EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000004066 (Gene tree)
Gene ID: 108251592
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 14802 bases
Position: chrLWHD01000947.1:2785-17586
Accession: 108251592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005463	CPSF_A	PF03178.15	3e-100	1	1
ENSKMAP00000005478	CPSF_A	PF03178.15	4e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005575	-	3809	XM_017441943	ENSKMAP00000005478	1188 (aa)	XP_017297432	-
ENSKMAT00000005560	-	3639	-	ENSKMAP00000005463	1212 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000004066's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004066	sf3b3	99	92.997	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSKMAG00000004066	sf3b3	99	98.294	ENSAPOG00000006172	sf3b3	98	98.294	Acanthochromis_polyacanthus
ENSKMAG00000004066	sf3b3	99	92.845	ENSAMEG00000002187	SF3B3	100	90.656	Ailuropoda_melanoleuca
ENSKMAG00000004066	sf3b3	90	95.247	ENSACIG00000016487	sf3b3	99	93.029	Amphilophus_citrinellus
ENSKMAG00000004066	sf3b3	99	98.207	ENSAOCG00000007158	sf3b3	100	95.974	Amphiprion_ocellaris
ENSKMAG00000004066	sf3b3	99	98.207	ENSAPEG00000022786	sf3b3	100	95.974	Amphiprion_percula
ENSKMAG00000004066	sf3b3	99	97.865	ENSATEG00000013708	sf3b3	100	95.892	Anabas_testudineus
ENSKMAG00000004066	sf3b3	83	93.089	ENSAPLG00000004996	SF3B3	99	93.089	Anas_platyrhynchos
ENSKMAG00000004066	sf3b3	99	93.168	ENSACAG00000001817	SF3B3	100	90.961	Anolis_carolinensis
ENSKMAG00000004066	sf3b3	99	92.997	ENSANAG00000028001	SF3B3	100	90.797	Aotus_nancymaae
ENSKMAG00000004066	sf3b3	99	98.039	ENSACLG00000022555	sf3b3	98	98.039	Astatotilapia_calliptera
ENSKMAG00000004066	sf3b3	99	96.926	ENSAMXG00000003410	sf3b3	100	94.988	Astyanax_mexicanus
ENSKMAG00000004066	sf3b3	99	92.997	ENSBTAG00000010627	SF3B3	100	90.797	Bos_taurus
ENSKMAG00000004066	sf3b3	100	58.448	WBGene00019323	teg-4	100	58.448	Caenorhabditis_elegans
ENSKMAG00000004066	sf3b3	99	92.997	ENSCJAG00000014773	SF3B3	99	90.797	Callithrix_jacchus
ENSKMAG00000004066	sf3b3	99	93.083	ENSCAFG00000020151	SF3B3	100	90.879	Canis_familiaris
ENSKMAG00000004066	sf3b3	99	93.083	ENSCAFG00020020912	SF3B3	100	90.879	Canis_lupus_dingo
ENSKMAG00000004066	sf3b3	99	93.083	ENSCHIG00000019822	SF3B3	100	90.879	Capra_hircus
ENSKMAG00000004066	sf3b3	99	92.997	ENSTSYG00000007910	SF3B3	100	90.797	Carlito_syrichta
ENSKMAG00000004066	sf3b3	84	78.719	ENSCAPG00000001484	SF3B3	92	78.719	Cavia_aperea
ENSKMAG00000004066	sf3b3	99	91.631	ENSCPOG00000000586	SF3B3	100	89.482	Cavia_porcellus
ENSKMAG00000004066	sf3b3	99	92.997	ENSCCAG00000017736	SF3B3	100	90.797	Cebus_capucinus
ENSKMAG00000004066	sf3b3	99	92.997	ENSCATG00000036562	SF3B3	100	90.797	Cercocebus_atys
