EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003777 (Gene tree)
Gene ID: 108229968
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 10202 bases
Position: chrLWHD01000001.1:5564391-5574592
Accession: 108229968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005047	ResIII	PF04851.15	1.3e-11	1	1
ENSKMAP00000005047	DEAD	PF00270.29	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005136	-	6331	XM_017405704	ENSKMAP00000005047	1035 (aa)	XP_017261193	UPI0007F89916

Gene Model

Click here to download ENSKMAG00000003777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003777	smarca5	51	41.013	ENSKMAG00000017279	hells	77	39.517
ENSKMAG00000003777	smarca5	52	31.615	ENSKMAG00000004744	rad54b	68	31.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003777	smarca5	95	82.929	ENSG00000102038	SMARCA1	92	83.742	Homo_sapiens
ENSKMAG00000003777	smarca5	100	97.104	ENSAPOG00000016035	smarca5	100	97.104	Acanthochromis_polyacanthus
ENSKMAG00000003777	smarca5	95	82.136	ENSAMEG00000015218	SMARCA1	92	82.828	Ailuropoda_melanoleuca
ENSKMAG00000003777	smarca5	87	97.558	ENSACIG00000016982	smarca5	100	97.558	Amphilophus_citrinellus
ENSKMAG00000003777	smarca5	100	97.104	ENSAOCG00000015578	smarca5	100	97.104	Amphiprion_ocellaris
ENSKMAG00000003777	smarca5	100	97.104	ENSAPEG00000011117	smarca5	99	98.109	Amphiprion_percula
ENSKMAG00000003777	smarca5	100	96.715	ENSATEG00000012894	smarca5	100	96.715	Anabas_testudineus
ENSKMAG00000003777	smarca5	95	83.707	ENSAPLG00000013149	SMARCA1	99	83.845	Anas_platyrhynchos
ENSKMAG00000003777	smarca5	95	84.093	ENSACAG00000011376	SMARCA1	93	84.560	Anolis_carolinensis
ENSKMAG00000003777	smarca5	95	78.283	ENSANAG00000023098	SMARCA1	92	79.039	Aotus_nancymaae
ENSKMAG00000003777	smarca5	100	96.815	ENSACLG00000025356	smarca5	100	96.815	Astatotilapia_calliptera
ENSKMAG00000003777	smarca5	100	90.778	ENSAMXG00000005709	smarca5	100	90.453	Astyanax_mexicanus
ENSKMAG00000003777	smarca5	90	84.533	ENSAMXG00000011227	smarca1	99	85.525	Astyanax_mexicanus
ENSKMAG00000003777	smarca5	95	83.588	ENSBTAG00000002292	SMARCA1	90	84.017	Bos_taurus
ENSKMAG00000003777	smarca5	97	62.426	WBGene00002169	isw-1	95	63.571	Caenorhabditis_elegans
ENSKMAG00000003777	smarca5	95	83.605	ENSCJAG00000002868	SMARCA1	92	83.742	Callithrix_jacchus
ENSKMAG00000003777	smarca5	95	73.784	ENSCAFG00000018673	SMARCA1	99	75.527	Canis_familiaris
ENSKMAG00000003777	smarca5	95	83.131	ENSCAFG00020001751	SMARCA1	92	83.845	Canis_lupus_dingo
ENSKMAG00000003777	smarca5	95	83.283	ENSCHIG00000009837	SMARCA1	92	83.742	Capra_hircus
ENSKMAG00000003777	smarca5	98	80.212	ENSTSYG00000004240	SMARCA1	94	84.730	Carlito_syrichta
ENSKMAG00000003777	smarca5	95	81.627	ENSCPOG00000013601	SMARCA1	93	82.317	Cavia_porcellus
