EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000003620 (Gene tree)
Gene ID: 108251574
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 7966 bases
Position: chrLWHD01000938.1:23672-31637
Accession: 108251574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004787	HAT	PF02184.16	3.8e-36	1	2
ENSKMAP00000004787	HAT	PF02184.16	3.8e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000004873	-	2946	XM_025003061	ENSKMAP00000004787	783 (aa)	XP_024858829	UPI000D530B09

Gene Model

Click here to download ENSKMAG00000003620's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003620	crnkl1	86	86.431	ENSG00000101343	CRNKL1	99	86.431	Homo_sapiens
ENSKMAG00000003620	crnkl1	96	86.216	ENSAPOG00000009705	crnkl1	99	92.566	Acanthochromis_polyacanthus
ENSKMAG00000003620	crnkl1	86	86.558	ENSAMEG00000000270	CRNKL1	82	86.657	Ailuropoda_melanoleuca
ENSKMAG00000003620	crnkl1	90	89.014	ENSACIG00000015267	crnkl1	96	88.366	Amphilophus_citrinellus
ENSKMAG00000003620	crnkl1	93	90.345	ENSAOCG00000021964	crnkl1	96	91.010	Amphiprion_ocellaris
ENSKMAG00000003620	crnkl1	90	92.614	ENSAPEG00000015041	crnkl1	96	91.298	Amphiprion_percula
ENSKMAG00000003620	crnkl1	90	89.548	ENSATEG00000001068	crnkl1	95	88.504	Anabas_testudineus
ENSKMAG00000003620	crnkl1	83	87.289	ENSAPLG00000013105	CRNKL1	97	85.757	Anas_platyrhynchos
ENSKMAG00000003620	crnkl1	88	86.754	ENSACAG00000005284	CRNKL1	99	86.754	Anolis_carolinensis
ENSKMAG00000003620	crnkl1	80	86.984	ENSANAG00000024889	CRNKL1	99	86.984	Aotus_nancymaae
ENSKMAG00000003620	crnkl1	89	91.834	ENSACLG00000010813	crnkl1	96	89.931	Astatotilapia_calliptera
ENSKMAG00000003620	crnkl1	85	91.729	ENSAMXG00000018334	crnkl1	96	87.360	Astyanax_mexicanus
ENSKMAG00000003620	crnkl1	87	86.317	ENSBTAG00000008472	CRNKL1	99	86.317	Bos_taurus
ENSKMAG00000003620	crnkl1	82	63.764	WBGene00019762	M03F8.3	98	59.537	Caenorhabditis_elegans
ENSKMAG00000003620	crnkl1	86	86.667	ENSCJAG00000005393	CRNKL1	98	86.667	Callithrix_jacchus
ENSKMAG00000003620	crnkl1	86	86.558	ENSCAFG00000005333	CRNKL1	94	86.657	Canis_familiaris
ENSKMAG00000003620	crnkl1	86	86.657	ENSCAFG00020027488	CRNKL1	99	86.657	Canis_lupus_dingo
ENSKMAG00000003620	crnkl1	87	85.444	ENSCHIG00000013171	CRNKL1	99	85.444	Capra_hircus
ENSKMAG00000003620	crnkl1	88	85.444	ENSTSYG00000004197	CRNKL1	99	85.444	Carlito_syrichta
ENSKMAG00000003620	crnkl1	81	84.330	ENSCAPG00000010501	CRNKL1	99	84.330	Cavia_aperea
ENSKMAG00000003620	crnkl1	86	85.924	ENSCPOG00000004418	CRNKL1	99	85.924	Cavia_porcellus
ENSKMAG00000003620	crnkl1	86	86.578	ENSCCAG00000027037	CRNKL1	99	86.578	Cebus_capucinus
ENSKMAG00000003620	crnkl1	86	86.283	ENSCATG00000034247	CRNKL1	99	86.283	Cercocebus_atys
ENSKMAG00000003620	crnkl1	86	86.217	ENSCLAG00000013859	CRNKL1	99	86.217	Chinchilla_lanigera
ENSKMAG00000003620	crnkl1	86	86.283	ENSCSAG00000011434	CRNKL1	99	86.283	Chlorocebus_sabaeus
