EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000003882 (Gene tree)
Gene ID: 108233062
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 25858 bases
Position: chrLWHD01000019.1:1560810-1586667
Accession: 108233062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005105	RRM_5	PF13893.6	2.3e-08	1	2
ENSKMAP00000005105	RRM_5	PF13893.6	2.3e-08	2	2
ENSKMAP00000005105	RRM_1	PF00076.22	7.8e-40	1	3
ENSKMAP00000005105	RRM_1	PF00076.22	7.8e-40	2	3
ENSKMAP00000005105	RRM_1	PF00076.22	7.8e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005195	-	13271	XM_017411241	ENSKMAP00000005105	3545 (aa)	XP_017266730	-

Gene Model

Click here to download ENSKMAG00000003882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003882	-	89	48.272	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSKMAG00000003882	-	70	81.564	ENSAPOG00000011411	si:ch1073-335m2.2	99	81.564	Acanthochromis_polyacanthus
ENSKMAG00000003882	-	100	81.629	ENSAPOG00000009853	-	87	96.067	Acanthochromis_polyacanthus
ENSKMAG00000003882	-	69	56.000	ENSAMEG00000011817	SPEN	96	79.775	Ailuropoda_melanoleuca
ENSKMAG00000003882	-	83	74.825	ENSAOCG00000008077	si:ch1073-335m2.2	99	74.825	Amphiprion_ocellaris
ENSKMAG00000003882	-	100	81.517	ENSAOCG00000014505	-	100	81.433	Amphiprion_ocellaris
ENSKMAG00000003882	-	100	81.517	ENSAPEG00000010288	-	100	81.433	Amphiprion_percula
ENSKMAG00000003882	-	95	81.564	ENSAPEG00000013515	si:ch1073-335m2.2	99	81.564	Amphiprion_percula
ENSKMAG00000003882	-	94	79.348	ENSATEG00000007674	si:ch1073-335m2.2	77	79.348	Anabas_testudineus
ENSKMAG00000003882	-	100	78.095	ENSATEG00000005627	-	100	78.067	Anabas_testudineus
ENSKMAG00000003882	-	92	55.962	ENSAPLG00000012618	SPEN	99	77.483	Anas_platyrhynchos
ENSKMAG00000003882	-	90	47.462	ENSANAG00000034428	SPEN	96	77.124	Aotus_nancymaae
ENSKMAG00000003882	-	92	84.615	ENSACLG00000021433	si:ch1073-335m2.2	98	84.615	Astatotilapia_calliptera
ENSKMAG00000003882	-	100	78.018	ENSACLG00000016922	-	100	77.962	Astatotilapia_calliptera
ENSKMAG00000003882	-	100	54.180	ENSAMXG00000012485	spen	100	53.988	Astyanax_mexicanus
ENSKMAG00000003882	-	69	55.962	ENSBTAG00000018729	SPEN	69	79.775	Bos_taurus
ENSKMAG00000003882	-	89	49.140	ENSCJAG00000008527	SPEN	87	80.899	Callithrix_jacchus
ENSKMAG00000003882	-	87	51.349	ENSCAFG00000016132	-	92	80.899	Canis_familiaris
ENSKMAG00000003882	-	59	54.724	ENSTSYG00000036016	SPEN	65	54.288	Carlito_syrichta
ENSKMAG00000003882	-	72	54.311	ENSCAPG00000013803	SPEN	97	44.227	Cavia_aperea
ENSKMAG00000003882	-	68	54.513	ENSCPOG00000014036	SPEN	96	44.339	Cavia_porcellus
ENSKMAG00000003882	-	91	42.070	ENSCCAG00000020258	SPEN	85	80.899	Cebus_capucinus