ENSKMAG00000003777	smarca5	95	80.202	ENSCCAG00000030817	SMARCA1	92	80.982	Cebus_capucinus
ENSKMAG00000003777	smarca5	93	84.058	ENSCATG00000015921	SMARCA1	90	84.984	Cercocebus_atys
ENSKMAG00000003777	smarca5	95	82.222	ENSCLAG00000002171	SMARCA1	92	82.924	Chinchilla_lanigera
ENSKMAG00000003777	smarca5	95	82.929	ENSCSAG00000008460	SMARCA1	92	83.742	Chlorocebus_sabaeus
ENSKMAG00000003777	smarca5	95	83.688	ENSCPBG00000001146	SMARCA1	92	84.151	Chrysemys_picta_bellii
ENSKMAG00000003777	smarca5	96	73.857	ENSCING00000004110	swi/snf	99	73.857	Ciona_intestinalis
ENSKMAG00000003777	smarca5	96	73.161	ENSCSAVG00000004620	-	99	75.951	Ciona_savignyi
ENSKMAG00000003777	smarca5	95	83.030	ENSCANG00000007183	SMARCA1	92	83.845	Colobus_angolensis_palliatus
ENSKMAG00000003777	smarca5	95	82.020	ENSCGRG00001010776	Smarca1	92	82.720	Cricetulus_griseus_chok1gshd
ENSKMAG00000003777	smarca5	95	81.560	ENSCGRG00000015301	Smarca1	94	83.263	Cricetulus_griseus_crigri
ENSKMAG00000003777	smarca5	100	95.942	ENSCSEG00000000328	smarca5	100	96.039	Cynoglossus_semilaevis
ENSKMAG00000003777	smarca5	100	97.488	ENSCVAG00000008668	smarca5	100	97.488	Cyprinodon_variegatus
ENSKMAG00000003777	smarca5	100	91.137	ENSDARG00000052348	smarca5	100	90.541	Danio_rerio
ENSKMAG00000003777	smarca5	94	82.683	ENSDARG00000012776	smarca1	96	82.849	Danio_rerio
ENSKMAG00000003777	smarca5	95	82.790	ENSDNOG00000004315	SMARCA1	91	84.665	Dasypus_novemcinctus
ENSKMAG00000003777	smarca5	97	81.555	ENSDORG00000009270	Smarca1	90	84.878	Dipodomys_ordii
ENSKMAG00000003777	smarca5	95	74.372	FBgn0011604	Iswi	98	72.603	Drosophila_melanogaster
ENSKMAG00000003777	smarca5	78	80.357	ENSETEG00000017426	SMARCA1	83	80.357	Echinops_telfairi
ENSKMAG00000003777	smarca5	97	81.033	ENSEBUG00000001239	smarca5	96	82.939	Eptatretus_burgeri
ENSKMAG00000003777	smarca5	95	79.150	ENSEASG00005008218	SMARCA1	99	79.675	Equus_asinus_asinus
ENSKMAG00000003777	smarca5	95	83.030	ENSECAG00000012106	SMARCA1	92	83.742	Equus_caballus
ENSKMAG00000003777	smarca5	77	85.099	ENSEEUG00000014927	SMARCA1	80	85.099	Erinaceus_europaeus
ENSKMAG00000003777	smarca5	94	83.861	ENSELUG00000010515	smarca1	95	85.059	Esox_lucius
ENSKMAG00000003777	smarca5	95	83.030	ENSFCAG00000018496	SMARCA1	92	83.742	Felis_catus
ENSKMAG00000003777	smarca5	88	84.792	ENSFALG00000000209	SMARCA1	98	84.792	Ficedula_albicollis
ENSKMAG00000003777	smarca5	93	82.515	ENSFDAG00000009818	SMARCA1	93	83.281	Fukomys_damarensis
ENSKMAG00000003777	smarca5	100	95.985	ENSFHEG00000007687	smarca5	100	95.985	Fundulus_heteroclitus
ENSKMAG00000003777	smarca5	96	81.467	ENSGALG00000008431	SMARCA1	95	84.744	Gallus_gallus
ENSKMAG00000003777	smarca5	100	98.068	ENSGAFG00000017731	smarca5	100	98.068	Gambusia_affinis
ENSKMAG00000003777	smarca5	94	84.156	ENSGAGG00000023575	SMARCA1	99	84.156	Gopherus_agassizii
