EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003665 (Gene tree)
Gene ID: 108236541
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 12425 bases
Position: chrLWHD01000040.1:1511524-1523948
Accession: 108236541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000004978	ResIII	PF04851.15	4.8e-16	1	1
ENSKMAP00000004978	DEAD	PF00270.29	8.4e-37	1	2
ENSKMAP00000004978	DEAD	PF00270.29	8.4e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005063	-	6276	XM_017417247	ENSKMAP00000004978	2091 (aa)	XP_017272736	-

Gene Model

Click here to download ENSKMAG00000003665's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003665	snrnp200	64	31.295	ENSKMAG00000002282	hfm1	77	31.295
ENSKMAG00000003665	snrnp200	87	41.780	ENSKMAG00000003953	ascc3	88	41.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003665	snrnp200	99	87.541	ENSG00000144028	SNRNP200	99	90.460	Homo_sapiens
ENSKMAG00000003665	snrnp200	100	94.774	ENSAPOG00000010223	snrnp200	100	94.774	Acanthochromis_polyacanthus
ENSKMAG00000003665	snrnp200	99	87.587	ENSAMEG00000008996	SNRNP200	100	87.587	Ailuropoda_melanoleuca
ENSKMAG00000003665	snrnp200	97	93.967	ENSACIG00000001764	snrnp200	98	93.967	Amphilophus_citrinellus
ENSKMAG00000003665	snrnp200	100	94.494	ENSAOCG00000024593	snrnp200	100	94.494	Amphiprion_ocellaris
ENSKMAG00000003665	snrnp200	97	93.486	ENSAPEG00000012554	snrnp200	100	93.486	Amphiprion_percula
ENSKMAG00000003665	snrnp200	100	94.634	ENSATEG00000022522	snrnp200	100	94.634	Anabas_testudineus
ENSKMAG00000003665	snrnp200	99	87.735	ENSAPLG00000004313	SNRNP200	100	87.735	Anas_platyrhynchos
ENSKMAG00000003665	snrnp200	99	86.493	ENSACAG00000000434	SNRNP200	100	86.493	Anolis_carolinensis
ENSKMAG00000003665	snrnp200	99	84.125	ENSANAG00000036625	SNRNP200	100	83.706	Aotus_nancymaae
ENSKMAG00000003665	snrnp200	100	94.260	ENSACLG00000011188	snrnp200	100	94.260	Astatotilapia_calliptera
ENSKMAG00000003665	snrnp200	99	91.706	ENSAMXG00000005684	snrnp200	100	91.647	Astyanax_mexicanus
ENSKMAG00000003665	snrnp200	99	87.354	ENSBTAG00000000848	SNRNP200	100	87.354	Bos_taurus
ENSKMAG00000003665	snrnp200	99	87.541	ENSCJAG00000007514	SNRNP200	100	87.541	Callithrix_jacchus
ENSKMAG00000003665	snrnp200	99	88.761	ENSCAFG00020019979	SNRNP200	100	88.761	Canis_lupus_dingo
ENSKMAG00000003665	snrnp200	99	87.448	ENSCHIG00000020611	SNRNP200	100	87.448	Capra_hircus
ENSKMAG00000003665	snrnp200	99	87.587	ENSTSYG00000010467	SNRNP200	100	87.587	Carlito_syrichta
ENSKMAG00000003665	snrnp200	99	87.067	ENSCAPG00000017234	SNRNP200	99	87.067	Cavia_aperea
ENSKMAG00000003665	snrnp200	99	87.401	ENSCPOG00000006776	SNRNP200	100	87.401	Cavia_porcellus
ENSKMAG00000003665	snrnp200	99	87.541	ENSCCAG00000033962	SNRNP200	100	87.541	Cebus_capucinus
