1	99	93.358	Gasterosteus_aculeatus
ENSKMAG00000003594	NCBP1	98	86.531	ENSGAGG00000019483	NCBP1	99	83.774	Gopherus_agassizii
ENSKMAG00000003594	NCBP1	99	86.179	ENSGGOG00000001376	NCBP1	99	82.242	Gorilla_gorilla
ENSKMAG00000003594	NCBP1	100	94.340	ENSHBUG00000020843	NCBP1	100	94.340	Haplochromis_burtoni
ENSKMAG00000003594	NCBP1	99	75.101	ENSHGLG00000018112	-	99	71.608	Heterocephalus_glaber_female
ENSKMAG00000003594	NCBP1	99	85.976	ENSHGLG00000001882	NCBP1	99	82.116	Heterocephalus_glaber_female
ENSKMAG00000003594	NCBP1	99	74.696	ENSHGLG00100017373	-	99	71.357	Heterocephalus_glaber_male
ENSKMAG00000003594	NCBP1	99	85.976	ENSHGLG00100013014	NCBP1	99	82.116	Heterocephalus_glaber_male
ENSKMAG00000003594	NCBP1	74	87.015	ENSHCOG00000000204	NCBP1	87	87.015	Hippocampus_comes
ENSKMAG00000003594	NCBP1	100	89.070	ENSIPUG00000007275	ncbp1	100	89.070	Ictalurus_punctatus
ENSKMAG00000003594	NCBP1	99	86.382	ENSSTOG00000002695	NCBP1	99	82.368	Ictidomys_tridecemlineatus
ENSKMAG00000003594	NCBP1	100	93.921	ENSLBEG00000011661	NCBP1	100	93.921	Labrus_bergylta
ENSKMAG00000003594	NCBP1	99	87.627	ENSLACG00000013955	NCBP1	99	77.985	Latimeria_chalumnae
ENSKMAG00000003594	NCBP1	99	76.090	ENSLOCG00000009579	NCBP1	99	76.588	Lepisosteus_oculatus
ENSKMAG00000003594	NCBP1	99	86.382	ENSLAFG00000005999	NCBP1	99	82.368	Loxodonta_africana
ENSKMAG00000003594	NCBP1	99	86.179	ENSMFAG00000030994	NCBP1	99	82.242	Macaca_fascicularis
ENSKMAG00000003594	NCBP1	97	85.714	ENSMMUG00000012281	NCBP1	99	82.011	Macaca_mulatta
ENSKMAG00000003594	NCBP1	99	86.179	ENSMNEG00000042790	NCBP1	99	82.242	Macaca_nemestrina
ENSKMAG00000003594	NCBP1	99	86.179	ENSMLEG00000030374	NCBP1	99	82.242	Mandrillus_leucophaeus
ENSKMAG00000003594	NCBP1	100	94.340	ENSMAMG00000014806	NCBP1	100	94.340	Mastacembelus_armatus
ENSKMAG00000003594	NCBP1	100	94.340	ENSMZEG00005003469	NCBP1	100	94.340	Maylandia_zebra
ENSKMAG00000003594	NCBP1	95	94.937	ENSMZEG00005009290	-	100	91.990	Maylandia_zebra
ENSKMAG00000003594	NCBP1	98	85.216	ENSMAUG00000020583	Ncbp1	99	81.392	Mesocricetus_auratus
ENSKMAG00000003594	NCBP1	99	85.772	ENSMICG00000012682	NCBP1	99	81.738	Microcebus_murinus
ENSKMAG00000003594	NCBP1	99	85.772	ENSMOCG00000015818	Ncbp1	99	81.864	Microtus_ochrogaster
ENSKMAG00000003594	NCBP1	91	92.649	ENSMMOG00000002610	NCBP1	100	92.649	Mola_mola
ENSKMAG00000003594	NCBP1	99	85.336	ENSMODG00000003202	NCBP1	99	81.486	Monodelphis_domestica
ENSKMAG00000003594	NCBP1	99	96.341	ENSMALG00000003547	NCBP1	100	95.220	Monopterus_albus
ENSKMAG00000003594	NCBP1	99	85.976	MGP_CAROLIEiJ_G0025982	Ncbp1	99	82.368	Mus_caroli
ENSKMAG00000003594	NCBP1	99	85.976	ENSMUSG00000028330	Ncbp1	99	82.368	Mus_musculus
ENSKMAG00000003594	NCBP1	99	85.976	MGP_PahariEiJ_G0028318	Ncbp1	99	82.368	Mus_pahari
