EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000004457 (Gene tree)
Gene ID: 108242235
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 44191 bases
Position: chrLWHD01000098.1:161850-206040
Accession: 108242235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005866	SHQ1	PF04925.15	4.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000005968	-	2926	XM_017426970	ENSKMAP00000005866	587 (aa)	XP_017282459	UPI0007F8B0A8

Gene Model

Click here to download ENSKMAG00000004457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004457	shq1	91	53.996	ENSG00000144736	SHQ1	100	70.000	Homo_sapiens
ENSKMAG00000004457	shq1	100	72.995	ENSAPOG00000000397	shq1	100	74.304	Acanthochromis_polyacanthus
ENSKMAG00000004457	shq1	91	54.856	ENSAMEG00000015140	SHQ1	96	54.317	Ailuropoda_melanoleuca
ENSKMAG00000004457	shq1	100	73.641	ENSACIG00000021249	shq1	100	74.135	Amphilophus_citrinellus
ENSKMAG00000004457	shq1	100	75.285	ENSAOCG00000023311	shq1	100	74.797	Amphiprion_ocellaris
ENSKMAG00000004457	shq1	100	75.574	ENSAPEG00000021686	shq1	100	75.246	Amphiprion_percula
ENSKMAG00000004457	shq1	99	72.833	ENSATEG00000008475	shq1	99	72.500	Anabas_testudineus
ENSKMAG00000004457	shq1	74	57.175	ENSAPLG00000013926	SHQ1	87	57.753	Anas_platyrhynchos
ENSKMAG00000004457	shq1	72	61.806	ENSACAG00000014809	SHQ1	82	53.405	Anolis_carolinensis
ENSKMAG00000004457	shq1	91	53.654	ENSANAG00000029241	SHQ1	96	52.305	Aotus_nancymaae
ENSKMAG00000004457	shq1	91	40.614	ENSANAG00000030500	-	72	45.606	Aotus_nancymaae
ENSKMAG00000004457	shq1	100	71.405	ENSACLG00000023077	shq1	100	68.454	Astatotilapia_calliptera
ENSKMAG00000004457	shq1	91	52.931	ENSBTAG00000005436	SHQ1	96	54.240	Bos_taurus
ENSKMAG00000004457	shq1	91	52.076	ENSCJAG00000015131	SHQ1	96	52.827	Callithrix_jacchus
ENSKMAG00000004457	shq1	76	59.649	ENSCAFG00000006434	SHQ1	75	61.872	Canis_familiaris
ENSKMAG00000004457	shq1	76	59.868	ENSCAFG00020016743	SHQ1	75	62.100	Canis_lupus_dingo
ENSKMAG00000004457	shq1	91	53.131	ENSCHIG00000012271	SHQ1	87	53.131	Capra_hircus
ENSKMAG00000004457	shq1	95	47.627	ENSTSYG00000014439	SHQ1	77	57.336	Carlito_syrichta
ENSKMAG00000004457	shq1	83	48.515	ENSCAPG00000009343	SHQ1	92	59.748	Cavia_aperea
ENSKMAG00000004457	shq1	91	53.274	ENSCPOG00000011443	SHQ1	96	53.451	Cavia_porcellus
ENSKMAG00000004457	shq1	91	42.599	ENSCCAG00000036087	-	96	41.261	Cebus_capucinus
ENSKMAG00000004457	shq1	91	46.881	ENSCCAG00000027080	SHQ1	96	45.893	Cebus_capucinus