ENSKMAG00000003777	smarca5	70	96.000	ENSGGOG00000012841	-	91	80.029	Gorilla_gorilla
ENSKMAG00000003777	smarca5	95	82.121	ENSHGLG00000003080	SMARCA1	92	82.822	Heterocephalus_glaber_female
ENSKMAG00000003777	smarca5	95	81.627	ENSHGLG00100001102	SMARCA1	98	82.317	Heterocephalus_glaber_male
ENSKMAG00000003777	smarca5	100	96.429	ENSHCOG00000005458	smarca5	100	96.429	Hippocampus_comes
ENSKMAG00000003777	smarca5	94	84.521	ENSIPUG00000016905	Smarca1	99	84.631	Ictalurus_punctatus
ENSKMAG00000003777	smarca5	100	90.164	ENSIPUG00000005229	SMARCA5	99	91.782	Ictalurus_punctatus
ENSKMAG00000003777	smarca5	95	82.929	ENSSTOG00000014524	SMARCA1	95	83.316	Ictidomys_tridecemlineatus
ENSKMAG00000003777	smarca5	95	81.608	ENSJJAG00000002593	Smarca1	93	82.299	Jaculus_jaculus
ENSKMAG00000003777	smarca5	94	95.803	ENSLBEG00000013295	SMARCA1	100	97.342	Labrus_bergylta
ENSKMAG00000003777	smarca5	100	95.845	ENSLBEG00000018112	smarca5	100	95.556	Labrus_bergylta
ENSKMAG00000003777	smarca5	95	84.506	ENSLACG00000016697	SMARCA1	95	85.258	Latimeria_chalumnae
ENSKMAG00000003777	smarca5	94	86.080	ENSLOCG00000014591	smarca1	95	86.080	Lepisosteus_oculatus
ENSKMAG00000003777	smarca5	95	81.827	ENSLAFG00000000896	SMARCA1	98	82.520	Loxodonta_africana
ENSKMAG00000003777	smarca5	95	82.929	ENSMFAG00000002117	SMARCA1	93	84.803	Macaca_fascicularis
ENSKMAG00000003777	smarca5	93	84.058	ENSMMUG00000008818	SMARCA1	97	84.771	Macaca_mulatta
ENSKMAG00000003777	smarca5	93	84.058	ENSMNEG00000041768	SMARCA1	93	84.803	Macaca_nemestrina
ENSKMAG00000003777	smarca5	95	82.929	ENSMLEG00000043198	SMARCA1	92	83.742	Mandrillus_leucophaeus
ENSKMAG00000003777	smarca5	100	96.824	ENSMAMG00000014294	smarca5	100	96.824	Mastacembelus_armatus
ENSKMAG00000003777	smarca5	100	96.815	ENSMZEG00005009369	smarca5	100	96.815	Maylandia_zebra
ENSKMAG00000003777	smarca5	95	82.596	ENSMGAG00000007042	SMARCA1	97	82.727	Meleagris_gallopavo
ENSKMAG00000003777	smarca5	93	82.595	ENSMAUG00000008133	Smarca1	90	83.369	Mesocricetus_auratus
ENSKMAG00000003777	smarca5	95	83.333	ENSMICG00000015768	SMARCA1	92	84.049	Microcebus_murinus
ENSKMAG00000003777	smarca5	95	81.206	ENSMOCG00000009464	Smarca1	92	81.892	Microtus_ochrogaster
ENSKMAG00000003777	smarca5	96	95.569	ENSMMOG00000005547	smarca5	100	95.569	Mola_mola
ENSKMAG00000003777	smarca5	99	80.564	ENSMODG00000013187	-	94	84.000	Monodelphis_domestica
ENSKMAG00000003777	smarca5	100	96.528	ENSMALG00000002081	smarca5	100	96.528	Monopterus_albus
ENSKMAG00000003777	smarca5	95	81.709	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.503	Mus_caroli
ENSKMAG00000003777	smarca5	95	81.809	ENSMUSG00000031099	Smarca1	92	82.503	Mus_musculus
ENSKMAG00000003777	smarca5	95	81.984	MGP_PahariEiJ_G0031579	Smarca1	92	82.787	Mus_pahari
