EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000004221 (Gene tree)
Gene ID: 108236988
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 22337 bases
Position: chrLWHD01000043.1:2427939-2450275
Accession: 108236988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005997	Exo_endo_phos	PF03372.23	1.7e-15	1	1
ENSKMAP00000005964	Exo_endo_phos	PF03372.23	8.3e-14	1	1
ENSKMAP00000005997	DUF1866	PF08952.11	8.6e-56	1	1
ENSKMAP00000005964	DUF1866	PF08952.11	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000006068	-	4716	XM_017418124	ENSKMAP00000005964	1571 (aa)	XP_017273613	-
ENSKMAT00000006101	-	3438	-	ENSKMAP00000005997	1145 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000004221's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr00562	Inositol phosphate metabolism	KEGG
kmr01100	Metabolic pathways	KEGG
kmr04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004221	synj1	94	73.303	ENSG00000159082	SYNJ1	100	82.640	Homo_sapiens
ENSKMAG00000004221	synj1	93	87.329	ENSAPOG00000002809	synj1	95	92.987	Acanthochromis_polyacanthus
ENSKMAG00000004221	synj1	87	76.938	ENSAMEG00000015028	SYNJ1	68	75.204	Ailuropoda_melanoleuca
ENSKMAG00000004221	synj1	100	81.635	ENSACIG00000008857	synj1	99	85.015	Amphilophus_citrinellus
ENSKMAG00000004221	synj1	100	82.004	ENSAOCG00000009835	synj1	99	88.744	Amphiprion_ocellaris
ENSKMAG00000004221	synj1	100	82.640	ENSAPEG00000021010	synj1	100	81.133	Amphiprion_percula
ENSKMAG00000004221	synj1	100	79.555	ENSATEG00000002306	synj1	100	79.287	Anabas_testudineus
ENSKMAG00000004221	synj1	87	76.517	ENSAPLG00000011832	SYNJ1	69	74.751	Anas_platyrhynchos
ENSKMAG00000004221	synj1	93	73.655	ENSACAG00000003006	-	84	75.180	Anolis_carolinensis
ENSKMAG00000004221	synj1	95	72.801	ENSANAG00000027325	SYNJ1	87	72.591	Aotus_nancymaae
ENSKMAG00000004221	synj1	100	82.374	ENSACLG00000002255	synj1	100	80.557	Astatotilapia_calliptera
ENSKMAG00000004221	synj1	87	89.318	ENSAMXG00000008208	synj1	99	73.590	Astyanax_mexicanus
ENSKMAG00000004221	synj1	97	72.346	ENSBTAG00000003063	SYNJ1	83	75.656	Bos_taurus
ENSKMAG00000004221	synj1	94	73.321	ENSCJAG00000009187	SYNJ1	87	72.679	Callithrix_jacchus
ENSKMAG00000004221	synj1	96	71.583	ENSCAFG00000009041	SYNJ1	86	74.886	Canis_familiaris
ENSKMAG00000004221	synj1	94	71.441	ENSCAFG00020025776	SYNJ1	84	74.932	Canis_lupus_dingo
ENSKMAG00000004221	synj1	97	72.257	ENSCHIG00000005095	SYNJ1	72	76.117	Capra_hircus
ENSKMAG00000004221	synj1	92	72.480	ENSTSYG00000014541	SYNJ1	85	74.842	Carlito_syrichta
ENSKMAG00000004221	synj1	84	67.380	ENSCAPG00000014483	SYNJ1	75	66.257	Cavia_aperea
ENSKMAG00000004221	synj1	87	77.646	ENSCPOG00000012182	SYNJ1	83	75.432	Cavia_porcellus