ENSKMAG00000003665	snrnp200	99	87.541	ENSCATG00000015790	SNRNP200	100	87.541	Cercocebus_atys
ENSKMAG00000003665	snrnp200	99	87.448	ENSCLAG00000004116	SNRNP200	100	87.448	Chinchilla_lanigera
ENSKMAG00000003665	snrnp200	99	87.541	ENSCSAG00000017369	SNRNP200	100	87.541	Chlorocebus_sabaeus
ENSKMAG00000003665	snrnp200	76	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSKMAG00000003665	snrnp200	99	89.861	ENSCPBG00000022571	SNRNP200	100	89.861	Chrysemys_picta_bellii
ENSKMAG00000003665	snrnp200	99	73.628	ENSCING00000005082	-	99	73.721	Ciona_intestinalis
ENSKMAG00000003665	snrnp200	99	82.216	ENSCANG00000033932	SNRNP200	100	87.054	Colobus_angolensis_palliatus
ENSKMAG00000003665	snrnp200	99	87.541	ENSCGRG00001022610	Snrnp200	100	87.541	Cricetulus_griseus_chok1gshd
ENSKMAG00000003665	snrnp200	99	87.046	ENSCGRG00000016472	Snrnp200	100	87.046	Cricetulus_griseus_crigri
ENSKMAG00000003665	snrnp200	99	94.860	ENSCSEG00000016399	snrnp200	100	94.860	Cynoglossus_semilaevis
ENSKMAG00000003665	snrnp200	100	94.261	ENSCVAG00000017631	snrnp200	100	94.261	Cyprinodon_variegatus
ENSKMAG00000003665	snrnp200	100	91.694	ENSDARG00000077536	snrnp200	100	91.694	Danio_rerio
ENSKMAG00000003665	snrnp200	99	86.281	ENSDNOG00000011227	SNRNP200	100	86.281	Dasypus_novemcinctus
ENSKMAG00000003665	snrnp200	99	85.095	ENSDORG00000005861	Snrnp200	100	85.095	Dipodomys_ordii
ENSKMAG00000003665	snrnp200	100	71.601	FBgn0263599	l(3)72Ab	100	71.601	Drosophila_melanogaster
ENSKMAG00000003665	snrnp200	95	87.765	ENSETEG00000000162	SNRNP200	74	87.765	Echinops_telfairi
ENSKMAG00000003665	snrnp200	83	76.381	ENSEBUG00000016524	snrnp200	95	76.381	Eptatretus_burgeri
ENSKMAG00000003665	snrnp200	99	86.571	ENSEASG00005001884	SNRNP200	100	86.478	Equus_asinus_asinus
ENSKMAG00000003665	snrnp200	99	89.766	ENSECAG00000019675	SNRNP200	100	89.766	Equus_caballus
ENSKMAG00000003665	snrnp200	91	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSKMAG00000003665	snrnp200	99	92.787	ENSELUG00000018948	snrnp200	100	92.724	Esox_lucius
ENSKMAG00000003665	snrnp200	99	89.813	ENSFCAG00000010699	SNRNP200	100	89.813	Felis_catus
ENSKMAG00000003665	snrnp200	93	86.607	ENSFALG00000001368	-	95	86.607	Ficedula_albicollis
ENSKMAG00000003665	snrnp200	99	87.354	ENSFDAG00000004683	SNRNP200	100	87.354	Fukomys_damarensis
ENSKMAG00000003665	snrnp200	100	96.844	ENSFHEG00000003786	snrnp200	100	96.844	Fundulus_heteroclitus
ENSKMAG00000003665	snrnp200	100	91.942	ENSGMOG00000004881	snrnp200	99	91.803	Gadus_morhua
ENSKMAG00000003665	snrnp200	100	96.987	ENSGAFG00000010807	snrnp200	100	96.987	Gambusia_affinis
ENSKMAG00000003665	snrnp200	100	93.762	ENSGACG00000011474	snrnp200	99	93.762	Gasterosteus_aculeatus
ENSKMAG00000003665	snrnp200	95	91.968	ENSGAGG00000016069	SNRNP200	98	98.387	Gopherus_agassizii
