EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000004325 (Gene tree)
Gene ID: 108246833
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 14766 bases
Position: chrLWHD01000236.1:374961-389726
Accession: 108246833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005708	IF-2	PF11987.8	4.1e-19	1	1
ENSKMAP00000005683	IF-2	PF11987.8	4.2e-19	1	1
ENSKMAP00000005708	GTP_EFTU	PF00009.27	1.1e-34	1	1
ENSKMAP00000005683	GTP_EFTU	PF00009.27	1.1e-34	1	1
ENSKMAP00000005683	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSKMAP00000005708	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005808	-	5094	XM_017434564	ENSKMAP00000005708	1195 (aa)	XP_017290053	UPI0007F8BB3E
ENSKMAT00000005783	-	5118	XM_017434563	ENSKMAP00000005683	1203 (aa)	XP_017290052	UPI0007F87ADA

Gene Model

Click here to download ENSKMAG00000004325's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004325	eif5b	82	85.656	ENSAPOG00000004375	eif5b	100	84.083	Acanthochromis_polyacanthus
ENSKMAG00000004325	eif5b	82	88.548	ENSACIG00000024324	eif5b	79	88.589	Amphilophus_citrinellus
ENSKMAG00000004325	eif5b	100	83.140	ENSAOCG00000018386	eif5b	100	83.361	Amphiprion_ocellaris
ENSKMAG00000004325	eif5b	76	83.599	ENSATEG00000011451	-	77	81.840	Anabas_testudineus
ENSKMAG00000004325	eif5b	100	84.653	ENSATEG00000006765	eif5b	98	84.241	Anabas_testudineus
ENSKMAG00000004325	eif5b	74	84.529	ENSATEG00000011259	eif5b	87	85.034	Anabas_testudineus
ENSKMAG00000004325	eif5b	100	69.306	ENSACAG00000008305	-	74	79.571	Anolis_carolinensis
ENSKMAG00000004325	eif5b	74	81.352	ENSACLG00000005530	eif5b	87	81.679	Astatotilapia_calliptera
ENSKMAG00000004325	eif5b	99	72.622	ENSAMXG00000018383	eif5b	74	83.951	Astyanax_mexicanus
ENSKMAG00000004325	eif5b	97	63.000	ENSCJAG00000009960	-	71	72.686	Callithrix_jacchus
ENSKMAG00000004325	eif5b	98	64.535	ENSCAPG00000014619	-	73	73.613	Cavia_aperea
ENSKMAG00000004325	eif5b	100	68.314	ENSCPOG00000011967	-	72	78.076	Cavia_porcellus
ENSKMAG00000004325	eif5b	56	65.396	ENSCHOG00000002137	-	58	80.184	Choloepus_hoffmanni
ENSKMAG00000004325	eif5b	51	64.286	ENSCSAVG00000008808	-	66	64.286	Ciona_savignyi
ENSKMAG00000004325	eif5b	52	92.937	ENSCSEG00000014153	eif5b	100	78.197	Cynoglossus_semilaevis
ENSKMAG00000004325	eif5b	100	82.895	ENSCVAG00000019619	eif5b	100	84.280	Cyprinodon_variegatus
ENSKMAG00000004325	eif5b	74	84.004	ENSDARG00000016548	eif5b	70	84.537	Danio_rerio
ENSKMAG00000004325	eif5b	51	70.962	FBgn0026259	eIF5B	54	70.962	Drosophila_melanogaster
ENSKMAG00000004325	eif5b	64	91.115	ENSELUG00000001132	eif5b	58	91.115	Esox_lucius
ENSKMAG00000004325	eif5b	74	77.237	ENSGMOG00000002031	eif5b	69	79.682	Gadus_morhua
ENSKMAG00000004325	eif5b	90	80.957	ENSGACG00000010536	eif5b	89	90.123	Gasterosteus_aculeatus
ENSKMAG00000004325	eif5b	52	87.942	ENSGAGG00000022242	-	92	87.942	Gopherus_agassizii
ENSKMAG00000004325	eif5b	100	85.182	ENSHBUG00000023319	eif5b	100	84.411	Haplochromis_burtoni
ENSKMAG00000004325	eif5b	100	79.735	ENSHCOG00000002807	eif5b	100	78.081	Hippocampus_comes
ENSKMAG00000004325	eif5b	100	73.585	ENSIPUG00000020910	eif5b	76	83.616	Ictalurus_punctatus
