EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000004528 (Gene tree)
Gene ID: 108244544
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3833 bases
Position: chrLWHD01000144.1:1071418-1075250
Accession: 108244544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005945	RRM_1	PF00076.22	1.8e-28	1	2
ENSKMAP00000005945	RRM_1	PF00076.22	1.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000006049	-	1491	XM_017430846	ENSKMAP00000005945	419 (aa)	XP_017286335	UPI0007F9136C

Gene Model

Click here to download ENSKMAG00000004528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000004528	grsf1	74	44.611	ENSKMAG00000018802	hnrnph1	80	44.012
ENSKMAG00000004528	grsf1	73	53.333	ENSKMAG00000020517	hnrnph3	72	53.333
ENSKMAG00000004528	grsf1	75	30.317	ENSKMAG00000013704	rbm12b	68	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004528	grsf1	100	60.900	ENSAPOG00000012487	grsf1	99	60.900	Acanthochromis_polyacanthus
ENSKMAG00000004528	grsf1	100	57.007	ENSACIG00000005871	grsf1	97	57.488	Amphilophus_citrinellus
ENSKMAG00000004528	grsf1	100	59.574	ENSAOCG00000017462	-	99	59.574	Amphiprion_ocellaris
ENSKMAG00000004528	grsf1	100	59.574	ENSAPEG00000007240	-	99	59.574	Amphiprion_percula
ENSKMAG00000004528	grsf1	100	55.450	ENSATEG00000007185	grsf1	100	55.450	Anabas_testudineus
ENSKMAG00000004528	grsf1	100	60.000	ENSACLG00000003685	-	99	60.000	Astatotilapia_calliptera
ENSKMAG00000004528	grsf1	99	47.812	ENSAMXG00000012270	grsf1	99	47.812	Astyanax_mexicanus
ENSKMAG00000004528	grsf1	99	53.049	ENSCSEG00000019209	-	100	52.853	Cynoglossus_semilaevis
ENSKMAG00000004528	grsf1	100	60.095	ENSCVAG00000004476	grsf1	100	59.145	Cyprinodon_variegatus
ENSKMAG00000004528	grsf1	78	50.760	ENSDARG00000053021	grsf1	77	50.765	Danio_rerio
ENSKMAG00000004528	grsf1	100	48.826	ENSFHEG00000013358	-	99	49.061	Fundulus_heteroclitus
ENSKMAG00000004528	grsf1	72	64.516	ENSGMOG00000014047	grsf1	78	65.909	Gadus_morhua
ENSKMAG00000004528	grsf1	99	59.479	ENSGAFG00000004496	grsf1	99	58.294	Gambusia_affinis
ENSKMAG00000004528	grsf1	73	61.420	ENSGACG00000014447	grsf1	98	61.420	Gasterosteus_aculeatus
ENSKMAG00000004528	grsf1	100	60.427	ENSHBUG00000006284	grsf1	99	60.427	Haplochromis_burtoni
ENSKMAG00000004528	grsf1	99	51.196	ENSHCOG00000007715	-	99	50.000	Hippocampus_comes
ENSKMAG00000004528	grsf1	76	51.097	ENSIPUG00000010533	grsf1	79	51.411	Ictalurus_punctatus
ENSKMAG00000004528	grsf1	74	51.582	ENSLBEG00000018100	grsf1	98	51.582	Labrus_bergylta
ENSKMAG00000004528	grsf1	99	57.279	ENSMAMG00000002627	grsf1	99	57.279	Mastacembelus_armatus
ENSKMAG00000004528	grsf1	100	60.000	ENSMZEG00005020633	-	99	60.000	Maylandia_zebra
ENSKMAG00000004528	grsf1	95	53.418	ENSMMOG00000014231	grsf1	99	52.696	Mola_mola
ENSKMAG00000004528	grsf1	97	56.667	ENSMALG00000000251	grsf1	97	55.476	Monopterus_albus
ENSKMAG00000004528	grsf1	99	60.287	ENSNBRG00000017774	grsf1	96	60.287	Neolamprologus_brichardi
ENSKMAG00000004528	grsf1	100	61.882	ENSONIG00000014119	grsf1	99	61.412	Oreochromis_niloticus
ENSKMAG00000004528	grsf1	87	62.060	ENSORLG00000030211	grsf1	90	62.060	Oryzias_latipes
ENSKMAG00000004528	grsf1	87	60.929	ENSORLG00020014383	grsf1	90	62.022	Oryzias_latipes_hni
ENSKMAG00000004528	grsf1	87	60.434	ENSORLG00015006520	grsf1	91	62.331	Oryzias_latipes_hsok
ENSKMAG00000004528	grsf1	88	62.234	ENSOMEG00000009181	grsf1	96	61.518	Oryzias_melastigma
ENSKMAG00000004528	grsf1	81	51.453	ENSPKIG00000019432	grsf1	82	51.453	Paramormyrops_kingsleyae
ENSKMAG00000004528	grsf1	77	61.446	ENSPMGG00000013654	grsf1	91	57.349	Periophthalmus_magnuspinnatus
ENSKMAG00000004528	grsf1	99	57.907	ENSPFOG00000006122	grsf1	99	57.907	Poecilia_formosa
ENSKMAG00000004528	grsf1	99	58.451	ENSPLAG00000020977	grsf1	99	58.451	Poecilia_latipinna
ENSKMAG00000004528	grsf1	99	58.140	ENSPMEG00000012485	grsf1	99	58.140	Poecilia_mexicana
ENSKMAG00000004528	grsf1	99	57.477	ENSPREG00000013383	grsf1	99	57.710	Poecilia_reticulata
ENSKMAG00000004528	grsf1	100	60.664	ENSPNYG00000005379	grsf1	99	60.664	Pundamilia_nyererei
ENSKMAG00000004528	grsf1	78	53.495	ENSPNAG00000014912	grsf1	87	50.135	Pygocentrus_nattereri
ENSKMAG00000004528	grsf1	79	45.482	ENSSFOG00015014620	grsf1	83	45.482	Scleropages_formosus
ENSKMAG00000004528	grsf1	79	59.940	ENSSMAG00000014181	grsf1	71	59.940	Scophthalmus_maximus
ENSKMAG00000004528	grsf1	100	55.269	ENSSDUG00000009397	-	98	62.462	Seriola_dumerili
ENSKMAG00000004528	grsf1	100	55.529	ENSSLDG00000025494	grsf1	98	59.270	Seriola_lalandi_dorsalis
ENSKMAG00000004528	grsf1	100	56.398	ENSSPAG00000023296	grsf1	99	54.524	Stegastes_partitus
ENSKMAG00000004528	grsf1	90	55.236	ENSTRUG00000015354	grsf1	100	52.257	Takifugu_rubripes
ENSKMAG00000004528	grsf1	80	56.250	ENSTNIG00000015350	-	99	56.563	Tetraodon_nigroviridis
ENSKMAG00000004528	grsf1	99	56.905	ENSXMAG00000029710	grsf1	100	56.190	Xiphophorus_maculatus