ENSKMAG00000003620	crnkl1	86	85.820	ENSCHOG00000006371	CRNKL1	83	85.924	Choloepus_hoffmanni
ENSKMAG00000003620	crnkl1	86	87.740	ENSCPBG00000023501	CRNKL1	98	87.834	Chrysemys_picta_bellii
ENSKMAG00000003620	crnkl1	85	69.127	ENSCING00000002709	-	99	67.836	Ciona_intestinalis
ENSKMAG00000003620	crnkl1	86	86.283	ENSCANG00000038789	CRNKL1	99	86.283	Colobus_angolensis_palliatus
ENSKMAG00000003620	crnkl1	87	85.714	ENSCGRG00001001115	-	99	85.486	Cricetulus_griseus_chok1gshd
ENSKMAG00000003620	crnkl1	87	85.714	ENSCGRG00001000687	-	99	85.486	Cricetulus_griseus_chok1gshd
ENSKMAG00000003620	crnkl1	87	85.714	ENSCGRG00000007854	Crnkl1	99	85.486	Cricetulus_griseus_crigri
ENSKMAG00000003620	crnkl1	96	85.695	ENSCSEG00000005594	crnkl1	89	90.638	Cynoglossus_semilaevis
ENSKMAG00000003620	crnkl1	85	95.210	ENSCVAG00000015172	crnkl1	97	91.111	Cyprinodon_variegatus
ENSKMAG00000003620	crnkl1	85	91.855	ENSDARG00000007901	crnkl1	96	87.517	Danio_rerio
ENSKMAG00000003620	crnkl1	86	86.384	ENSDNOG00000016226	CRNKL1	95	86.384	Dasypus_novemcinctus
ENSKMAG00000003620	crnkl1	85	80.269	ENSDORG00000023724	-	99	80.269	Dipodomys_ordii
ENSKMAG00000003620	crnkl1	86	79.583	ENSDORG00000030174	-	99	79.583	Dipodomys_ordii
ENSKMAG00000003620	crnkl1	86	84.302	ENSDORG00000000394	-	99	84.302	Dipodomys_ordii
ENSKMAG00000003620	crnkl1	86	68.676	FBgn0000377	crn	99	67.719	Drosophila_melanogaster
ENSKMAG00000003620	crnkl1	85	76.577	ENSETEG00000003711	CRNKL1	81	76.577	Echinops_telfairi
ENSKMAG00000003620	crnkl1	88	61.584	ENSEBUG00000013461	crnkl1	97	56.686	Eptatretus_burgeri
ENSKMAG00000003620	crnkl1	86	86.657	ENSEASG00005002072	CRNKL1	99	86.657	Equus_asinus_asinus
ENSKMAG00000003620	crnkl1	86	86.657	ENSECAG00000022215	CRNKL1	99	86.657	Equus_caballus
ENSKMAG00000003620	crnkl1	86	83.752	ENSEEUG00000000413	CRNKL1	92	83.871	Erinaceus_europaeus
ENSKMAG00000003620	crnkl1	85	91.031	ENSELUG00000015424	crnkl1	98	88.712	Esox_lucius
ENSKMAG00000003620	crnkl1	86	86.657	ENSFCAG00000000714	CRNKL1	99	86.657	Felis_catus
ENSKMAG00000003620	crnkl1	85	85.501	ENSFALG00000004611	CRNKL1	99	85.501	Ficedula_albicollis
ENSKMAG00000003620	crnkl1	86	86.530	ENSFDAG00000000604	CRNKL1	99	86.510	Fukomys_damarensis
ENSKMAG00000003620	crnkl1	97	86.292	ENSFHEG00000013163	crnkl1	94	90.997	Fundulus_heteroclitus
ENSKMAG00000003620	crnkl1	85	89.820	ENSGMOG00000007609	crnkl1	94	88.987	Gadus_morhua
ENSKMAG00000003620	crnkl1	86	87.149	ENSGALG00000008429	CRNKL1	99	87.149	Gallus_gallus
ENSKMAG00000003620	crnkl1	100	82.545	ENSGAFG00000014249	crnkl1	94	90.682	Gambusia_affinis
ENSKMAG00000003620	crnkl1	91	87.967	ENSGACG00000011852	crnkl1	97	88.000	Gasterosteus_aculeatus
ENSKMAG00000003620	crnkl1	82	86.090	ENSGAGG00000021233	CRNKL1	99	86.090	Gopherus_agassizii
ENSKMAG00000003620	crnkl1	86	86.431	ENSGGOG00000014176	CRNKL1	99	86.431	Gorilla_gorilla
ENSKMAG00000003620	crnkl1	91	89.409	ENSHBUG00000005246	crnkl1	96	89.655	Haplochromis_burtoni