ENSKMAG00000003882	-	83	85.926	ENSCATG00000015079	SPEN	96	81.081	Cercocebus_atys
ENSKMAG00000003882	-	68	54.354	ENSCLAG00000002018	SPEN	89	46.604	Chinchilla_lanigera
ENSKMAG00000003882	-	89	46.903	ENSCANG00000034547	SPEN	89	71.512	Colobus_angolensis_palliatus
ENSKMAG00000003882	-	91	46.558	ENSCGRG00001007725	Spen	97	81.461	Cricetulus_griseus_chok1gshd
ENSKMAG00000003882	-	91	45.235	ENSCGRG00000010581	Spen	97	78.000	Cricetulus_griseus_crigri
ENSKMAG00000003882	-	99	74.576	ENSCSEG00000003915	-	100	74.589	Cynoglossus_semilaevis
ENSKMAG00000003882	-	71	71.831	ENSCVAG00000009075	si:ch1073-335m2.2	100	71.831	Cyprinodon_variegatus
ENSKMAG00000003882	-	100	78.228	ENSCVAG00000016346	-	100	78.087	Cyprinodon_variegatus
ENSKMAG00000003882	-	100	52.714	ENSDARG00000074245	spen	100	90.370	Danio_rerio
ENSKMAG00000003882	-	96	68.807	ENSDARG00000074332	si:ch1073-335m2.2	100	68.807	Danio_rerio
ENSKMAG00000003882	-	89	48.811	ENSDNOG00000041948	SPEN	87	80.899	Dasypus_novemcinctus
ENSKMAG00000003882	-	89	45.235	ENSDORG00000023909	Spen	97	76.552	Dipodomys_ordii
ENSKMAG00000003882	-	52	60.209	ENSETEG00000016692	-	55	77.333	Echinops_telfairi
ENSKMAG00000003882	-	94	85.294	ENSEASG00005015911	SPEN	96	80.899	Equus_asinus_asinus
ENSKMAG00000003882	-	94	85.294	ENSECAG00000008833	SPEN	96	80.899	Equus_caballus
ENSKMAG00000003882	-	56	88.372	ENSEEUG00000010255	SPEN	59	88.372	Erinaceus_europaeus
ENSKMAG00000003882	-	85	83.333	ENSELUG00000007726	si:ch1073-335m2.2	99	83.333	Esox_lucius
ENSKMAG00000003882	-	90	84.884	ENSFDAG00000010212	SPEN	96	43.412	Fukomys_damarensis
ENSKMAG00000003882	-	98	73.810	ENSFHEG00000004544	si:ch1073-335m2.2	99	79.651	Fundulus_heteroclitus
ENSKMAG00000003882	-	94	75.897	ENSGMOG00000008156	si:ch1073-335m2.2	97	76.684	Gadus_morhua
ENSKMAG00000003882	-	97	86.957	ENSGMOG00000008397	-	98	88.827	Gadus_morhua
ENSKMAG00000003882	-	100	79.961	ENSGAFG00000015819	-	88	94.944	Gambusia_affinis
ENSKMAG00000003882	-	97	66.667	ENSGAFG00000021570	si:ch1073-335m2.2	99	79.070	Gambusia_affinis
ENSKMAG00000003882	-	100	72.704	ENSGACG00000005341	-	100	72.508	Gasterosteus_aculeatus
ENSKMAG00000003882	-	97	80.233	ENSGACG00000001176	si:ch1073-335m2.2	70	80.233	Gasterosteus_aculeatus
ENSKMAG00000003882	-	100	47.560	ENSGAGG00000020785	SPEN	99	80.899	Gopherus_agassizii
ENSKMAG00000003882	-	89	48.272	ENSGGOG00000012041	SPEN	85	80.899	Gorilla_gorilla
ENSKMAG00000003882	-	93	79.651	ENSHBUG00000023253	si:ch1073-335m2.2	99	79.651	Haplochromis_burtoni
ENSKMAG00000003882	-	100	77.990	ENSHBUG00000020626	-	100	77.962	Haplochromis_burtoni
ENSKMAG00000003882	-	81	55.195	ENSHGLG00000019259	SPEN	78	54.959	Heterocephalus_glaber_female