ENSKMAG00000003594	NCBP1	99	85.976	MGP_SPRETEiJ_G0026945	Ncbp1	99	82.368	Mus_spretus
ENSKMAG00000003594	NCBP1	99	86.585	ENSMPUG00000006399	NCBP1	99	82.620	Mustela_putorius_furo
ENSKMAG00000003594	NCBP1	97	85.417	ENSMLUG00000015201	NCBP1	99	81.098	Myotis_lucifugus
ENSKMAG00000003594	NCBP1	99	85.569	ENSNGAG00000014101	Ncbp1	99	82.116	Nannospalax_galili
ENSKMAG00000003594	NCBP1	76	97.357	ENSNBRG00000014674	NCBP1	97	97.357	Neolamprologus_brichardi
ENSKMAG00000003594	NCBP1	99	86.179	ENSNLEG00000016909	NCBP1	99	82.242	Nomascus_leucogenys
ENSKMAG00000003594	NCBP1	96	80.585	ENSMEUG00000010672	NCBP1	90	80.585	Notamacropus_eugenii
ENSKMAG00000003594	NCBP1	84	73.401	ENSOPRG00000002144	-	88	74.242	Ochotona_princeps
ENSKMAG00000003594	NCBP1	99	85.976	ENSODEG00000003232	NCBP1	99	82.116	Octodon_degus
ENSKMAG00000003594	NCBP1	100	94.465	ENSONIG00000001502	NCBP1	100	94.465	Oreochromis_niloticus
ENSKMAG00000003594	NCBP1	97	88.542	ENSOANG00000001918	NCBP1	100	84.751	Ornithorhynchus_anatinus
ENSKMAG00000003594	NCBP1	99	86.032	ENSOCUG00000013853	NCBP1	97	81.609	Oryctolagus_cuniculus
ENSKMAG00000003594	NCBP1	100	94.869	ENSORLG00000011008	NCBP1	100	94.869	Oryzias_latipes
ENSKMAG00000003594	NCBP1	100	94.869	ENSORLG00020017455	NCBP1	100	94.869	Oryzias_latipes_hni
ENSKMAG00000003594	NCBP1	100	94.743	ENSORLG00015012127	NCBP1	100	94.743	Oryzias_latipes_hsok
ENSKMAG00000003594	NCBP1	100	94.869	ENSOMEG00000020698	NCBP1	100	94.869	Oryzias_melastigma
ENSKMAG00000003594	NCBP1	99	86.032	ENSOGAG00000013888	NCBP1	99	82.161	Otolemur_garnettii
ENSKMAG00000003594	NCBP1	99	86.179	ENSOARG00000011233	NCBP1	99	82.242	Ovis_aries
ENSKMAG00000003594	NCBP1	99	86.179	ENSPPAG00000026462	NCBP1	99	82.242	Pan_paniscus
ENSKMAG00000003594	NCBP1	99	86.585	ENSPPRG00000022574	NCBP1	99	82.494	Panthera_pardus
ENSKMAG00000003594	NCBP1	99	86.585	ENSPTIG00000018507	NCBP1	99	82.494	Panthera_tigris_altaica
ENSKMAG00000003594	NCBP1	99	86.179	ENSPTRG00000021167	NCBP1	99	82.242	Pan_troglodytes
ENSKMAG00000003594	NCBP1	99	86.179	ENSPANG00000025591	NCBP1	99	82.242	Papio_anubis
ENSKMAG00000003594	NCBP1	99	89.431	ENSPKIG00000015861	NCBP1	99	87.154	Paramormyrops_kingsleyae
ENSKMAG00000003594	NCBP1	64	80.822	ENSPSIG00000009558	NCBP1	99	81.836	Pelodiscus_sinensis
ENSKMAG00000003594	NCBP1	100	90.704	ENSPMGG00000020476	NCBP1	100	90.704	Periophthalmus_magnuspinnatus
ENSKMAG00000003594	NCBP1	99	85.569	ENSPEMG00000020105	Ncbp1	99	81.864	Peromyscus_maniculatus_bairdii
ENSKMAG00000003594	NCBP1	92	79.130	ENSPMAG00000005533	NCBP1	99	68.125	Petromyzon_marinus
ENSKMAG00000003594	NCBP1	99	85.336	ENSPCIG00000015800	NCBP1	99	84.141	Phascolarctos_cinereus
ENSKMAG00000003594	NCBP1	100	95.620	ENSPFOG00000004158	NCBP1	100	95.620	Poecilia_formosa
ENSKMAG00000003594	NCBP1	100	96.231	ENSPLAG00000020002	NCBP1	100	96.231	Poecilia_latipinna