ENSKMAG00000003620	crnkl1	86	86.510	ENSHGLG00000010856	CRNKL1	99	86.510	Heterocephalus_glaber_female
ENSKMAG00000003620	crnkl1	86	86.510	ENSHGLG00100011521	CRNKL1	99	86.510	Heterocephalus_glaber_male
ENSKMAG00000003620	crnkl1	85	89.955	ENSHCOG00000006420	crnkl1	99	87.536	Hippocampus_comes
ENSKMAG00000003620	crnkl1	81	70.755	ENSIPUG00000000315	-	99	71.969	Ictalurus_punctatus
ENSKMAG00000003620	crnkl1	88	86.026	ENSIPUG00000006751	crnkl1	96	85.489	Ictalurus_punctatus
ENSKMAG00000003620	crnkl1	85	76.772	ENSIPUG00000006836	-	99	75.847	Ictalurus_punctatus
ENSKMAG00000003620	crnkl1	86	86.364	ENSSTOG00000014747	CRNKL1	99	86.364	Ictidomys_tridecemlineatus
ENSKMAG00000003620	crnkl1	86	84.097	ENSJJAG00000016926	Crnkl1	99	84.097	Jaculus_jaculus
ENSKMAG00000003620	crnkl1	85	74.612	ENSLBEG00000003543	crnkl1	93	73.963	Labrus_bergylta
ENSKMAG00000003620	crnkl1	86	88.410	ENSLACG00000001129	CRNKL1	100	87.172	Latimeria_chalumnae
ENSKMAG00000003620	crnkl1	85	91.429	ENSLOCG00000016889	crnkl1	99	86.573	Lepisosteus_oculatus
ENSKMAG00000003620	crnkl1	86	85.652	ENSLAFG00000004512	CRNKL1	99	86.384	Loxodonta_africana
ENSKMAG00000003620	crnkl1	86	86.283	ENSMFAG00000039893	CRNKL1	99	86.283	Macaca_fascicularis
ENSKMAG00000003620	crnkl1	86	86.283	ENSMMUG00000007709	CRNKL1	99	86.283	Macaca_mulatta
ENSKMAG00000003620	crnkl1	86	86.283	ENSMNEG00000037490	CRNKL1	99	86.283	Macaca_nemestrina
ENSKMAG00000003620	crnkl1	86	86.283	ENSMLEG00000034885	CRNKL1	99	86.283	Mandrillus_leucophaeus
ENSKMAG00000003620	crnkl1	90	90.084	ENSMAMG00000008757	crnkl1	95	90.014	Mastacembelus_armatus
ENSKMAG00000003620	crnkl1	94	88.564	ENSMZEG00005022345	crnkl1	96	89.793	Maylandia_zebra
ENSKMAG00000003620	crnkl1	85	87.725	ENSMGAG00000003452	CRNKL1	92	87.725	Meleagris_gallopavo
ENSKMAG00000003620	crnkl1	87	85.714	ENSMAUG00000020764	Crnkl1	99	85.486	Mesocricetus_auratus
ENSKMAG00000003620	crnkl1	86	86.686	ENSMICG00000006048	CRNKL1	98	86.686	Microcebus_murinus
ENSKMAG00000003620	crnkl1	85	62.801	ENSMOCG00000004179	-	95	63.024	Microtus_ochrogaster
ENSKMAG00000003620	crnkl1	87	77.937	ENSMOCG00000000681	-	99	77.746	Microtus_ochrogaster
ENSKMAG00000003620	crnkl1	81	90.190	ENSMMOG00000017601	crnkl1	97	90.190	Mola_mola
ENSKMAG00000003620	crnkl1	86	80.945	ENSMODG00000010857	-	98	80.945	Monodelphis_domestica
ENSKMAG00000003620	crnkl1	86	83.502	ENSMODG00000005961	-	98	83.502	Monodelphis_domestica
ENSKMAG00000003620	crnkl1	91	62.622	ENSMALG00000011211	crnkl1	95	71.151	Monopterus_albus
ENSKMAG00000003620	crnkl1	88	85.486	MGP_CAROLIEiJ_G0024394	Crnkl1	99	85.486	Mus_caroli
ENSKMAG00000003620	crnkl1	87	85.714	ENSMUSG00000001767	Crnkl1	99	85.714	Mus_musculus
ENSKMAG00000003620	crnkl1	87	84.548	MGP_PahariEiJ_G0025838	Crnkl1	99	84.548	Mus_pahari
ENSKMAG00000003620	crnkl1	87	85.714	MGP_SPRETEiJ_G0025312	Crnkl1	99	85.714	Mus_spretus
ENSKMAG00000003620	crnkl1	86	86.657	ENSMPUG00000001226	CRNKL1	99	86.657	Mustela_putorius_furo