ENSKMAG00000003882	-	68	54.195	ENSHGLG00100019294	SPEN	76	53.950	Heterocephalus_glaber_male
ENSKMAG00000003882	-	93	82.540	ENSHCOG00000006004	si:ch1073-335m2.2	99	82.540	Hippocampus_comes
ENSKMAG00000003882	-	95	59.684	ENSIPUG00000018212	si:ch1073-335m2.2	99	59.684	Ictalurus_punctatus
ENSKMAG00000003882	-	100	52.132	ENSIPUG00000021668	spen	100	52.482	Ictalurus_punctatus
ENSKMAG00000003882	-	68	54.109	ENSSTOG00000021428	SPEN	69	76.552	Ictidomys_tridecemlineatus
ENSKMAG00000003882	-	69	55.818	ENSJJAG00000010882	Spen	98	81.461	Jaculus_jaculus
ENSKMAG00000003882	-	97	82.840	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.840	Labrus_bergylta
ENSKMAG00000003882	-	84	72.685	ENSLBEG00000019129	-	100	72.453	Labrus_bergylta
ENSKMAG00000003882	-	97	84.302	ENSLACG00000003258	SPEN	99	81.461	Latimeria_chalumnae
ENSKMAG00000003882	-	96	83.448	ENSLOCG00000007896	si:ch1073-335m2.2	98	83.448	Lepisosteus_oculatus
ENSKMAG00000003882	-	98	44.460	ENSLAFG00000004524	SPEN	96	77.124	Loxodonta_africana
ENSKMAG00000003882	-	88	66.270	ENSMFAG00000041974	SPEN	96	80.899	Macaca_fascicularis
ENSKMAG00000003882	-	88	66.270	ENSMMUG00000008026	SPEN	96	80.899	Macaca_mulatta
ENSKMAG00000003882	-	88	66.270	ENSMNEG00000042402	SPEN	85	80.899	Macaca_nemestrina
ENSKMAG00000003882	-	89	47.869	ENSMLEG00000039293	SPEN	96	69.663	Mandrillus_leucophaeus
ENSKMAG00000003882	-	97	85.030	ENSMAMG00000023870	si:ch1073-335m2.2	99	85.030	Mastacembelus_armatus
ENSKMAG00000003882	-	89	76.101	ENSMZEG00005021491	-	99	76.069	Maylandia_zebra
ENSKMAG00000003882	-	92	84.615	ENSMZEG00005011762	si:ch1073-335m2.2	98	84.615	Maylandia_zebra
ENSKMAG00000003882	-	73	55.251	ENSMAUG00000008318	Spen	96	80.899	Mesocricetus_auratus
ENSKMAG00000003882	-	69	55.693	ENSMICG00000030994	SPEN	96	80.337	Microcebus_murinus
ENSKMAG00000003882	-	89	47.148	ENSMOCG00000016083	Spen	86	80.899	Microtus_ochrogaster
ENSKMAG00000003882	-	74	83.432	ENSMMOG00000021742	si:ch1073-335m2.2	98	83.432	Mola_mola
ENSKMAG00000003882	-	100	45.012	ENSMODG00000003411	SPEN	99	80.899	Monodelphis_domestica
ENSKMAG00000003882	-	100	78.232	ENSMALG00000008625	-	100	78.176	Monopterus_albus
ENSKMAG00000003882	-	69	55.773	MGP_CAROLIEiJ_G0026745	Spen	97	80.337	Mus_caroli
ENSKMAG00000003882	-	69	56.062	ENSMUSG00000040761	Spen	97	80.337	Mus_musculus
ENSKMAG00000003882	-	69	54.852	MGP_PahariEiJ_G0029076	Spen	97	80.337	Mus_pahari
ENSKMAG00000003882	-	89	47.914	MGP_SPRETEiJ_G0027724	Spen	97	80.337	Mus_spretus
ENSKMAG00000003882	-	64	80.874	ENSMPUG00000016317	SPEN	67	71.818	Mustela_putorius_furo
ENSKMAG00000003882	-	63	88.172	ENSMLUG00000010144	SPEN	98	78.689	Myotis_lucifugus
ENSKMAG00000003882	-	89	65.385	ENSNGAG00000000641	Spen	97	80.899	Nannospalax_galili