ENSKMAG00000004221	synj1	95	72.983	ENSCCAG00000020825	SYNJ1	87	72.414	Cebus_capucinus
ENSKMAG00000004221	synj1	94	73.122	ENSCATG00000033891	SYNJ1	89	73.529	Cercocebus_atys
ENSKMAG00000004221	synj1	93	71.982	ENSCLAG00000009796	SYNJ1	100	82.158	Chinchilla_lanigera
ENSKMAG00000004221	synj1	92	72.934	ENSCSAG00000009654	SYNJ1	84	75.294	Chlorocebus_sabaeus
ENSKMAG00000004221	synj1	72	71.561	ENSCHOG00000012390	SYNJ1	54	71.561	Choloepus_hoffmanni
ENSKMAG00000004221	synj1	95	73.828	ENSCPBG00000006402	SYNJ1	88	75.996	Chrysemys_picta_bellii
ENSKMAG00000004221	synj1	94	73.122	ENSCANG00000031359	SYNJ1	85	75.294	Colobus_angolensis_palliatus
ENSKMAG00000004221	synj1	96	71.968	ENSCGRG00001010861	Synj1	86	72.405	Cricetulus_griseus_chok1gshd
ENSKMAG00000004221	synj1	96	71.186	ENSCGRG00000015749	Synj1	100	81.727	Cricetulus_griseus_crigri
ENSKMAG00000004221	synj1	93	86.194	ENSCSEG00000019614	synj1	86	91.439	Cynoglossus_semilaevis
ENSKMAG00000004221	synj1	86	89.555	ENSCVAG00000019250	synj1	99	79.130	Cyprinodon_variegatus
ENSKMAG00000004221	synj1	95	82.294	ENSDARG00000025011	synj1	96	83.254	Danio_rerio
ENSKMAG00000004221	synj1	92	69.864	ENSDNOG00000010732	SYNJ1	70	72.317	Dasypus_novemcinctus
ENSKMAG00000004221	synj1	61	82.302	ENSDORG00000014735	-	100	82.302	Dipodomys_ordii
ENSKMAG00000004221	synj1	72	77.778	ENSETEG00000018674	SYNJ1	60	77.778	Echinops_telfairi
ENSKMAG00000004221	synj1	87	77.745	ENSEASG00005006287	SYNJ1	98	77.490	Equus_asinus_asinus
ENSKMAG00000004221	synj1	87	77.646	ENSECAG00000004829	SYNJ1	86	76.287	Equus_caballus
ENSKMAG00000004221	synj1	88	70.260	ENSEEUG00000005150	SYNJ1	60	70.260	Erinaceus_europaeus
ENSKMAG00000004221	synj1	100	70.671	ENSELUG00000009731	synj1	100	69.212	Esox_lucius
ENSKMAG00000004221	synj1	87	77.745	ENSFCAG00000012498	SYNJ1	85	75.023	Felis_catus
ENSKMAG00000004221	synj1	58	71.408	ENSFALG00000004680	SYNJ1	61	69.856	Ficedula_albicollis
ENSKMAG00000004221	synj1	93	72.448	ENSFDAG00000016818	SYNJ1	100	82.590	Fukomys_damarensis
ENSKMAG00000004221	synj1	87	92.165	ENSFHEG00000017689	synj1	99	81.012	Fundulus_heteroclitus
ENSKMAG00000004221	synj1	86	85.189	ENSGMOG00000014852	synj1	77	86.092	Gadus_morhua
ENSKMAG00000004221	synj1	96	62.792	ENSGALG00000034317	SYNJ1	70	75.786	Gallus_gallus
ENSKMAG00000004221	synj1	87	91.972	ENSGAFG00000019466	synj1	100	79.890	Gambusia_affinis
ENSKMAG00000004221	synj1	92	82.815	ENSGACG00000020575	synj1	83	88.026	Gasterosteus_aculeatus
ENSKMAG00000004221	synj1	95	73.768	ENSGAGG00000022523	SYNJ1	83	74.978	Gopherus_agassizii
ENSKMAG00000004221	synj1	94	73.213	ENSGGOG00000015945	SYNJ1	89	73.440	Gorilla_gorilla
ENSKMAG00000004221	synj1	100	81.097	ENSHBUG00000007774	synj1	94	92.532	Haplochromis_burtoni