ENSKMAG00000003665	snrnp200	99	87.541	ENSGGOG00000005174	SNRNP200	97	91.964	Gorilla_gorilla
ENSKMAG00000003665	snrnp200	97	91.166	ENSHBUG00000011322	snrnp200	99	91.166	Haplochromis_burtoni
ENSKMAG00000003665	snrnp200	99	87.401	ENSHGLG00000006654	SNRNP200	100	87.401	Heterocephalus_glaber_female
ENSKMAG00000003665	snrnp200	99	87.401	ENSHGLG00100018594	SNRNP200	100	87.401	Heterocephalus_glaber_male
ENSKMAG00000003665	snrnp200	99	87.587	ENSSTOG00000016351	SNRNP200	100	87.587	Ictidomys_tridecemlineatus
ENSKMAG00000003665	snrnp200	99	87.448	ENSJJAG00000023659	Snrnp200	100	87.448	Jaculus_jaculus
ENSKMAG00000003665	snrnp200	100	94.540	ENSLBEG00000021585	snrnp200	100	94.540	Labrus_bergylta
ENSKMAG00000003665	snrnp200	81	88.527	ENSLACG00000000226	SNRNP200	100	88.527	Latimeria_chalumnae
ENSKMAG00000003665	snrnp200	100	91.142	ENSLOCG00000015198	snrnp200	100	91.142	Lepisosteus_oculatus
ENSKMAG00000003665	snrnp200	99	87.494	ENSLAFG00000015626	SNRNP200	100	87.494	Loxodonta_africana
ENSKMAG00000003665	snrnp200	99	87.494	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSKMAG00000003665	snrnp200	99	87.494	ENSMMUG00000023261	SNRNP200	100	87.494	Macaca_mulatta
ENSKMAG00000003665	snrnp200	99	87.448	ENSMNEG00000032398	SNRNP200	100	87.448	Macaca_nemestrina
ENSKMAG00000003665	snrnp200	99	87.541	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSKMAG00000003665	snrnp200	100	94.694	ENSMAMG00000007851	snrnp200	100	94.694	Mastacembelus_armatus
ENSKMAG00000003665	snrnp200	97	91.166	ENSMZEG00005010787	snrnp200	99	91.166	Maylandia_zebra
ENSKMAG00000003665	snrnp200	97	87.367	ENSMGAG00000001831	SNRNP200	99	87.361	Meleagris_gallopavo
ENSKMAG00000003665	snrnp200	99	87.587	ENSMAUG00000011825	Snrnp200	100	87.587	Mesocricetus_auratus
ENSKMAG00000003665	snrnp200	99	87.587	ENSMICG00000004710	SNRNP200	98	91.268	Microcebus_murinus
ENSKMAG00000003665	snrnp200	99	85.768	ENSMOCG00000011814	Snrnp200	100	85.768	Microtus_ochrogaster
ENSKMAG00000003665	snrnp200	99	92.455	ENSMMOG00000014167	snrnp200	100	92.394	Mola_mola
ENSKMAG00000003665	snrnp200	99	87.541	ENSMODG00000008475	SNRNP200	100	87.541	Monodelphis_domestica
ENSKMAG00000003665	snrnp200	100	94.307	ENSMALG00000001973	snrnp200	100	94.307	Monopterus_albus
ENSKMAG00000003665	snrnp200	99	87.448	MGP_CAROLIEiJ_G0024250	Snrnp200	100	87.448	Mus_caroli
ENSKMAG00000003665	snrnp200	99	87.494	ENSMUSG00000003660	Snrnp200	100	87.494	Mus_musculus
ENSKMAG00000003665	snrnp200	99	87.494	MGP_PahariEiJ_G0025695	Snrnp200	100	87.494	Mus_pahari
ENSKMAG00000003665	snrnp200	99	87.494	MGP_SPRETEiJ_G0025170	Snrnp200	100	91.436	Mus_spretus
ENSKMAG00000003665	snrnp200	99	87.634	ENSMPUG00000008949	SNRNP200	100	87.634	Mustela_putorius_furo
ENSKMAG00000003665	snrnp200	99	84.461	ENSMLUG00000027511	-	100	84.461	Myotis_lucifugus
