EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000003982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5271 bases
Position: chrLWHD01000144.1:867903-873173
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005262	RVT_1	PF00078.27	2.1e-49	1	1
ENSKMAP00000005262	RNase_H	PF00075.24	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005354	-	5271	-	ENSKMAP00000005262	1244 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000003982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000003982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000003982	-	68	52.725	ENSKMAG00000012711	-	100	52.725
ENSKMAG00000003982	-	100	100.000	ENSKMAG00000004415	-	100	100.000
ENSKMAG00000003982	-	65	77.363	ENSKMAG00000021014	-	99	77.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000003982	-	100	45.280	ENSAMXG00000043500	-	99	45.280	Astyanax_mexicanus
ENSKMAG00000003982	-	99	45.288	ENSDARG00000099201	BX908731.1	99	45.288	Danio_rerio
ENSKMAG00000003982	-	100	47.087	ENSDARG00000103436	BX548028.1	99	47.087	Danio_rerio
ENSKMAG00000003982	-	99	45.288	ENSDARG00000103037	CR848788.1	99	45.288	Danio_rerio
ENSKMAG00000003982	-	100	45.744	ENSORLG00000024423	-	99	45.744	Oryzias_latipes
ENSKMAG00000003982	-	100	45.866	ENSORLG00000023592	-	99	45.866	Oryzias_latipes
ENSKMAG00000003982	-	100	45.866	ENSORLG00000027174	-	99	45.866	Oryzias_latipes
ENSKMAG00000003982	-	100	45.866	ENSORLG00000026314	-	99	45.866	Oryzias_latipes
ENSKMAG00000003982	-	100	46.062	ENSORLG00020011427	-	99	46.062	Oryzias_latipes_hni
ENSKMAG00000003982	-	71	45.940	ENSORLG00020019901	-	100	45.940	Oryzias_latipes_hni
ENSKMAG00000003982	-	100	46.221	ENSORLG00020020238	-	99	46.221	Oryzias_latipes_hni
ENSKMAG00000003982	-	100	46.221	ENSORLG00020018543	-	99	46.221	Oryzias_latipes_hni
ENSKMAG00000003982	-	88	47.273	ENSORLG00015013792	-	99	47.273	Oryzias_latipes_hsok
ENSKMAG00000003982	-	85	47.042	ENSOMEG00000003836	-	98	47.042	Oryzias_melastigma
ENSKMAG00000003982	-	100	47.774	ENSPKIG00000019189	-	99	47.854	Paramormyrops_kingsleyae
ENSKMAG00000003982	-	61	44.254	ENSXMAG00000025430	-	99	44.254	Xiphophorus_maculatus
ENSKMAG00000003982	-	82	50.637	ENSXMAG00000027130	-	99	50.637	Xiphophorus_maculatus
ENSKMAG00000003982	-	100	76.867	ENSXMAG00000021070	-	100	76.466	Xiphophorus_maculatus
ENSKMAG00000003982	-	92	44.107	ENSXMAG00000029466	-	99	43.625	Xiphophorus_maculatus
ENSKMAG00000003982	-	82	50.439	ENSXMAG00000029923	-	99	50.439	Xiphophorus_maculatus
ENSKMAG00000003982	-	82	50.440	ENSXMAG00000023078	-	99	50.440	Xiphophorus_maculatus
ENSKMAG00000003982	-	69	52.491	ENSXMAG00000020874	-	95	52.491	Xiphophorus_maculatus
ENSKMAG00000003982	-	71	44.769	ENSXMAG00000024143	-	100	44.144	Xiphophorus_maculatus
ENSKMAG00000003982	-	100	76.466	ENSXMAG00000028309	-	100	76.064	Xiphophorus_maculatus
ENSKMAG00000003982	-	64	56.359	ENSXMAG00000023126	-	100	56.359	Xiphophorus_maculatus
ENSKMAG00000003982	-	90	48.677	ENSXMAG00000026588	-	99	48.677	Xiphophorus_maculatus
ENSKMAG00000003982	-	63	56.306	ENSXMAG00000023377	-	100	56.306	Xiphophorus_maculatus
ENSKMAG00000003982	-	90	48.677	ENSXMAG00000026248	-	99	48.677	Xiphophorus_maculatus
ENSKMAG00000003982	-	100	55.092	ENSXMAG00000021061	-	100	55.092	Xiphophorus_maculatus
ENSKMAG00000003982	-	100	76.867	ENSXMAG00000021755	-	100	76.466	Xiphophorus_maculatus
ENSKMAG00000003982	-	90	48.677	ENSXMAG00000022223	-	99	48.677	Xiphophorus_maculatus