ENSKMAG00000004457	shq1	91	53.739	ENSCATG00000041238	SHQ1	96	54.643	Cercocebus_atys
ENSKMAG00000004457	shq1	94	52.522	ENSCLAG00000004206	SHQ1	97	54.433	Chinchilla_lanigera
ENSKMAG00000004457	shq1	76	50.000	ENSCSAG00000011514	SHQ1	95	51.168	Chlorocebus_sabaeus
ENSKMAG00000004457	shq1	74	59.641	ENSCPBG00000006441	SHQ1	71	61.276	Chrysemys_picta_bellii
ENSKMAG00000004457	shq1	67	43.797	ENSCING00000008013	-	95	42.694	Ciona_intestinalis
ENSKMAG00000004457	shq1	66	41.327	ENSCSAVG00000002332	-	98	40.416	Ciona_savignyi
ENSKMAG00000004457	shq1	91	53.913	ENSCANG00000039295	SHQ1	97	54.643	Colobus_angolensis_palliatus
ENSKMAG00000004457	shq1	74	60.586	ENSCGRG00001012583	Shq1	78	60.225	Cricetulus_griseus_chok1gshd
ENSKMAG00000004457	shq1	74	60.586	ENSCGRG00000009849	Shq1	78	60.225	Cricetulus_griseus_crigri
ENSKMAG00000004457	shq1	99	67.476	ENSCSEG00000007829	shq1	99	67.476	Cynoglossus_semilaevis
ENSKMAG00000004457	shq1	99	73.684	ENSCVAG00000020049	shq1	99	73.469	Cyprinodon_variegatus
ENSKMAG00000004457	shq1	99	54.515	ENSDARG00000058522	shq1	96	53.445	Danio_rerio
ENSKMAG00000004457	shq1	91	53.805	ENSDNOG00000033937	SHQ1	76	61.937	Dasypus_novemcinctus
ENSKMAG00000004457	shq1	74	53.604	ENSETEG00000005766	SHQ1	96	47.594	Echinops_telfairi
ENSKMAG00000004457	shq1	63	46.257	ENSEBUG00000005445	shq1	78	47.839	Eptatretus_burgeri
ENSKMAG00000004457	shq1	91	52.867	ENSEASG00005002237	SHQ1	96	54.301	Equus_asinus_asinus
ENSKMAG00000004457	shq1	91	53.226	ENSECAG00000015673	SHQ1	94	54.659	Equus_caballus
ENSKMAG00000004457	shq1	75	61.247	ENSEEUG00000010568	SHQ1	96	52.827	Erinaceus_europaeus
ENSKMAG00000004457	shq1	98	63.283	ENSELUG00000003476	shq1	99	62.687	Esox_lucius
ENSKMAG00000004457	shq1	96	51.613	ENSFCAG00000012781	SHQ1	76	61.644	Felis_catus
ENSKMAG00000004457	shq1	98	51.299	ENSFALG00000013428	SHQ1	72	61.124	Ficedula_albicollis
ENSKMAG00000004457	shq1	95	48.567	ENSFDAG00000005595	SHQ1	67	60.502	Fukomys_damarensis
ENSKMAG00000004457	shq1	98	71.066	ENSFHEG00000017552	shq1	100	71.088	Fundulus_heteroclitus
ENSKMAG00000004457	shq1	66	74.103	ENSGMOG00000007350	shq1	100	74.359	Gadus_morhua
ENSKMAG00000004457	shq1	98	50.165	ENSGALG00000007798	SHQ1	99	50.330	Gallus_gallus
ENSKMAG00000004457	shq1	66	78.718	ENSGACG00000011797	shq1	100	78.462	Gasterosteus_aculeatus
ENSKMAG00000004457	shq1	91	53.119	ENSGGOG00000034818	SHQ1	96	52.650	Gorilla_gorilla
ENSKMAG00000004457	shq1	100	71.523	ENSHBUG00000010857	shq1	100	71.689	Haplochromis_burtoni