ENSKMAG00000003665	snrnp200	99	87.232	ENSMLUG00000010493	SNRNP200	100	87.232	Myotis_lucifugus
ENSKMAG00000003665	snrnp200	99	87.541	ENSNGAG00000021993	Snrnp200	100	87.541	Nannospalax_galili
ENSKMAG00000003665	snrnp200	90	93.468	ENSNBRG00000017960	snrnp200	98	93.468	Neolamprologus_brichardi
ENSKMAG00000003665	snrnp200	99	83.272	ENSNLEG00000000025	SNRNP200	100	83.318	Nomascus_leucogenys
ENSKMAG00000003665	snrnp200	99	91.753	ENSMEUG00000010532	SNRNP200	79	89.524	Notamacropus_eugenii
ENSKMAG00000003665	snrnp200	96	86.282	ENSOPRG00000015464	SNRNP200	100	84.228	Ochotona_princeps
ENSKMAG00000003665	snrnp200	99	87.401	ENSODEG00000008366	SNRNP200	100	87.401	Octodon_degus
ENSKMAG00000003665	snrnp200	100	94.260	ENSONIG00000010714	snrnp200	100	94.260	Oreochromis_niloticus
ENSKMAG00000003665	snrnp200	99	87.494	ENSOCUG00000009864	SNRNP200	100	87.494	Oryctolagus_cuniculus
ENSKMAG00000003665	snrnp200	99	93.368	ENSORLG00000012286	snrnp200	100	93.368	Oryzias_latipes
ENSKMAG00000003665	snrnp200	99	93.508	ENSORLG00020004648	snrnp200	100	93.508	Oryzias_latipes_hni
ENSKMAG00000003665	snrnp200	99	93.508	ENSORLG00015019114	snrnp200	100	93.508	Oryzias_latipes_hsok
ENSKMAG00000003665	snrnp200	100	93.654	ENSOMEG00000011834	snrnp200	100	93.654	Oryzias_melastigma
ENSKMAG00000003665	snrnp200	99	87.587	ENSOGAG00000006879	SNRNP200	100	87.587	Otolemur_garnettii
ENSKMAG00000003665	snrnp200	99	86.707	ENSOARG00000013949	SNRNP200	100	86.707	Ovis_aries
ENSKMAG00000003665	snrnp200	99	87.541	ENSPPAG00000041559	SNRNP200	100	87.541	Pan_paniscus
ENSKMAG00000003665	snrnp200	99	87.634	ENSPPRG00000004435	SNRNP200	100	87.634	Panthera_pardus
ENSKMAG00000003665	snrnp200	99	87.214	ENSPTIG00000006380	SNRNP200	100	87.214	Panthera_tigris_altaica
ENSKMAG00000003665	snrnp200	99	87.541	ENSPTRG00000012230	SNRNP200	100	87.541	Pan_troglodytes
ENSKMAG00000003665	snrnp200	99	87.494	ENSPANG00000006017	SNRNP200	100	87.494	Papio_anubis
ENSKMAG00000003665	snrnp200	100	94.216	ENSPKIG00000014762	snrnp200	100	94.216	Paramormyrops_kingsleyae
ENSKMAG00000003665	snrnp200	99	86.754	ENSPSIG00000008580	SNRNP200	100	86.754	Pelodiscus_sinensis
ENSKMAG00000003665	snrnp200	99	87.494	ENSPCIG00000023050	SNRNP200	100	87.494	Phascolarctos_cinereus
ENSKMAG00000003665	snrnp200	100	94.683	ENSPFOG00000015110	snrnp200	100	94.683	Poecilia_formosa
ENSKMAG00000003665	snrnp200	97	94.466	ENSPLAG00000006711	snrnp200	99	94.466	Poecilia_latipinna
ENSKMAG00000003665	snrnp200	97	94.411	ENSPMEG00000021166	snrnp200	99	94.411	Poecilia_mexicana
ENSKMAG00000003665	snrnp200	100	97.035	ENSPREG00000008875	snrnp200	100	97.035	Poecilia_reticulata
ENSKMAG00000003665	snrnp200	99	87.541	ENSPPYG00000012068	SNRNP200	100	87.541	Pongo_abelii