ENSKMAG00000004221	synj1	92	72.011	ENSHGLG00000006420	SYNJ1	100	82.014	Heterocephalus_glaber_female
ENSKMAG00000004221	synj1	92	72.011	ENSHGLG00100012591	SYNJ1	100	82.014	Heterocephalus_glaber_male
ENSKMAG00000004221	synj1	95	80.499	ENSHCOG00000012774	synj1	86	93.387	Hippocampus_comes
ENSKMAG00000004221	synj1	87	88.812	ENSIPUG00000010691	SYNJ1	99	75.763	Ictalurus_punctatus
ENSKMAG00000004221	synj1	92	72.901	ENSSTOG00000015806	SYNJ1	84	75.294	Ictidomys_tridecemlineatus
ENSKMAG00000004221	synj1	87	71.316	ENSJJAG00000020168	Synj1	69	70.191	Jaculus_jaculus
ENSKMAG00000004221	synj1	93	85.870	ENSLBEG00000015081	synj1	95	91.065	Labrus_bergylta
ENSKMAG00000004221	synj1	95	71.416	ENSLACG00000005928	SYNJ1	70	75.181	Latimeria_chalumnae
ENSKMAG00000004221	synj1	95	78.245	ENSLOCG00000009230	synj1	73	82.192	Lepisosteus_oculatus
ENSKMAG00000004221	synj1	87	76.447	ENSLAFG00000011806	SYNJ1	69	74.842	Loxodonta_africana
ENSKMAG00000004221	synj1	91	72.488	ENSMFAG00000018883	SYNJ1	84	74.140	Macaca_fascicularis
ENSKMAG00000004221	synj1	92	72.843	ENSMMUG00000004624	SYNJ1	84	75.475	Macaca_mulatta
ENSKMAG00000004221	synj1	94	73.122	ENSMNEG00000040077	SYNJ1	79	75.294	Macaca_nemestrina
ENSKMAG00000004221	synj1	94	73.122	ENSMLEG00000037029	SYNJ1	85	75.204	Mandrillus_leucophaeus
ENSKMAG00000004221	synj1	100	81.681	ENSMAMG00000013404	synj1	100	80.825	Mastacembelus_armatus
ENSKMAG00000004221	synj1	100	82.435	ENSMZEG00005024358	synj1	100	86.480	Maylandia_zebra
ENSKMAG00000004221	synj1	94	69.550	ENSMGAG00000014522	SYNJ1	73	69.983	Meleagris_gallopavo
ENSKMAG00000004221	synj1	96	71.390	ENSMAUG00000009743	Synj1	100	82.014	Mesocricetus_auratus
ENSKMAG00000004221	synj1	94	73.273	ENSMICG00000034953	SYNJ1	86	76.117	Microcebus_murinus
ENSKMAG00000004221	synj1	87	89.932	ENSMMOG00000010203	synj1	99	84.086	Mola_mola
ENSKMAG00000004221	synj1	87	73.503	ENSMODG00000021073	SYNJ1	82	72.192	Monodelphis_domestica
ENSKMAG00000004221	synj1	93	86.758	ENSMALG00000014015	synj1	100	78.131	Monopterus_albus
ENSKMAG00000004221	synj1	96	71.632	MGP_CAROLIEiJ_G0020951	Synj1	100	82.302	Mus_caroli
ENSKMAG00000004221	synj1	94	72.818	ENSMUSG00000022973	Synj1	100	82.302	Mus_musculus
ENSKMAG00000004221	synj1	94	72.636	MGP_PahariEiJ_G0016656	Synj1	100	82.302	Mus_pahari
ENSKMAG00000004221	synj1	94	72.909	MGP_SPRETEiJ_G0021857	Synj1	100	82.446	Mus_spretus
ENSKMAG00000004221	synj1	87	76.833	ENSMPUG00000001153	SYNJ1	70	74.932	Mustela_putorius_furo
ENSKMAG00000004221	synj1	59	80.357	ENSMLUG00000026584	-	100	80.357	Myotis_lucifugus
ENSKMAG00000004221	synj1	63	54.308	ENSMLUG00000005764	-	55	70.085	Myotis_lucifugus
ENSKMAG00000004221	synj1	96	71.670	ENSNGAG00000000453	Synj1	100	82.158	Nannospalax_galili