ENSKMAG00000003777	smarca5	95	81.809	MGP_SPRETEiJ_G0034192	Smarca1	92	82.503	Mus_spretus
ENSKMAG00000003777	smarca5	95	82.136	ENSMPUG00000017423	SMARCA1	87	82.828	Mustela_putorius_furo
ENSKMAG00000003777	smarca5	95	80.876	ENSMLUG00000029614	SMARCA1	93	81.250	Myotis_lucifugus
ENSKMAG00000003777	smarca5	93	82.904	ENSNGAG00000006492	Smarca1	90	83.686	Nannospalax_galili
ENSKMAG00000003777	smarca5	96	97.487	ENSNBRG00000004463	smarca5	100	97.487	Neolamprologus_brichardi
ENSKMAG00000003777	smarca5	95	81.238	ENSNLEG00000015179	SMARCA1	94	84.076	Nomascus_leucogenys
ENSKMAG00000003777	smarca5	89	75.936	ENSMEUG00000008819	SMARCA1	97	76.211	Notamacropus_eugenii
ENSKMAG00000003777	smarca5	96	80.417	ENSODEG00000012163	SMARCA1	90	83.070	Octodon_degus
ENSKMAG00000003777	smarca5	100	96.911	ENSONIG00000009993	smarca5	100	96.911	Oreochromis_niloticus
ENSKMAG00000003777	smarca5	94	84.568	ENSOANG00000002862	SMARCA1	99	84.568	Ornithorhynchus_anatinus
ENSKMAG00000003777	smarca5	95	83.181	ENSOCUG00000001047	SMARCA1	92	83.640	Oryctolagus_cuniculus
ENSKMAG00000003777	smarca5	100	96.728	ENSORLG00000021998	smarca5	100	96.728	Oryzias_latipes
ENSKMAG00000003777	smarca5	100	96.724	ENSORLG00020017679	smarca5	100	96.724	Oryzias_latipes_hni
ENSKMAG00000003777	smarca5	100	96.914	ENSORLG00015017210	smarca5	100	96.914	Oryzias_latipes_hsok
ENSKMAG00000003777	smarca5	100	97.008	ENSOMEG00000000086	smarca5	100	97.008	Oryzias_melastigma
ENSKMAG00000003777	smarca5	93	83.573	ENSOGAG00000004399	SMARCA1	90	84.122	Otolemur_garnettii
ENSKMAG00000003777	smarca5	94	83.742	ENSOARG00000014638	SMARCA1	99	83.742	Ovis_aries
ENSKMAG00000003777	smarca5	95	82.929	ENSPPAG00000034647	SMARCA1	92	83.742	Pan_paniscus
ENSKMAG00000003777	smarca5	95	83.131	ENSPPRG00000008929	SMARCA1	92	83.845	Panthera_pardus
ENSKMAG00000003777	smarca5	95	81.231	ENSPTIG00000000915	SMARCA1	96	81.910	Panthera_tigris_altaica
ENSKMAG00000003777	smarca5	95	82.929	ENSPTRG00000049876	SMARCA1	90	84.984	Pan_troglodytes
ENSKMAG00000003777	smarca5	95	82.929	ENSPANG00000003871	SMARCA1	92	83.742	Papio_anubis
ENSKMAG00000003777	smarca5	94	82.395	ENSPKIG00000013411	smarca1	96	84.122	Paramormyrops_kingsleyae
ENSKMAG00000003777	smarca5	94	84.156	ENSPSIG00000010101	SMARCA1	99	84.156	Pelodiscus_sinensis
ENSKMAG00000003777	smarca5	93	82.904	ENSPEMG00000017503	Smarca1	90	83.686	Peromyscus_maniculatus_bairdii
ENSKMAG00000003777	smarca5	95	84.114	ENSPCIG00000015460	SMARCA1	96	84.426	Phascolarctos_cinereus
ENSKMAG00000003777	smarca5	100	98.164	ENSPFOG00000007649	smarca5	100	98.164	Poecilia_formosa
ENSKMAG00000003777	smarca5	100	98.164	ENSPLAG00000003363	smarca5	100	98.164	Poecilia_latipinna
ENSKMAG00000003777	smarca5	100	98.068	ENSPMEG00000019849	smarca5	100	98.068	Poecilia_mexicana
ENSKMAG00000003777	smarca5	100	97.971	ENSPREG00000023250	smarca5	100	97.971	Poecilia_reticulata