ENSKMAG00000004066	sf3b3	99	92.997	ENSCLAG00000003921	SF3B3	100	90.797	Chinchilla_lanigera
ENSKMAG00000004066	sf3b3	99	92.997	ENSCSAG00000004371	SF3B3	100	90.797	Chlorocebus_sabaeus
ENSKMAG00000004066	sf3b3	90	89.097	ENSCHOG00000001878	SF3B3	90	89.097	Choloepus_hoffmanni
ENSKMAG00000004066	sf3b3	99	92.741	ENSCPBG00000015853	SF3B3	100	90.551	Chrysemys_picta_bellii
ENSKMAG00000004066	sf3b3	99	79.181	ENSCING00000001342	-	100	77.668	Ciona_intestinalis
ENSKMAG00000004066	sf3b3	99	77.835	ENSCSAVG00000011454	-	100	76.108	Ciona_savignyi
ENSKMAG00000004066	sf3b3	99	89.325	ENSCANG00000042920	SF3B3	100	87.757	Colobus_angolensis_palliatus
ENSKMAG00000004066	sf3b3	99	92.912	ENSCGRG00001015908	Sf3b3	100	90.715	Cricetulus_griseus_chok1gshd
ENSKMAG00000004066	sf3b3	99	92.912	ENSCGRG00000010180	Sf3b3	100	90.715	Cricetulus_griseus_crigri
ENSKMAG00000004066	sf3b3	84	96.208	ENSCSEG00000014192	sf3b3	99	96.208	Cynoglossus_semilaevis
ENSKMAG00000004066	sf3b3	99	98.036	ENSCVAG00000010459	sf3b3	100	95.974	Cyprinodon_variegatus
ENSKMAG00000004066	sf3b3	99	96.840	ENSDARG00000103553	sf3b3	100	94.741	Danio_rerio
ENSKMAG00000004066	sf3b3	83	92.735	ENSDNOG00000043626	SF3B3	100	90.164	Dasypus_novemcinctus
ENSKMAG00000004066	sf3b3	99	92.997	ENSDORG00000014176	Sf3b3	100	90.797	Dipodomys_ordii
ENSKMAG00000004066	sf3b3	99	75.000	FBgn0035162	Sf3b3	100	72.794	Drosophila_melanogaster
ENSKMAG00000004066	sf3b3	84	95.699	ENSETEG00000002729	SF3B3	84	95.699	Echinops_telfairi
ENSKMAG00000004066	sf3b3	100	86.386	ENSEBUG00000006117	sf3b3	100	86.386	Eptatretus_burgeri
ENSKMAG00000004066	sf3b3	99	93.083	ENSEASG00005013376	SF3B3	100	90.879	Equus_asinus_asinus
ENSKMAG00000004066	sf3b3	99	93.083	ENSECAG00000014053	SF3B3	100	90.879	Equus_caballus
ENSKMAG00000004066	sf3b3	91	92.982	ENSEEUG00000015611	SF3B3	93	89.643	Erinaceus_europaeus
ENSKMAG00000004066	sf3b3	99	95.489	ENSELUG00000015417	sf3b3	99	95.489	Esox_lucius
ENSKMAG00000004066	sf3b3	99	93.083	ENSFCAG00000009487	SF3B3	100	90.879	Felis_catus
ENSKMAG00000004066	sf3b3	99	92.827	ENSFALG00000007372	SF3B3	100	90.715	Ficedula_albicollis
ENSKMAG00000004066	sf3b3	99	92.997	ENSFDAG00000002608	SF3B3	100	90.797	Fukomys_damarensis
ENSKMAG00000004066	sf3b3	99	98.292	ENSFHEG00000017824	sf3b3	100	96.138	Fundulus_heteroclitus
ENSKMAG00000004066	sf3b3	99	93.003	ENSGMOG00000008139	sf3b3	100	91.133	Gadus_morhua
ENSKMAG00000004066	sf3b3	99	92.997	ENSGALG00000002531	SF3B3	100	90.879	Gallus_gallus
ENSKMAG00000004066	sf3b3	99	97.865	ENSGAFG00000015206	sf3b3	98	97.866	Gambusia_affinis
ENSKMAG00000004066	sf3b3	99	97.696	ENSGACG00000002646	sf3b3	100	95.649	Gasterosteus_aculeatus
ENSKMAG00000004066	sf3b3	99	92.061	ENSGAGG00000006746	SF3B3	98	92.061	Gopherus_agassizii