ENSKMAG00000003882	-	85	75.595	ENSNBRG00000022090	-	100	75.562	Neolamprologus_brichardi
ENSKMAG00000003882	-	92	84.615	ENSNBRG00000005733	si:ch1073-335m2.2	98	84.615	Neolamprologus_brichardi
ENSKMAG00000003882	-	88	47.436	ENSNLEG00000007652	SPEN	85	77.124	Nomascus_leucogenys
ENSKMAG00000003882	-	76	83.333	ENSMEUG00000002422	SPEN	89	83.333	Notamacropus_eugenii
ENSKMAG00000003882	-	66	63.822	ENSOPRG00000015800	SPEN	81	78.000	Ochotona_princeps
ENSKMAG00000003882	-	94	46.333	ENSODEG00000016644	SPEN	94	45.892	Octodon_degus
ENSKMAG00000003882	-	100	76.388	ENSONIG00000006573	-	99	87.081	Oreochromis_niloticus
ENSKMAG00000003882	-	69	51.501	ENSOCUG00000010840	SPEN	69	62.353	Oryctolagus_cuniculus
ENSKMAG00000003882	-	90	67.797	ENSORLG00000018414	si:ch1073-335m2.2	100	67.797	Oryzias_latipes
ENSKMAG00000003882	-	87	65.590	ENSORLG00000028894	-	100	65.430	Oryzias_latipes
ENSKMAG00000003882	-	97	67.797	ENSORLG00020009351	si:ch1073-335m2.2	100	67.797	Oryzias_latipes_hni
ENSKMAG00000003882	-	87	65.992	ENSORLG00020007735	-	100	65.799	Oryzias_latipes_hni
ENSKMAG00000003882	-	100	67.969	ENSORLG00015022085	-	100	67.828	Oryzias_latipes_hsok
ENSKMAG00000003882	-	95	83.333	ENSORLG00015005537	si:ch1073-335m2.2	99	83.333	Oryzias_latipes_hsok
ENSKMAG00000003882	-	100	68.522	ENSOMEG00000007639	-	100	68.212	Oryzias_melastigma
ENSKMAG00000003882	-	50	84.049	ENSOMEG00000004509	si:ch1073-335m2.2	52	84.049	Oryzias_melastigma
ENSKMAG00000003882	-	88	47.581	ENSPPAG00000035690	SPEN	85	77.333	Pan_paniscus
ENSKMAG00000003882	-	89	48.186	ENSPTRG00000000210	SPEN	85	80.899	Pan_troglodytes
ENSKMAG00000003882	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSKMAG00000003882	-	100	52.296	ENSPKIG00000002617	SPEN	90	83.978	Paramormyrops_kingsleyae
ENSKMAG00000003882	-	92	53.278	ENSPSIG00000008026	SPEN	99	77.483	Pelodiscus_sinensis
ENSKMAG00000003882	-	98	74.627	ENSPFOG00000017986	si:ch1073-335m2.2	99	79.070	Poecilia_formosa
ENSKMAG00000003882	-	98	74.627	ENSPLAG00000016625	si:ch1073-335m2.2	99	79.070	Poecilia_latipinna
ENSKMAG00000003882	-	98	74.627	ENSPMEG00000002674	si:ch1073-335m2.2	99	79.070	Poecilia_mexicana
ENSKMAG00000003882	-	100	79.932	ENSPMEG00000006764	-	88	94.382	Poecilia_mexicana
ENSKMAG00000003882	-	96	74.627	ENSPREG00000005357	si:ch1073-335m2.2	99	79.070	Poecilia_reticulata
ENSKMAG00000003882	-	100	79.966	ENSPREG00000010399	-	88	94.382	Poecilia_reticulata
ENSKMAG00000003882	-	89	48.253	ENSPPYG00000001834	SPEN	85	80.899	Pongo_abelii
ENSKMAG00000003882	-	88	65.476	ENSPCAG00000009543	SPEN	88	69.388	Procavia_capensis
ENSKMAG00000003882	-	90	46.393	ENSPCOG00000021735	SPEN	86	80.337	Propithecus_coquereli