ENSKMAG00000004221	synj1	100	80.366	ENSNBRG00000011936	synj1	99	81.791	Neolamprologus_brichardi
ENSKMAG00000004221	synj1	78	69.668	ENSNLEG00000003734	SYNJ1	84	72.176	Nomascus_leucogenys
ENSKMAG00000004221	synj1	77	72.067	ENSMEUG00000004158	-	61	72.067	Notamacropus_eugenii
ENSKMAG00000004221	synj1	88	76.727	ENSOPRG00000013602	SYNJ1	64	77.007	Ochotona_princeps
ENSKMAG00000004221	synj1	61	82.158	ENSODEG00000002409	-	100	82.158	Octodon_degus
ENSKMAG00000004221	synj1	93	86.139	ENSONIG00000004667	synj1	78	92.545	Oreochromis_niloticus
ENSKMAG00000004221	synj1	84	76.036	ENSOANG00000006929	SYNJ1	69	73.458	Ornithorhynchus_anatinus
ENSKMAG00000004221	synj1	87	77.233	ENSOCUG00000001420	SYNJ1	67	76.989	Oryctolagus_cuniculus
ENSKMAG00000004221	synj1	93	85.225	ENSORLG00000004320	synj1	93	91.123	Oryzias_latipes
ENSKMAG00000004221	synj1	87	88.126	ENSORLG00020011994	synj1	98	85.540	Oryzias_latipes_hni
ENSKMAG00000004221	synj1	87	91.098	ENSORLG00015018077	synj1	97	78.954	Oryzias_latipes_hsok
ENSKMAG00000004221	synj1	98	81.893	ENSOMEG00000014322	synj1	99	86.176	Oryzias_melastigma
ENSKMAG00000004221	synj1	92	69.565	ENSOGAG00000006010	SYNJ1	68	72.112	Otolemur_garnettii
ENSKMAG00000004221	synj1	97	71.756	ENSOARG00000013414	SYNJ1	68	74.368	Ovis_aries
ENSKMAG00000004221	synj1	94	73.213	ENSPPAG00000026784	SYNJ1	85	75.385	Pan_paniscus
ENSKMAG00000004221	synj1	87	77.745	ENSPPRG00000023469	SYNJ1	85	75.023	Panthera_pardus
ENSKMAG00000004221	synj1	87	77.844	ENSPTIG00000007930	SYNJ1	85	75.113	Panthera_tigris_altaica
ENSKMAG00000004221	synj1	94	73.213	ENSPTRG00000023787	SYNJ1	89	73.619	Pan_troglodytes
ENSKMAG00000004221	synj1	94	73.213	ENSPTRG00000048135	-	89	73.619	Pan_troglodytes
ENSKMAG00000004221	synj1	94	73.122	ENSPANG00000022531	SYNJ1	85	75.294	Papio_anubis
ENSKMAG00000004221	synj1	93	82.724	ENSPKIG00000022603	synj1	89	85.662	Paramormyrops_kingsleyae
ENSKMAG00000004221	synj1	93	89.866	ENSPMGG00000016831	synj1	99	90.500	Periophthalmus_magnuspinnatus
ENSKMAG00000004221	synj1	87	77.134	ENSPEMG00000018767	Synj1	100	82.446	Peromyscus_maniculatus_bairdii
ENSKMAG00000004221	synj1	87	57.910	ENSPMAG00000002887	synj1	74	59.538	Petromyzon_marinus
ENSKMAG00000004221	synj1	88	75.415	ENSPCIG00000016372	SYNJ1	83	75.046	Phascolarctos_cinereus
ENSKMAG00000004221	synj1	93	87.477	ENSPFOG00000016886	synj1	100	85.962	Poecilia_formosa
ENSKMAG00000004221	synj1	99	80.898	ENSPLAG00000017559	synj1	100	84.952	Poecilia_latipinna
ENSKMAG00000004221	synj1	93	86.059	ENSPMEG00000007643	synj1	100	79.539	Poecilia_mexicana
ENSKMAG00000004221	synj1	93	88.198	ENSPREG00000012412	synj1	100	80.159	Poecilia_reticulata
ENSKMAG00000004221	synj1	92	72.752	ENSPPYG00000011365	SYNJ1	79	75.113	Pongo_abelii