ENSKMAG00000003594	NCBP1	100	95.980	ENSPMEG00000019821	NCBP1	100	95.980	Poecilia_mexicana
ENSKMAG00000003594	NCBP1	100	96.361	ENSPREG00000006035	NCBP1	100	96.361	Poecilia_reticulata
ENSKMAG00000003594	NCBP1	99	86.179	ENSPPYG00000019426	NCBP1	99	82.242	Pongo_abelii
ENSKMAG00000003594	NCBP1	90	79.456	ENSPCAG00000009943	NCBP1	90	79.456	Procavia_capensis
ENSKMAG00000003594	NCBP1	82	87.500	ENSPCOG00000020024	NCBP1	98	87.500	Propithecus_coquereli
ENSKMAG00000003594	NCBP1	99	86.179	ENSPVAG00000005924	NCBP1	99	82.116	Pteropus_vampyrus
ENSKMAG00000003594	NCBP1	91	93.056	ENSPNYG00000002140	NCBP1	99	93.056	Pundamilia_nyererei
ENSKMAG00000003594	NCBP1	100	89.711	ENSPNAG00000027753	NCBP1	100	89.711	Pygocentrus_nattereri
ENSKMAG00000003594	NCBP1	99	85.976	ENSRNOG00000023605	Ncbp1	99	82.368	Rattus_norvegicus
ENSKMAG00000003594	NCBP1	99	86.179	ENSRBIG00000043175	NCBP1	99	82.242	Rhinopithecus_bieti
ENSKMAG00000003594	NCBP1	99	86.179	ENSRROG00000029767	NCBP1	99	82.242	Rhinopithecus_roxellana
ENSKMAG00000003594	NCBP1	99	86.179	ENSSBOG00000019378	NCBP1	98	86.585	Saimiri_boliviensis_boliviensis
ENSKMAG00000003594	NCBP1	70	76.718	ENSSHAG00000015882	NCBP1	73	77.863	Sarcophilus_harrisii
ENSKMAG00000003594	NCBP1	97	87.917	ENSSFOG00015001872	NCBP1	99	85.390	Scleropages_formosus
ENSKMAG00000003594	NCBP1	100	93.711	ENSSMAG00000007463	NCBP1	100	93.711	Scophthalmus_maximus
ENSKMAG00000003594	NCBP1	100	94.340	ENSSDUG00000007019	NCBP1	100	95.199	Seriola_dumerili
ENSKMAG00000003594	NCBP1	100	95.346	ENSSLDG00000021924	NCBP1	100	95.346	Seriola_lalandi_dorsalis
ENSKMAG00000003594	NCBP1	85	70.563	ENSSARG00000007274	NCBP1	86	71.645	Sorex_araneus
ENSKMAG00000003594	NCBP1	99	77.347	ENSSPUG00000008609	NCBP1	99	77.204	Sphenodon_punctatus
ENSKMAG00000003594	NCBP1	100	96.226	ENSSPAG00000012550	NCBP1	100	96.226	Stegastes_partitus
ENSKMAG00000003594	NCBP1	99	86.382	ENSSSCG00000005366	NCBP1	99	82.242	Sus_scrofa
ENSKMAG00000003594	NCBP1	99	78.411	ENSTGUG00000001472	NCBP1	99	79.119	Taeniopygia_guttata
ENSKMAG00000003594	NCBP1	99	94.309	ENSTRUG00000005287	NCBP1	100	93.208	Takifugu_rubripes
ENSKMAG00000003594	NCBP1	99	85.976	ENSTBEG00000004035	NCBP1	99	79.849	Tupaia_belangeri
ENSKMAG00000003594	NCBP1	88	84.729	ENSTTRG00000000507	NCBP1	88	84.729	Tursiops_truncatus
ENSKMAG00000003594	NCBP1	99	86.382	ENSUAMG00000005471	NCBP1	99	82.368	Ursus_americanus
ENSKMAG00000003594	NCBP1	95	83.191	ENSUMAG00000011865	NCBP1	99	81.805	Ursus_maritimus
ENSKMAG00000003594	NCBP1	99	80.691	ENSVPAG00000010537	NCBP1	99	78.841	Vicugna_pacos
ENSKMAG00000003594	NCBP1	99	86.585	ENSVVUG00000019725	NCBP1	99	82.494	Vulpes_vulpes
ENSKMAG00000003594	NCBP1	99	81.874	ENSXETG00000010179	ncbp1	99	79.345	Xenopus_tropicalis
ENSKMAG00000003594	NCBP1	100	95.980	ENSXMAG00000018253	NCBP1	100	95.980	Xiphophorus_maculatus