ENSKMAG00000004457	shq1	91	51.483	ENSHGLG00000003637	SHQ1	68	60.135	Heterocephalus_glaber_female
ENSKMAG00000004457	shq1	91	51.664	ENSHGLG00100011957	SHQ1	69	60.135	Heterocephalus_glaber_male
ENSKMAG00000004457	shq1	100	65.313	ENSHCOG00000010799	shq1	100	65.541	Hippocampus_comes
ENSKMAG00000004457	shq1	95	54.804	ENSIPUG00000001247	shq1	89	55.963	Ictalurus_punctatus
ENSKMAG00000004457	shq1	91	54.396	ENSSTOG00000010043	SHQ1	97	53.442	Ictidomys_tridecemlineatus
ENSKMAG00000004457	shq1	73	61.416	ENSJJAG00000017611	Shq1	76	61.416	Jaculus_jaculus
ENSKMAG00000004457	shq1	74	63.839	ENSLACG00000014243	SHQ1	67	64.206	Latimeria_chalumnae
ENSKMAG00000004457	shq1	99	54.173	ENSLOCG00000009970	shq1	99	54.690	Lepisosteus_oculatus
ENSKMAG00000004457	shq1	91	54.087	ENSMFAG00000039148	SHQ1	96	54.821	Macaca_fascicularis
ENSKMAG00000004457	shq1	91	39.636	ENSMFAG00000037396	-	95	38.980	Macaca_fascicularis
ENSKMAG00000004457	shq1	83	52.372	ENSMMUG00000009571	SHQ1	92	53.320	Macaca_mulatta
ENSKMAG00000004457	shq1	91	39.636	ENSMMUG00000021761	-	95	38.980	Macaca_mulatta
ENSKMAG00000004457	shq1	91	54.087	ENSMNEG00000032667	SHQ1	96	54.821	Macaca_nemestrina
ENSKMAG00000004457	shq1	91	53.125	ENSMLEG00000038493	SHQ1	96	53.357	Mandrillus_leucophaeus
ENSKMAG00000004457	shq1	99	71.567	ENSMAMG00000023432	shq1	96	72.123	Mastacembelus_armatus
ENSKMAG00000004457	shq1	100	71.689	ENSMZEG00005008649	shq1	100	71.854	Maylandia_zebra
ENSKMAG00000004457	shq1	98	49.919	ENSMGAG00000009640	SHQ1	99	51.419	Meleagris_gallopavo
ENSKMAG00000004457	shq1	75	60.491	ENSMAUG00000022030	Shq1	78	60.135	Mesocricetus_auratus
ENSKMAG00000004457	shq1	91	51.379	ENSMICG00000009224	SHQ1	95	49.625	Microcebus_murinus
ENSKMAG00000004457	shq1	75	61.074	ENSMOCG00000017836	Shq1	78	60.674	Microtus_ochrogaster
ENSKMAG00000004457	shq1	99	67.960	ENSMMOG00000010569	shq1	100	67.905	Mola_mola
ENSKMAG00000004457	shq1	79	56.701	ENSMODG00000003926	SHQ1	78	58.636	Monodelphis_domestica
ENSKMAG00000004457	shq1	99	73.729	ENSMALG00000008870	shq1	98	73.514	Monopterus_albus
ENSKMAG00000004457	shq1	76	59.031	MGP_CAROLIEiJ_G0028689	Shq1	78	60.225	Mus_caroli
ENSKMAG00000004457	shq1	95	52.069	ENSMUSG00000035378	Shq1	76	61.276	Mus_musculus
ENSKMAG00000004457	shq1	95	51.300	MGP_PahariEiJ_G0022440	Shq1	76	61.731	Mus_pahari
ENSKMAG00000004457	shq1	95	52.931	MGP_SPRETEiJ_G0029717	Shq1	76	61.276	Mus_spretus
ENSKMAG00000004457	shq1	91	53.597	ENSMPUG00000017006	SHQ1	94	53.058	Mustela_putorius_furo
