EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000004184 (Gene tree)
Gene ID: 108231130
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5720 bases
Position: chrLWHD01000011.1:4206284-4212003
Accession: 108231130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005516	RNase_H2_suC	PF08615.11	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005613	-	3234	XM_017408012	ENSKMAP00000005516	136 (aa)	XP_017263501	UPI0007F8C1FF

Gene Model

Click here to download ENSKMAG00000004184's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004184	rnaseh2c	100	84.559	ENSAPOG00000012901	rnaseh2c	99	84.559	Acanthochromis_polyacanthus
ENSKMAG00000004184	rnaseh2c	100	80.147	ENSACIG00000022433	rnaseh2c	100	80.147	Amphilophus_citrinellus
ENSKMAG00000004184	rnaseh2c	100	84.559	ENSAOCG00000016855	rnaseh2c	100	84.559	Amphiprion_ocellaris
ENSKMAG00000004184	rnaseh2c	100	85.294	ENSAPEG00000009850	rnaseh2c	100	85.294	Amphiprion_percula
ENSKMAG00000004184	rnaseh2c	100	81.618	ENSATEG00000014395	rnaseh2c	100	81.618	Anabas_testudineus
ENSKMAG00000004184	rnaseh2c	100	77.941	ENSACLG00000016950	rnaseh2c	100	77.941	Astatotilapia_calliptera
ENSKMAG00000004184	rnaseh2c	99	61.481	ENSAMXG00000001210	rnaseh2c	100	61.481	Astyanax_mexicanus
ENSKMAG00000004184	rnaseh2c	99	52.239	ENSCPBG00000023408	-	96	52.239	Chrysemys_picta_bellii
ENSKMAG00000004184	rnaseh2c	100	77.206	ENSCSEG00000005808	rnaseh2c	99	77.206	Cynoglossus_semilaevis
ENSKMAG00000004184	rnaseh2c	100	80.147	ENSCVAG00000006337	rnaseh2c	100	80.147	Cyprinodon_variegatus
ENSKMAG00000004184	rnaseh2c	100	63.235	ENSDARG00000089637	rnaseh2c	99	63.235	Danio_rerio
ENSKMAG00000004184	rnaseh2c	88	49.206	ENSEBUG00000014939	rnaseh2c	80	49.206	Eptatretus_burgeri
ENSKMAG00000004184	rnaseh2c	99	71.111	ENSELUG00000007345	rnaseh2c	99	71.111	Esox_lucius
ENSKMAG00000004184	rnaseh2c	96	80.769	ENSFHEG00000002419	rnaseh2c	95	80.769	Fundulus_heteroclitus
ENSKMAG00000004184	rnaseh2c	65	75.281	ENSGMOG00000008727	rnaseh2c	99	75.281	Gadus_morhua
ENSKMAG00000004184	rnaseh2c	100	80.147	ENSGAFG00000016755	rnaseh2c	83	80.147	Gambusia_affinis
ENSKMAG00000004184	rnaseh2c	99	52.239	ENSGAGG00000008193	-	96	52.239	Gopherus_agassizii
ENSKMAG00000004184	rnaseh2c	100	79.412	ENSHBUG00000012806	rnaseh2c	100	79.412	Haplochromis_burtoni
ENSKMAG00000004184	rnaseh2c	100	72.059	ENSHCOG00000007177	rnaseh2c	100	72.059	Hippocampus_comes
ENSKMAG00000004184	rnaseh2c	100	64.706	ENSIPUG00000018044	rnaseh2c	100	64.706	Ictalurus_punctatus
ENSKMAG00000004184	rnaseh2c	100	78.102	ENSLBEG00000005742	rnaseh2c	100	78.102	Labrus_bergylta
ENSKMAG00000004184	rnaseh2c	95	55.039	ENSLACG00000010120	-	93	54.545	Latimeria_chalumnae