ENSKMAG00000003665	snrnp200	96	94.231	ENSPCAG00000008536	SNRNP200	86	97.872	Procavia_capensis
ENSKMAG00000003665	snrnp200	99	87.541	ENSPCOG00000024608	SNRNP200	100	87.541	Propithecus_coquereli
ENSKMAG00000003665	snrnp200	95	90.481	ENSPVAG00000005860	SNRNP200	92	90.481	Pteropus_vampyrus
ENSKMAG00000003665	snrnp200	100	94.134	ENSPNYG00000017476	snrnp200	100	94.134	Pundamilia_nyererei
ENSKMAG00000003665	snrnp200	100	91.922	ENSPNAG00000010998	snrnp200	100	91.922	Pygocentrus_nattereri
ENSKMAG00000003665	snrnp200	99	87.587	ENSRNOG00000012157	Snrnp200	100	87.587	Rattus_norvegicus
ENSKMAG00000003665	snrnp200	99	87.541	ENSRBIG00000044690	-	100	87.541	Rhinopithecus_bieti
ENSKMAG00000003665	snrnp200	99	87.541	ENSRROG00000037952	-	100	87.541	Rhinopithecus_roxellana
ENSKMAG00000003665	snrnp200	99	87.541	ENSSBOG00000035471	SNRNP200	97	91.740	Saimiri_boliviensis_boliviensis
ENSKMAG00000003665	snrnp200	97	87.223	ENSSHAG00000000758	SNRNP200	99	87.215	Sarcophilus_harrisii
ENSKMAG00000003665	snrnp200	99	92.272	ENSSFOG00015018826	snrnp200	100	92.211	Scleropages_formosus
ENSKMAG00000003665	snrnp200	100	94.447	ENSSMAG00000005463	snrnp200	100	94.447	Scophthalmus_maximus
ENSKMAG00000003665	snrnp200	100	94.960	ENSSDUG00000021410	snrnp200	100	94.960	Seriola_dumerili
ENSKMAG00000003665	snrnp200	100	94.774	ENSSLDG00000010884	snrnp200	100	94.774	Seriola_lalandi_dorsalis
ENSKMAG00000003665	snrnp200	95	88.472	ENSSARG00000010728	SNRNP200	96	88.441	Sorex_araneus
ENSKMAG00000003665	snrnp200	99	87.961	ENSSPUG00000003726	-	100	87.961	Sphenodon_punctatus
ENSKMAG00000003665	snrnp200	100	94.914	ENSSPAG00000001842	snrnp200	100	94.914	Stegastes_partitus
ENSKMAG00000003665	snrnp200	99	87.681	ENSSSCG00000008127	SNRNP200	100	87.681	Sus_scrofa
ENSKMAG00000003665	snrnp200	99	78.963	ENSTGUG00000014475	-	100	78.963	Taeniopygia_guttata
ENSKMAG00000003665	snrnp200	100	93.654	ENSTRUG00000001307	snrnp200	100	93.654	Takifugu_rubripes
ENSKMAG00000003665	snrnp200	99	82.240	ENSTNIG00000004320	snrnp200	100	82.240	Tetraodon_nigroviridis
ENSKMAG00000003665	snrnp200	81	90.404	ENSTBEG00000003329	-	67	90.404	Tupaia_belangeri
ENSKMAG00000003665	snrnp200	99	87.401	ENSTTRG00000004983	SNRNP200	100	87.401	Tursiops_truncatus
ENSKMAG00000003665	snrnp200	74	78.488	ENSUAMG00000008395	-	95	78.488	Ursus_americanus
ENSKMAG00000003665	snrnp200	99	87.634	ENSUMAG00000012385	SNRNP200	100	87.634	Ursus_maritimus
ENSKMAG00000003665	snrnp200	87	92.857	ENSVPAG00000006434	SNRNP200	66	92.857	Vicugna_pacos
ENSKMAG00000003665	snrnp200	99	89.813	ENSVVUG00000026247	SNRNP200	100	89.813	Vulpes_vulpes
ENSKMAG00000003665	snrnp200	99	87.459	ENSXETG00000001243	snrnp200	100	87.459	Xenopus_tropicalis
ENSKMAG00000003665	snrnp200	97	94.608	ENSXMAG00000002058	snrnp200	98	94.608	Xiphophorus_maculatus