ENSKMAG00000003777	smarca5	95	80.101	ENSPPYG00000020703	SMARCA1	92	80.879	Pongo_abelii
ENSKMAG00000003777	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.119	Propithecus_coquereli
ENSKMAG00000003777	smarca5	87	83.355	ENSPVAG00000003805	SMARCA1	84	83.443	Pteropus_vampyrus
ENSKMAG00000003777	smarca5	58	98.158	ENSPNYG00000012299	smarca5	93	98.158	Pundamilia_nyererei
ENSKMAG00000003777	smarca5	95	81.919	ENSRNOG00000003762	Smarca1	92	82.618	Rattus_norvegicus
ENSKMAG00000003777	smarca5	95	83.030	ENSRROG00000034167	SMARCA1	92	83.845	Rhinopithecus_roxellana
ENSKMAG00000003777	smarca5	94	83.640	ENSSBOG00000020641	SMARCA1	99	83.640	Saimiri_boliviensis_boliviensis
ENSKMAG00000003777	smarca5	94	79.321	ENSSHAG00000013518	SMARCA1	99	79.321	Sarcophilus_harrisii
ENSKMAG00000003777	smarca5	95	92.653	ENSSFOG00015016794	smarca5	100	92.784	Scleropages_formosus
ENSKMAG00000003777	smarca5	95	84.756	ENSSFOG00015009043	smarca1	96	85.246	Scleropages_formosus
ENSKMAG00000003777	smarca5	100	95.661	ENSSMAG00000004801	smarca5	100	95.564	Scophthalmus_maximus
ENSKMAG00000003777	smarca5	100	96.812	ENSSDUG00000020690	smarca5	100	96.812	Seriola_dumerili
ENSKMAG00000003777	smarca5	100	96.812	ENSSLDG00000025190	smarca5	100	96.812	Seriola_lalandi_dorsalis
ENSKMAG00000003777	smarca5	78	85.409	ENSSARG00000000842	SMARCA1	81	85.409	Sorex_araneus
ENSKMAG00000003777	smarca5	93	84.369	ENSSPUG00000000590	SMARCA1	93	84.848	Sphenodon_punctatus
ENSKMAG00000003777	smarca5	100	96.815	ENSSPAG00000002894	smarca5	100	96.815	Stegastes_partitus
ENSKMAG00000003777	smarca5	93	84.058	ENSSSCG00000012649	SMARCA1	95	83.419	Sus_scrofa
ENSKMAG00000003777	smarca5	95	83.401	ENSTGUG00000003899	-	99	83.538	Taeniopygia_guttata
ENSKMAG00000003777	smarca5	100	95.362	ENSTRUG00000014094	smarca5	100	95.362	Takifugu_rubripes
ENSKMAG00000003777	smarca5	98	94.685	ENSTNIG00000017717	smarca5	97	95.050	Tetraodon_nigroviridis
ENSKMAG00000003777	smarca5	86	82.705	ENSTBEG00000014973	SMARCA1	89	82.751	Tupaia_belangeri
ENSKMAG00000003777	smarca5	93	79.980	ENSTTRG00000006168	SMARCA1	96	80.757	Tursiops_truncatus
ENSKMAG00000003777	smarca5	95	83.131	ENSUAMG00000020201	SMARCA1	92	83.845	Ursus_americanus
ENSKMAG00000003777	smarca5	97	78.685	ENSUMAG00000004073	SMARCA1	95	85.926	Ursus_maritimus
ENSKMAG00000003777	smarca5	73	87.500	ENSVPAG00000010492	-	77	87.889	Vicugna_pacos
ENSKMAG00000003777	smarca5	95	83.131	ENSVVUG00000008878	SMARCA1	98	85.091	Vulpes_vulpes
ENSKMAG00000003777	smarca5	95	83.723	ENSXETG00000001526	smarca1	98	84.189	Xenopus_tropicalis
ENSKMAG00000003777	smarca5	97	98.016	ENSXCOG00000011170	smarca5	100	98.016	Xiphophorus_couchianus
ENSKMAG00000003777	smarca5	100	98.068	ENSXMAG00000009678	smarca5	100	98.068	Xiphophorus_maculatus