ENSKMAG00000004066	sf3b3	99	92.997	ENSGGOG00000003246	SF3B3	100	90.797	Gorilla_gorilla
ENSKMAG00000004066	sf3b3	90	90.680	ENSHBUG00000005960	sf3b3	99	88.651	Haplochromis_burtoni
ENSKMAG00000004066	sf3b3	99	92.997	ENSHGLG00000010135	SF3B3	100	90.797	Heterocephalus_glaber_female
ENSKMAG00000004066	sf3b3	100	89.862	ENSHGLG00100011148	SF3B3	100	89.862	Heterocephalus_glaber_male
ENSKMAG00000004066	sf3b3	99	97.267	ENSHCOG00000011981	sf3b3	100	95.152	Hippocampus_comes
ENSKMAG00000004066	sf3b3	99	97.096	ENSIPUG00000020435	sf3b3	100	95.152	Ictalurus_punctatus
ENSKMAG00000004066	sf3b3	99	92.997	ENSSTOG00000007065	SF3B3	100	90.797	Ictidomys_tridecemlineatus
ENSKMAG00000004066	sf3b3	99	92.997	ENSJJAG00000003948	Sf3b3	100	90.797	Jaculus_jaculus
ENSKMAG00000004066	sf3b3	99	97.694	ENSLBEG00000018302	sf3b3	99	96.733	Labrus_bergylta
ENSKMAG00000004066	sf3b3	97	89.896	ENSLACG00000012501	SF3B3	99	87.957	Latimeria_chalumnae
ENSKMAG00000004066	sf3b3	99	96.502	ENSLOCG00000007566	sf3b3	100	94.335	Lepisosteus_oculatus
ENSKMAG00000004066	sf3b3	99	93.083	ENSLAFG00000012219	SF3B3	100	90.879	Loxodonta_africana
ENSKMAG00000004066	sf3b3	99	92.997	ENSMFAG00000045487	SF3B3	100	90.797	Macaca_fascicularis
ENSKMAG00000004066	sf3b3	99	92.997	ENSMMUG00000017812	SF3B3	100	90.797	Macaca_mulatta
ENSKMAG00000004066	sf3b3	99	92.997	ENSMNEG00000033385	SF3B3	100	90.797	Macaca_nemestrina
ENSKMAG00000004066	sf3b3	99	89.325	ENSMLEG00000043891	SF3B3	100	87.264	Mandrillus_leucophaeus
ENSKMAG00000004066	sf3b3	99	98.377	ENSMAMG00000016837	sf3b3	100	96.138	Mastacembelus_armatus
ENSKMAG00000004066	sf3b3	99	98.036	ENSMZEG00005010836	sf3b3	100	95.892	Maylandia_zebra
ENSKMAG00000004066	sf3b3	87	94.879	ENSMZEG00005026015	sf3b3	99	92.599	Maylandia_zebra
ENSKMAG00000004066	sf3b3	99	92.997	ENSMGAG00000001597	SF3B3	100	90.879	Meleagris_gallopavo
ENSKMAG00000004066	sf3b3	83	76.155	ENSMAUG00000013618	Sf3b3	95	76.529	Mesocricetus_auratus
ENSKMAG00000004066	sf3b3	99	91.986	ENSMICG00000001363	SF3B3	100	90.492	Microcebus_murinus
ENSKMAG00000004066	sf3b3	99	92.912	ENSMOCG00000006108	Sf3b3	100	90.715	Microtus_ochrogaster
ENSKMAG00000004066	sf3b3	87	95.266	ENSMMOG00000002598	sf3b3	97	92.969	Mola_mola
ENSKMAG00000004066	sf3b3	99	88.823	ENSMODG00000014363	SF3B3	100	86.782	Monodelphis_domestica
ENSKMAG00000004066	sf3b3	99	97.438	ENSMALG00000008014	sf3b3	100	95.316	Monopterus_albus
ENSKMAG00000004066	sf3b3	99	92.997	MGP_CAROLIEiJ_G0031563	Sf3b3	100	90.797	Mus_caroli
ENSKMAG00000004066	sf3b3	99	92.912	ENSMUSG00000033732	Sf3b3	100	90.715	Mus_musculus
ENSKMAG00000004066	sf3b3	99	92.912	MGP_SPRETEiJ_G0032681	Sf3b3	100	90.715	Mus_spretus
ENSKMAG00000004066	sf3b3	99	93.083	ENSMPUG00000010277	SF3B3	100	90.879	Mustela_putorius_furo