ENSKMAG00000004457	shq1	83	51.167	ENSMLUG00000013539	SHQ1	74	60.358	Myotis_lucifugus
ENSKMAG00000004457	shq1	89	46.595	ENSNGAG00000023317	Shq1	76	53.846	Nannospalax_galili
ENSKMAG00000004457	shq1	85	68.350	ENSNBRG00000024004	shq1	100	68.544	Neolamprologus_brichardi
ENSKMAG00000004457	shq1	91	54.286	ENSNLEG00000002731	SHQ1	96	54.286	Nomascus_leucogenys
ENSKMAG00000004457	shq1	69	58.333	ENSMEUG00000009350	-	70	58.333	Notamacropus_eugenii
ENSKMAG00000004457	shq1	94	52.135	ENSODEG00000009192	SHQ1	93	58.898	Octodon_degus
ENSKMAG00000004457	shq1	99	71.523	ENSONIG00000020264	shq1	100	71.854	Oreochromis_niloticus
ENSKMAG00000004457	shq1	91	53.357	ENSOCUG00000016695	SHQ1	96	53.996	Oryctolagus_cuniculus
ENSKMAG00000004457	shq1	95	68.829	ENSORLG00000023538	shq1	92	70.802	Oryzias_latipes
ENSKMAG00000004457	shq1	99	67.406	ENSORLG00020003697	shq1	92	69.759	Oryzias_latipes_hni
ENSKMAG00000004457	shq1	99	66.041	ENSORLG00015021040	shq1	92	69.847	Oryzias_latipes_hsok
ENSKMAG00000004457	shq1	96	69.697	ENSOMEG00000001225	shq1	93	69.573	Oryzias_melastigma
ENSKMAG00000004457	shq1	91	54.078	ENSOGAG00000003898	SHQ1	78	60.850	Otolemur_garnettii
ENSKMAG00000004457	shq1	75	59.956	ENSOARG00000009547	SHQ1	96	52.669	Ovis_aries
ENSKMAG00000004457	shq1	91	53.996	ENSPPAG00000027714	SHQ1	96	53.274	Pan_paniscus
ENSKMAG00000004457	shq1	91	39.305	ENSPPAG00000043263	-	95	39.020	Pan_paniscus
ENSKMAG00000004457	shq1	95	52.577	ENSPPRG00000004769	SHQ1	96	51.971	Panthera_pardus
ENSKMAG00000004457	shq1	96	49.488	ENSPTIG00000011478	SHQ1	96	49.192	Panthera_tigris_altaica
ENSKMAG00000004457	shq1	91	39.042	ENSPTRG00000048303	-	95	38.657	Pan_troglodytes
ENSKMAG00000004457	shq1	91	54.174	ENSPTRG00000015106	SHQ1	96	53.451	Pan_troglodytes
ENSKMAG00000004457	shq1	91	53.391	ENSPANG00000002881	SHQ1	96	54.643	Papio_anubis
ENSKMAG00000004457	shq1	98	56.588	ENSPKIG00000021517	shq1	98	56.947	Paramormyrops_kingsleyae
ENSKMAG00000004457	shq1	74	60.626	ENSPSIG00000005536	SHQ1	72	60.762	Pelodiscus_sinensis
ENSKMAG00000004457	shq1	98	61.054	ENSPMGG00000008838	shq1	98	61.263	Periophthalmus_magnuspinnatus
ENSKMAG00000004457	shq1	95	52.686	ENSPEMG00000000251	Shq1	76	60.592	Peromyscus_maniculatus_bairdii
ENSKMAG00000004457	shq1	73	56.881	ENSPMAG00000005372	shq1	94	59.091	Petromyzon_marinus
ENSKMAG00000004457	shq1	91	73.234	ENSPFOG00000003118	shq1	97	72.913	Poecilia_formosa
ENSKMAG00000004457	shq1	76	70.759	ENSPMEG00000011076	shq1	97	70.379	Poecilia_mexicana