ENSKMAG00000003620	crnkl1	86	86.136	ENSMLUG00000016513	CRNKL1	88	86.237	Myotis_lucifugus
ENSKMAG00000003620	crnkl1	86	84.029	ENSNGAG00000023097	Crnkl1	99	84.029	Nannospalax_galili
ENSKMAG00000003620	crnkl1	89	91.977	ENSNBRG00000007867	crnkl1	96	90.069	Neolamprologus_brichardi
ENSKMAG00000003620	crnkl1	86	83.333	ENSNLEG00000009862	CRNKL1	99	83.333	Nomascus_leucogenys
ENSKMAG00000003620	crnkl1	85	82.159	ENSMEUG00000002361	-	97	82.159	Notamacropus_eugenii
ENSKMAG00000003620	crnkl1	84	86.207	ENSMEUG00000012167	-	99	86.207	Notamacropus_eugenii
ENSKMAG00000003620	crnkl1	75	58.755	ENSOPRG00000009242	-	61	58.755	Ochotona_princeps
ENSKMAG00000003620	crnkl1	86	86.070	ENSODEG00000012175	CRNKL1	99	86.070	Octodon_degus
ENSKMAG00000003620	crnkl1	92	89.875	ENSONIG00000018728	crnkl1	96	90.345	Oreochromis_niloticus
ENSKMAG00000003620	crnkl1	86	85.147	ENSOCUG00000015484	CRNKL1	83	85.839	Oryctolagus_cuniculus
ENSKMAG00000003620	crnkl1	90	88.494	ENSORLG00000017240	crnkl1	96	87.258	Oryzias_latipes
ENSKMAG00000003620	crnkl1	90	88.636	ENSORLG00020001742	crnkl1	96	87.396	Oryzias_latipes_hni
ENSKMAG00000003620	crnkl1	88	90.247	ENSORLG00015019564	crnkl1	97	87.155	Oryzias_latipes_hsok
ENSKMAG00000003620	crnkl1	90	89.915	ENSOMEG00000019895	crnkl1	96	88.643	Oryzias_melastigma
ENSKMAG00000003620	crnkl1	86	86.538	ENSOGAG00000011544	CRNKL1	98	86.538	Otolemur_garnettii
ENSKMAG00000003620	crnkl1	86	86.364	ENSOARG00000002150	CRNKL1	89	86.463	Ovis_aries
ENSKMAG00000003620	crnkl1	86	85.290	ENSPPAG00000027847	CRNKL1	82	85.398	Pan_paniscus
ENSKMAG00000003620	crnkl1	86	86.657	ENSPPRG00000001955	CRNKL1	99	86.657	Panthera_pardus
ENSKMAG00000003620	crnkl1	86	86.657	ENSPTIG00000007393	CRNKL1	99	86.657	Panthera_tigris_altaica
ENSKMAG00000003620	crnkl1	86	86.431	ENSPTRG00000030609	CRNKL1	99	86.431	Pan_troglodytes
ENSKMAG00000003620	crnkl1	86	86.283	ENSPANG00000017420	CRNKL1	99	86.283	Papio_anubis
ENSKMAG00000003620	crnkl1	85	86.186	ENSPKIG00000017093	crnkl1	92	82.700	Paramormyrops_kingsleyae
ENSKMAG00000003620	crnkl1	86	86.499	ENSPSIG00000012705	CRNKL1	98	86.499	Pelodiscus_sinensis
ENSKMAG00000003620	crnkl1	89	84.006	ENSPMGG00000006263	crnkl1	97	84.211	Periophthalmus_magnuspinnatus
ENSKMAG00000003620	crnkl1	87	86.006	ENSPEMG00000000073	-	99	85.776	Peromyscus_maniculatus_bairdii
ENSKMAG00000003620	crnkl1	88	81.621	ENSPMAG00000002250	crnkl1	99	81.621	Petromyzon_marinus
ENSKMAG00000003620	crnkl1	86	85.652	ENSPCIG00000025825	CRNKL1	95	85.652	Phascolarctos_cinereus
ENSKMAG00000003620	crnkl1	98	94.478	ENSPFOG00000005102	crnkl1	97	90.656	Poecilia_formosa
ENSKMAG00000003620	crnkl1	98	94.478	ENSPLAG00000007288	crnkl1	93	90.529	Poecilia_latipinna
ENSKMAG00000003620	crnkl1	96	94.627	ENSPMEG00000008865	crnkl1	97	90.795	Poecilia_mexicana
ENSKMAG00000003620	crnkl1	98	94.469	ENSPREG00000012615	crnkl1	97	89.627	Poecilia_reticulata
ENSKMAG00000003620	crnkl1	86	86.181	ENSPPYG00000010747	CRNKL1	80	86.283	Pongo_abelii