ENSKMAG00000004066	sf3b3	99	92.912	ENSMLUG00000014607	SF3B3	100	90.715	Myotis_lucifugus
ENSKMAG00000004066	sf3b3	99	92.997	ENSNGAG00000021903	Sf3b3	100	90.797	Nannospalax_galili
ENSKMAG00000004066	sf3b3	83	94.286	ENSNBRG00000007197	sf3b3	99	94.286	Neolamprologus_brichardi
ENSKMAG00000004066	sf3b3	99	91.468	ENSNLEG00000016127	SF3B3	100	89.327	Nomascus_leucogenys
ENSKMAG00000004066	sf3b3	88	97.015	ENSMEUG00000004479	SF3B3	89	97.015	Notamacropus_eugenii
ENSKMAG00000004066	sf3b3	97	89.712	ENSOPRG00000009847	SF3B3	100	87.594	Ochotona_princeps
ENSKMAG00000004066	sf3b3	99	92.997	ENSODEG00000014154	SF3B3	100	90.797	Octodon_degus
ENSKMAG00000004066	sf3b3	99	97.950	ENSONIG00000011198	sf3b3	100	95.892	Oreochromis_niloticus
ENSKMAG00000004066	sf3b3	99	93.168	ENSOANG00000001161	-	100	90.961	Ornithorhynchus_anatinus
ENSKMAG00000004066	sf3b3	99	90.948	ENSOCUG00000004139	SF3B3	100	88.825	Oryctolagus_cuniculus
ENSKMAG00000004066	sf3b3	99	97.780	ENSORLG00000013472	sf3b3	100	95.645	Oryzias_latipes
ENSKMAG00000004066	sf3b3	99	97.780	ENSORLG00020017473	sf3b3	100	95.645	Oryzias_latipes_hni
ENSKMAG00000004066	sf3b3	99	97.609	ENSORLG00015007710	sf3b3	100	95.481	Oryzias_latipes_hsok
ENSKMAG00000004066	sf3b3	99	97.438	ENSOMEG00000014483	sf3b3	100	95.316	Oryzias_melastigma
ENSKMAG00000004066	sf3b3	99	92.675	ENSOGAG00000016051	SF3B3	100	90.492	Otolemur_garnettii
ENSKMAG00000004066	sf3b3	99	92.845	ENSOARG00000004816	SF3B3	100	90.656	Ovis_aries
ENSKMAG00000004066	sf3b3	99	92.997	ENSPPAG00000026807	SF3B3	100	90.797	Pan_paniscus
ENSKMAG00000004066	sf3b3	99	93.083	ENSPPRG00000001686	SF3B3	100	90.879	Panthera_pardus
ENSKMAG00000004066	sf3b3	88	90.106	ENSPTIG00000020382	SF3B3	100	87.764	Panthera_tigris_altaica
ENSKMAG00000004066	sf3b3	99	92.997	ENSPTRG00000008308	SF3B3	100	90.797	Pan_troglodytes
ENSKMAG00000004066	sf3b3	99	92.997	ENSPANG00000024075	SF3B3	100	90.797	Papio_anubis
ENSKMAG00000004066	sf3b3	99	96.755	ENSPKIG00000002712	sf3b3	100	94.659	Paramormyrops_kingsleyae
ENSKMAG00000004066	sf3b3	88	92.891	ENSPSIG00000002232	SF3B3	100	90.432	Pelodiscus_sinensis
ENSKMAG00000004066	sf3b3	99	92.912	ENSPEMG00000008603	Sf3b3	100	90.715	Peromyscus_maniculatus_bairdii
ENSKMAG00000004066	sf3b3	99	90.009	ENSPMAG00000001793	sf3b3	100	88.168	Petromyzon_marinus
ENSKMAG00000004066	sf3b3	99	93.168	ENSPCIG00000014927	SF3B3	100	90.961	Phascolarctos_cinereus
ENSKMAG00000004066	sf3b3	99	98.121	ENSPFOG00000015516	sf3b3	100	96.056	Poecilia_formosa
ENSKMAG00000004066	sf3b3	99	98.121	ENSPLAG00000014330	sf3b3	100	96.056	Poecilia_latipinna
ENSKMAG00000004066	sf3b3	99	98.207	ENSPMEG00000019856	sf3b3	100	96.138	Poecilia_mexicana
ENSKMAG00000004066	sf3b3	83	98.069	ENSPREG00000019669	sf3b3	97	98.069	Poecilia_reticulata