ENSKMAG00000004457	shq1	84	71.487	ENSPREG00000000591	shq1	92	71.341	Poecilia_reticulata
ENSKMAG00000004457	shq1	91	53.819	ENSPPYG00000013717	SHQ1	96	53.097	Pongo_abelii
ENSKMAG00000004457	shq1	70	61.190	ENSPCAG00000009035	SHQ1	78	60.762	Procavia_capensis
ENSKMAG00000004457	shq1	91	52.763	ENSPCOG00000008415	SHQ1	96	53.036	Propithecus_coquereli
ENSKMAG00000004457	shq1	91	52.594	ENSPVAG00000017392	SHQ1	77	61.036	Pteropus_vampyrus
ENSKMAG00000004457	shq1	100	71.240	ENSPNYG00000003878	shq1	100	71.570	Pundamilia_nyererei
ENSKMAG00000004457	shq1	73	66.355	ENSPNAG00000026840	shq1	89	56.937	Pygocentrus_nattereri
ENSKMAG00000004457	shq1	75	59.020	ENSRNOG00000005433	Shq1	72	60.364	Rattus_norvegicus
ENSKMAG00000004457	shq1	91	52.465	ENSRBIG00000026280	SHQ1	97	53.165	Rhinopithecus_bieti
ENSKMAG00000004457	shq1	91	54.435	ENSRROG00000034126	SHQ1	97	55.179	Rhinopithecus_roxellana
ENSKMAG00000004457	shq1	91	46.875	ENSSBOG00000021038	SHQ1	96	47.857	Saimiri_boliviensis_boliviensis
ENSKMAG00000004457	shq1	73	61.048	ENSSHAG00000015077	SHQ1	77	61.048	Sarcophilus_harrisii
ENSKMAG00000004457	shq1	99	57.432	ENSSFOG00015016241	shq1	100	56.975	Scleropages_formosus
ENSKMAG00000004457	shq1	100	72.085	ENSSMAG00000016151	shq1	100	71.901	Scophthalmus_maximus
ENSKMAG00000004457	shq1	100	74.715	ENSSDUG00000011986	shq1	100	74.593	Seriola_dumerili
ENSKMAG00000004457	shq1	100	74.098	ENSSLDG00000013908	shq1	100	73.443	Seriola_lalandi_dorsalis
ENSKMAG00000004457	shq1	92	45.648	ENSSARG00000007119	SHQ1	60	58.892	Sorex_araneus
ENSKMAG00000004457	shq1	83	50.000	ENSSPUG00000011526	-	87	49.592	Sphenodon_punctatus
ENSKMAG00000004457	shq1	91	51.478	ENSSSCG00000011518	SHQ1	96	53.309	Sus_scrofa
ENSKMAG00000004457	shq1	70	62.530	ENSTGUG00000009933	SHQ1	76	62.132	Taeniopygia_guttata
ENSKMAG00000004457	shq1	99	64.346	ENSTRUG00000009446	shq1	99	64.686	Takifugu_rubripes
ENSKMAG00000004457	shq1	70	72.155	ENSTNIG00000007354	shq1	96	71.396	Tetraodon_nigroviridis
ENSKMAG00000004457	shq1	71	72.340	ENSTBEG00000011295	SHQ1	76	72.340	Tupaia_belangeri
ENSKMAG00000004457	shq1	91	52.509	ENSTTRG00000005320	SHQ1	96	52.398	Tursiops_truncatus
ENSKMAG00000004457	shq1	91	54.296	ENSUMAG00000024031	SHQ1	95	53.931	Ursus_maritimus
ENSKMAG00000004457	shq1	72	50.441	ENSVPAG00000004880	SHQ1	80	50.572	Vicugna_pacos
ENSKMAG00000004457	shq1	96	51.361	ENSVVUG00000013906	SHQ1	75	61.416	Vulpes_vulpes
ENSKMAG00000004457	shq1	99	49.752	ENSXETG00000032215	shq1	71	59.353	Xenopus_tropicalis