ENSKMAG00000003620	crnkl1	86	81.471	ENSPCAG00000003296	CRNKL1	85	81.606	Procavia_capensis
ENSKMAG00000003620	crnkl1	85	85.395	ENSPCOG00000017608	CRNKL1	82	85.503	Propithecus_coquereli
ENSKMAG00000003620	crnkl1	86	86.411	ENSPVAG00000006207	CRNKL1	83	86.510	Pteropus_vampyrus
ENSKMAG00000003620	crnkl1	89	91.691	ENSPNYG00000001977	crnkl1	96	89.793	Pundamilia_nyererei
ENSKMAG00000003620	crnkl1	89	89.914	ENSPNAG00000001507	crnkl1	96	88.531	Pygocentrus_nattereri
ENSKMAG00000003620	crnkl1	87	85.714	ENSRNOG00000010587	Crnkl1	99	85.714	Rattus_norvegicus
ENSKMAG00000003620	crnkl1	87	85.569	ENSRNOG00000040045	Crnkl1	99	85.569	Rattus_norvegicus
ENSKMAG00000003620	crnkl1	86	86.283	ENSRBIG00000031770	CRNKL1	99	86.283	Rhinopithecus_bieti
ENSKMAG00000003620	crnkl1	86	86.136	ENSRROG00000040450	CRNKL1	99	86.136	Rhinopithecus_roxellana
ENSKMAG00000003620	crnkl1	83	37.771	YLR117C	CLF1	99	37.771	Saccharomyces_cerevisiae
ENSKMAG00000003620	crnkl1	88	85.735	ENSSBOG00000029672	CRNKL1	99	85.735	Saimiri_boliviensis_boliviensis
ENSKMAG00000003620	crnkl1	84	70.152	ENSSHAG00000011199	CRNKL1	99	70.152	Sarcophilus_harrisii
ENSKMAG00000003620	crnkl1	85	89.894	ENSSFOG00015000946	crnkl1	94	84.444	Scleropages_formosus
ENSKMAG00000003620	crnkl1	99	84.903	ENSSMAG00000007933	crnkl1	92	90.806	Scophthalmus_maximus
ENSKMAG00000003620	crnkl1	91	84.572	ENSSDUG00000012625	crnkl1	93	84.232	Seriola_dumerili
ENSKMAG00000003620	crnkl1	91	91.298	ENSSLDG00000021413	crnkl1	94	91.551	Seriola_lalandi_dorsalis
ENSKMAG00000003620	crnkl1	86	85.484	ENSSARG00000006443	CRNKL1	82	85.484	Sorex_araneus
ENSKMAG00000003620	crnkl1	88	85.838	ENSSPUG00000005254	CRNKL1	100	85.838	Sphenodon_punctatus
ENSKMAG00000003620	crnkl1	90	92.898	ENSSPAG00000016150	crnkl1	93	91.298	Stegastes_partitus
ENSKMAG00000003620	crnkl1	88	85.818	ENSSSCG00000038587	CRNKL1	99	85.818	Sus_scrofa
ENSKMAG00000003620	crnkl1	86	85.965	ENSTGUG00000007645	CRNKL1	98	85.965	Taeniopygia_guttata
ENSKMAG00000003620	crnkl1	90	81.740	ENSTRUG00000015417	crnkl1	95	81.933	Takifugu_rubripes
ENSKMAG00000003620	crnkl1	85	89.238	ENSTNIG00000010710	crnkl1	99	87.737	Tetraodon_nigroviridis
ENSKMAG00000003620	crnkl1	80	85.280	ENSTBEG00000001304	CRNKL1	82	85.397	Tupaia_belangeri
ENSKMAG00000003620	crnkl1	80	82.880	ENSTTRG00000000484	CRNKL1	81	83.016	Tursiops_truncatus
ENSKMAG00000003620	crnkl1	86	86.657	ENSUAMG00000018586	CRNKL1	99	86.657	Ursus_americanus
ENSKMAG00000003620	crnkl1	86	86.657	ENSUMAG00000024957	CRNKL1	99	86.657	Ursus_maritimus
ENSKMAG00000003620	crnkl1	86	86.558	ENSVVUG00000012559	CRNKL1	82	86.657	Vulpes_vulpes
ENSKMAG00000003620	crnkl1	88	85.962	ENSXETG00000009698	crnkl1	100	85.362	Xenopus_tropicalis
ENSKMAG00000003620	crnkl1	86	93.294	ENSXCOG00000000824	crnkl1	97	88.705	Xiphophorus_couchianus
ENSKMAG00000003620	crnkl1	86	94.478	ENSXMAG00000006896	crnkl1	97	89.793	Xiphophorus_maculatus