ENSKMAG00000004066	sf3b3	95	92.537	ENSPPYG00000007539	SF3B3	100	92.537	Pongo_abelii
ENSKMAG00000004066	sf3b3	91	82.943	ENSPCAG00000002623	SF3B3	91	82.943	Procavia_capensis
ENSKMAG00000004066	sf3b3	85	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSKMAG00000004066	sf3b3	99	92.997	ENSPVAG00000000684	SF3B3	100	90.797	Pteropus_vampyrus
ENSKMAG00000004066	sf3b3	99	97.950	ENSPNYG00000003528	sf3b3	100	95.809	Pundamilia_nyererei
ENSKMAG00000004066	sf3b3	99	97.096	ENSPNAG00000015419	sf3b3	100	95.152	Pygocentrus_nattereri
ENSKMAG00000004066	sf3b3	99	92.912	ENSRNOG00000017724	Sf3b3	100	90.715	Rattus_norvegicus
ENSKMAG00000004066	sf3b3	99	92.997	ENSRBIG00000021904	SF3B3	100	90.797	Rhinopithecus_bieti
ENSKMAG00000004066	sf3b3	99	92.997	ENSRROG00000045703	SF3B3	100	90.797	Rhinopithecus_roxellana
ENSKMAG00000004066	sf3b3	99	92.997	ENSSBOG00000029156	SF3B3	100	90.797	Saimiri_boliviensis_boliviensis
ENSKMAG00000004066	sf3b3	99	93.168	ENSSHAG00000000372	SF3B3	100	90.961	Sarcophilus_harrisii
ENSKMAG00000004066	sf3b3	99	97.011	ENSSFOG00015012877	sf3b3	100	94.906	Scleropages_formosus
ENSKMAG00000004066	sf3b3	99	97.267	ENSSMAG00000014386	sf3b3	100	95.316	Scophthalmus_maximus
ENSKMAG00000004066	sf3b3	99	98.207	ENSSDUG00000021201	sf3b3	100	96.056	Seriola_dumerili
ENSKMAG00000004066	sf3b3	99	98.121	ENSSLDG00000017532	sf3b3	100	95.974	Seriola_lalandi_dorsalis
ENSKMAG00000004066	sf3b3	92	92.831	ENSSARG00000006917	SF3B3	93	91.304	Sorex_araneus
ENSKMAG00000004066	sf3b3	99	92.827	ENSSPUG00000006253	SF3B3	100	90.633	Sphenodon_punctatus
ENSKMAG00000004066	sf3b3	99	90.094	ENSSPAG00000003125	sf3b3	100	88.250	Stegastes_partitus
ENSKMAG00000004066	sf3b3	99	93.083	ENSSSCG00000025323	SF3B3	97	94.106	Sus_scrofa
ENSKMAG00000004066	sf3b3	99	92.918	ENSTGUG00000006082	SF3B3	100	90.805	Taeniopygia_guttata
ENSKMAG00000004066	sf3b3	92	97.059	ENSTNIG00000004857	sf3b3	100	97.059	Tetraodon_nigroviridis
ENSKMAG00000004066	sf3b3	96	78.785	ENSTBEG00000002946	SF3B3	100	78.785	Tupaia_belangeri
ENSKMAG00000004066	sf3b3	99	92.229	ENSTTRG00000005855	SF3B3	100	90.058	Tursiops_truncatus
ENSKMAG00000004066	sf3b3	99	93.083	ENSUAMG00000006780	SF3B3	100	90.879	Ursus_americanus
ENSKMAG00000004066	sf3b3	99	93.083	ENSUMAG00000017757	SF3B3	100	90.879	Ursus_maritimus
ENSKMAG00000004066	sf3b3	99	77.626	ENSVPAG00000003202	SF3B3	100	76.007	Vicugna_pacos
ENSKMAG00000004066	sf3b3	99	93.083	ENSVVUG00000017922	SF3B3	100	90.879	Vulpes_vulpes
ENSKMAG00000004066	sf3b3	99	93.254	ENSXETG00000032869	SF3B3	100	91.208	Xenopus_tropicalis
ENSKMAG00000004066	sf3b3	79	98.301	ENSXCOG00000013628	sf3b3	97	98.301	Xiphophorus_couchianus
ENSKMAG00000004066	sf3b3	99	98.121	ENSXMAG00000006334	sf3b3	99	98.171	Xiphophorus_maculatus