ENSKMAG00000003882	-	70	64.542	ENSPVAG00000013794	SPEN	68	80.337	Pteropus_vampyrus
ENSKMAG00000003882	-	100	77.990	ENSPNYG00000012379	-	100	77.962	Pundamilia_nyererei
ENSKMAG00000003882	-	92	84.615	ENSPNYG00000009042	si:ch1073-335m2.2	98	84.615	Pundamilia_nyererei
ENSKMAG00000003882	-	97	80.337	ENSPNAG00000011452	si:ch1073-335m2.2	99	80.337	Pygocentrus_nattereri
ENSKMAG00000003882	-	100	55.054	ENSPNAG00000020795	spen	87	69.329	Pygocentrus_nattereri
ENSKMAG00000003882	-	68	55.144	ENSRNOG00000033556	Spen	97	77.483	Rattus_norvegicus
ENSKMAG00000003882	-	88	47.645	ENSSBOG00000028770	SPEN	85	77.124	Saimiri_boliviensis_boliviensis
ENSKMAG00000003882	-	93	47.508	ENSSHAG00000004960	SPEN	98	77.961	Sarcophilus_harrisii
ENSKMAG00000003882	-	86	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	100	53.789	Scleropages_formosus
ENSKMAG00000003882	-	100	53.766	ENSSFOG00015010267	si:ch1073-335m2.2	100	53.421	Scleropages_formosus
ENSKMAG00000003882	-	100	77.572	ENSSMAG00000008996	-	100	77.376	Scophthalmus_maximus
ENSKMAG00000003882	-	71	75.897	ENSSMAG00000000125	si:ch1073-335m2.2	99	75.897	Scophthalmus_maximus
ENSKMAG00000003882	-	94	84.615	ENSSDUG00000008416	si:ch1073-335m2.2	99	84.615	Seriola_dumerili
ENSKMAG00000003882	-	100	80.623	ENSSDUG00000003476	-	97	96.111	Seriola_dumerili
ENSKMAG00000003882	-	100	80.538	ENSSLDG00000012950	-	97	96.111	Seriola_lalandi_dorsalis
ENSKMAG00000003882	-	80	46.489	ENSSPUG00000001866	-	100	42.785	Sphenodon_punctatus
ENSKMAG00000003882	-	98	82.123	ENSSPAG00000012454	si:ch1073-335m2.2	100	82.123	Stegastes_partitus
ENSKMAG00000003882	-	100	82.500	ENSSPAG00000006014	-	88	94.944	Stegastes_partitus
ENSKMAG00000003882	-	86	45.297	ENSSSCG00000034484	SPEN	85	80.899	Sus_scrofa
ENSKMAG00000003882	-	100	72.534	ENSTRUG00000024350	-	100	72.450	Takifugu_rubripes
ENSKMAG00000003882	-	86	62.992	ENSTRUG00000021008	si:ch1073-335m2.2	100	62.992	Takifugu_rubripes
ENSKMAG00000003882	-	97	85.327	ENSTNIG00000010907	-	100	85.327	Tetraodon_nigroviridis
ENSKMAG00000003882	-	59	78.000	ENSTBEG00000003628	SPEN	69	80.874	Tupaia_belangeri
ENSKMAG00000003882	-	73	75.355	ENSTTRG00000015704	SPEN	69	77.333	Tursiops_truncatus
ENSKMAG00000003882	-	69	56.257	ENSUAMG00000009600	SPEN	96	80.899	Ursus_americanus
ENSKMAG00000003882	-	69	54.513	ENSUMAG00000021641	SPEN	96	75.159	Ursus_maritimus
ENSKMAG00000003882	-	60	100.000	ENSVVUG00000028951	SPEN	65	100.000	Vulpes_vulpes
ENSKMAG00000003882	-	98	74.129	ENSXCOG00000004516	si:ch1073-335m2.2	100	74.129	Xiphophorus_couchianus
ENSKMAG00000003882	-	100	79.797	ENSXMAG00000021384	-	87	94.944	Xiphophorus_maculatus
ENSKMAG00000003882	-	98	74.627	ENSXMAG00000029887	si:ch1073-335m2.2	100	74.627	Xiphophorus_maculatus