ENSKMAG00000004325	eif5b	82	81.966	ENSLBEG00000027090	eif5b	96	76.836	Labrus_bergylta
ENSKMAG00000004325	eif5b	99	66.908	ENSLACG00000011688	eif5b	73	77.679	Latimeria_chalumnae
ENSKMAG00000004325	eif5b	100	84.323	ENSMAMG00000022568	eif5b	100	83.498	Mastacembelus_armatus
ENSKMAG00000004325	eif5b	100	85.112	ENSMZEG00005012696	eif5b	100	84.590	Maylandia_zebra
ENSKMAG00000004325	eif5b	89	67.407	ENSMODG00000001387	-	52	87.781	Monodelphis_domestica
ENSKMAG00000004325	eif5b	100	83.209	ENSMALG00000005862	eif5b	100	83.788	Monopterus_albus
ENSKMAG00000004325	eif5b	78	86.364	ENSMEUG00000007080	-	62	86.364	Notamacropus_eugenii
ENSKMAG00000004325	eif5b	100	84.590	ENSONIG00000018749	eif5b	100	84.010	Oreochromis_niloticus
ENSKMAG00000004325	eif5b	99	67.938	ENSOCUG00000021154	-	73	77.232	Oryctolagus_cuniculus
ENSKMAG00000004325	eif5b	100	81.780	ENSORLG00000001525	eif5b	100	81.531	Oryzias_latipes
ENSKMAG00000004325	eif5b	100	82.363	ENSORLG00020005327	eif5b	100	81.614	Oryzias_latipes_hni
ENSKMAG00000004325	eif5b	100	82.030	ENSORLG00015008949	eif5b	100	81.448	Oryzias_latipes_hsok
ENSKMAG00000004325	eif5b	66	89.407	ENSOMEG00000016539	eif5b	99	89.155	Oryzias_melastigma
ENSKMAG00000004325	eif5b	100	71.707	ENSPKIG00000011133	eif5b	73	83.408	Paramormyrops_kingsleyae
ENSKMAG00000004325	eif5b	58	77.809	ENSPSIG00000014914	-	57	89.583	Pelodiscus_sinensis
ENSKMAG00000004325	eif5b	74	66.593	ENSPMAG00000004508	eif5b	52	76.367	Petromyzon_marinus
ENSKMAG00000004325	eif5b	62	91.033	ENSPFOG00000007543	eif5b	100	90.761	Poecilia_formosa
ENSKMAG00000004325	eif5b	100	83.943	ENSPLAG00000015913	eif5b	100	82.612	Poecilia_latipinna
ENSKMAG00000004325	eif5b	100	84.167	ENSPMEG00000006712	eif5b	100	82.199	Poecilia_mexicana
ENSKMAG00000004325	eif5b	66	72.762	ENSPCAG00000007829	-	65	72.956	Procavia_capensis
ENSKMAG00000004325	eif5b	99	65.826	ENSPCOG00000019508	-	99	85.484	Propithecus_coquereli
ENSKMAG00000004325	eif5b	83	88.571	ENSPVAG00000006592	-	56	83.146	Pteropus_vampyrus
ENSKMAG00000004325	eif5b	92	86.720	ENSPNYG00000021051	eif5b	89	84.158	Pundamilia_nyererei
ENSKMAG00000004325	eif5b	74	84.211	ENSPNAG00000023852	eif5b	100	74.672	Pygocentrus_nattereri
ENSKMAG00000004325	eif5b	52	91.814	ENSSFOG00015000594	eif5b	82	79.482	Scleropages_formosus
ENSKMAG00000004325	eif5b	85	76.331	ENSSMAG00000000045	eif5b	78	83.436	Scophthalmus_maximus
ENSKMAG00000004325	eif5b	70	89.820	ENSSDUG00000005847	eif5b	80	89.189	Seriola_dumerili
ENSKMAG00000004325	eif5b	70	89.341	ENSSLDG00000013738	eif5b	81	88.821	Seriola_lalandi_dorsalis
ENSKMAG00000004325	eif5b	84	72.997	ENSSPAG00000005335	eif5b	80	80.098	Stegastes_partitus
ENSKMAG00000004325	eif5b	68	82.742	ENSTRUG00000007772	eif5b	79	81.863	Takifugu_rubripes
ENSKMAG00000004325	eif5b	76	78.834	ENSTNIG00000006580	eif5b	95	81.576	Tetraodon_nigroviridis
ENSKMAG00000004325	eif5b	65	92.576	ENSTBEG00000009133	-	56	92.576	Tupaia_belangeri
ENSKMAG00000004325	eif5b	100	64.421	ENSXETG00000019377	eif5b	53	86.334	Xenopus_tropicalis
ENSKMAG00000004325	eif5b	74	84.719	ENSXCOG00000016681	eif5b	94	85.147	Xiphophorus_couchianus
ENSKMAG00000004325	eif5b	74	85.023	ENSXMAG00000001002	eif5b	94	85.455	Xiphophorus_maculatus