ENSKMAG00000004221	synj1	73	84.286	ENSPCAG00000009906	SYNJ1	58	84.286	Procavia_capensis
ENSKMAG00000004221	synj1	85	76.382	ENSPCOG00000024841	SYNJ1	80	75.931	Propithecus_coquereli
ENSKMAG00000004221	synj1	87	72.933	ENSPVAG00000000892	SYNJ1	69	71.364	Pteropus_vampyrus
ENSKMAG00000004221	synj1	100	81.258	ENSPNYG00000022989	synj1	100	81.003	Pundamilia_nyererei
ENSKMAG00000004221	synj1	95	83.727	ENSPNAG00000021119	synj1	91	87.659	Pygocentrus_nattereri
ENSKMAG00000004221	synj1	94	72.398	ENSRNOG00000002051	Synj1	85	75.135	Rattus_norvegicus
ENSKMAG00000004221	synj1	94	73.032	ENSRBIG00000034477	SYNJ1	85	75.204	Rhinopithecus_bieti
ENSKMAG00000004221	synj1	92	72.934	ENSRROG00000039256	SYNJ1	85	75.294	Rhinopithecus_roxellana
ENSKMAG00000004221	synj1	93	73.473	ENSSBOG00000021001	SYNJ1	87	72.591	Saimiri_boliviensis_boliviensis
ENSKMAG00000004221	synj1	88	76.000	ENSSHAG00000008538	SYNJ1	70	75.251	Sarcophilus_harrisii
ENSKMAG00000004221	synj1	93	82.805	ENSSFOG00015006095	synj1	100	73.197	Scleropages_formosus
ENSKMAG00000004221	synj1	100	82.868	ENSSMAG00000018066	synj1	100	82.461	Scophthalmus_maximus
ENSKMAG00000004221	synj1	93	87.840	ENSSDUG00000013058	synj1	100	82.271	Seriola_dumerili
ENSKMAG00000004221	synj1	93	87.477	ENSSLDG00000021406	synj1	100	81.906	Seriola_lalandi_dorsalis
ENSKMAG00000004221	synj1	87	78.140	ENSSPUG00000012552	SYNJ1	71	76.648	Sphenodon_punctatus
ENSKMAG00000004221	synj1	95	82.796	ENSSPAG00000006812	SYNJ1	100	80.898	Stegastes_partitus
ENSKMAG00000004221	synj1	100	85.274	ENSSPAG00000017029	synj1	100	83.816	Stegastes_partitus
ENSKMAG00000004221	synj1	94	73.358	ENSSSCG00000012035	SYNJ1	85	74.639	Sus_scrofa
ENSKMAG00000004221	synj1	87	76.465	ENSTGUG00000013445	SYNJ1	70	74.439	Taeniopygia_guttata
ENSKMAG00000004221	synj1	99	79.974	ENSTRUG00000006907	synj1	98	82.197	Takifugu_rubripes
ENSKMAG00000004221	synj1	93	81.406	ENSTNIG00000009940	synj1	83	86.960	Tetraodon_nigroviridis
ENSKMAG00000004221	synj1	83	82.595	ENSTBEG00000016298	SYNJ1	56	82.595	Tupaia_belangeri
ENSKMAG00000004221	synj1	82	76.554	ENSTTRG00000002222	SYNJ1	71	68.784	Tursiops_truncatus
ENSKMAG00000004221	synj1	87	77.844	ENSUAMG00000018606	SYNJ1	99	78.772	Ursus_americanus
ENSKMAG00000004221	synj1	87	77.844	ENSUMAG00000018419	SYNJ1	99	78.772	Ursus_maritimus
ENSKMAG00000004221	synj1	84	84.286	ENSVPAG00000001241	SYNJ1	74	84.286	Vicugna_pacos
ENSKMAG00000004221	synj1	94	72.317	ENSVVUG00000023125	SYNJ1	84	75.023	Vulpes_vulpes
ENSKMAG00000004221	synj1	87	74.172	ENSXETG00000009899	synj1	69	73.195	Xenopus_tropicalis
ENSKMAG00000004221	synj1	93	86.945	ENSXCOG00000011896	synj1	99	89.025	Xiphophorus_couchianus
ENSKMAG00000004221	synj1	93	86.673	ENSXMAG00000017524	synj1	100	77.281	Xiphophorus_maculatus