ENSKMAG00000004184	rnaseh2c	100	78.676	ENSMAMG00000021610	rnaseh2c	100	78.676	Mastacembelus_armatus
ENSKMAG00000004184	rnaseh2c	100	78.676	ENSMZEG00005004796	rnaseh2c	100	78.676	Maylandia_zebra
ENSKMAG00000004184	rnaseh2c	100	79.412	ENSMMOG00000002869	rnaseh2c	100	81.250	Mola_mola
ENSKMAG00000004184	rnaseh2c	100	82.482	ENSMALG00000012198	rnaseh2c	100	82.482	Monopterus_albus
ENSKMAG00000004184	rnaseh2c	100	79.412	ENSNBRG00000001462	rnaseh2c	100	79.412	Neolamprologus_brichardi
ENSKMAG00000004184	rnaseh2c	100	78.676	ENSONIG00000005338	rnaseh2c	99	78.676	Oreochromis_niloticus
ENSKMAG00000004184	rnaseh2c	100	76.471	ENSORLG00000023473	rnaseh2c	100	76.471	Oryzias_latipes
ENSKMAG00000004184	rnaseh2c	100	76.471	ENSORLG00020019053	rnaseh2c	91	76.471	Oryzias_latipes_hni
ENSKMAG00000004184	rnaseh2c	100	77.206	ENSORLG00015017067	rnaseh2c	91	77.206	Oryzias_latipes_hsok
ENSKMAG00000004184	rnaseh2c	100	77.206	ENSOMEG00000018607	rnaseh2c	100	77.206	Oryzias_melastigma
ENSKMAG00000004184	rnaseh2c	100	61.765	ENSPKIG00000019331	rnaseh2c	100	61.765	Paramormyrops_kingsleyae
ENSKMAG00000004184	rnaseh2c	100	78.676	ENSPFOG00000009415	rnaseh2c	100	78.676	Poecilia_formosa
ENSKMAG00000004184	rnaseh2c	100	78.676	ENSPLAG00000023330	rnaseh2c	100	78.676	Poecilia_latipinna
ENSKMAG00000004184	rnaseh2c	100	79.412	ENSPMEG00000003696	rnaseh2c	100	79.412	Poecilia_mexicana
ENSKMAG00000004184	rnaseh2c	100	72.789	ENSPREG00000015384	rnaseh2c	73	72.789	Poecilia_reticulata
ENSKMAG00000004184	rnaseh2c	100	79.412	ENSPNYG00000014766	rnaseh2c	100	79.412	Pundamilia_nyererei
ENSKMAG00000004184	rnaseh2c	99	60.000	ENSPNAG00000019111	rnaseh2c	99	60.000	Pygocentrus_nattereri
ENSKMAG00000004184	rnaseh2c	99	65.185	ENSSFOG00015005760	rnaseh2c	99	65.185	Scleropages_formosus
ENSKMAG00000004184	rnaseh2c	100	79.412	ENSSMAG00000017738	rnaseh2c	100	79.412	Scophthalmus_maximus
ENSKMAG00000004184	rnaseh2c	100	83.088	ENSSDUG00000017285	rnaseh2c	100	83.088	Seriola_dumerili
ENSKMAG00000004184	rnaseh2c	100	83.088	ENSSLDG00000016030	rnaseh2c	100	83.088	Seriola_lalandi_dorsalis
ENSKMAG00000004184	rnaseh2c	96	48.120	ENSSPUG00000000842	-	89	47.059	Sphenodon_punctatus
ENSKMAG00000004184	rnaseh2c	100	80.147	ENSSPAG00000007536	rnaseh2c	100	80.147	Stegastes_partitus
ENSKMAG00000004184	rnaseh2c	100	72.794	ENSTRUG00000021845	rnaseh2c	100	72.794	Takifugu_rubripes
ENSKMAG00000004184	rnaseh2c	100	75.000	ENSTNIG00000000431	rnaseh2c	100	75.000	Tetraodon_nigroviridis
ENSKMAG00000004184	rnaseh2c	99	49.254	ENSXETG00000032466	-	98	49.254	Xenopus_tropicalis
ENSKMAG00000004184	rnaseh2c	100	78.676	ENSXCOG00000001611	rnaseh2c	100	78.676	Xiphophorus_couchianus
ENSKMAG00000004184	rnaseh2c	100	80.882	ENSXMAG00000003147	rnaseh2c	83	80.882	Xiphophorus_maculatus