EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000004532 (Gene tree)
Gene ID: 108231839
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 11252 bases
Position: chrLWHD01000013.1:6291071-6302322
Accession: 108231839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000005948	SAP	PF02037.27	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000006052	-	4064	XM_017409191	ENSKMAP00000005948	818 (aa)	XP_017264680	UPI0007F91C39

Gene Model

Click here to download ENSKMAG00000004532's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000004532	hnrnpub	74	34.539	ENSKMAG00000003651	si:ch211-107m4.1	89	33.388
ENSKMAG00000004532	hnrnpub	74	45.201	ENSKMAG00000009438	HNRNPUL1	76	45.369

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004532	hnrnpub	88	59.155	ENSG00000153187	HNRNPU	99	65.000	Homo_sapiens
ENSKMAG00000004532	hnrnpub	100	84.024	ENSAPOG00000017400	hnrnpub	100	81.785	Acanthochromis_polyacanthus
ENSKMAG00000004532	hnrnpub	88	59.155	ENSAMEG00000009145	HNRNPU	79	63.077	Ailuropoda_melanoleuca
ENSKMAG00000004532	hnrnpub	100	75.761	ENSACIG00000012138	hnrnpub	96	83.740	Amphilophus_citrinellus
ENSKMAG00000004532	hnrnpub	100	84.512	ENSAOCG00000015843	hnrnpub	100	82.152	Amphiprion_ocellaris
ENSKMAG00000004532	hnrnpub	100	84.512	ENSAPEG00000014679	hnrnpub	100	82.152	Amphiprion_percula
ENSKMAG00000004532	hnrnpub	98	83.807	ENSATEG00000016178	hnrnpub	97	81.459	Anabas_testudineus
ENSKMAG00000004532	hnrnpub	87	69.388	ENSACAG00000004511	HNRNPU	79	63.333	Anolis_carolinensis
ENSKMAG00000004532	hnrnpub	80	56.012	ENSANAG00000033895	-	95	53.064	Aotus_nancymaae
ENSKMAG00000004532	hnrnpub	100	82.274	ENSACLG00000008165	hnrnpub	100	82.274	Astatotilapia_calliptera
ENSKMAG00000004532	hnrnpub	88	59.155	ENSBTAG00000007606	HNRNPU	81	63.077	Bos_taurus
ENSKMAG00000004532	hnrnpub	88	59.155	ENSCJAG00000016914	HNRNPU	95	53.455	Callithrix_jacchus
ENSKMAG00000004532	hnrnpub	80	55.255	ENSCAFG00020000918	HNRNPU	75	55.147	Canis_lupus_dingo
ENSKMAG00000004532	hnrnpub	80	54.955	ENSCHIG00000004900	HNRNPU	75	55.000	Capra_hircus
ENSKMAG00000004532	hnrnpub	88	60.563	ENSCPOG00000011887	HNRNPU	81	64.615	Cavia_porcellus
ENSKMAG00000004532	hnrnpub	88	59.155	ENSCCAG00000037859	-	95	52.934	Cebus_capucinus
ENSKMAG00000004532	hnrnpub	89	58.108	ENSCATG00000035273	HNRNPU	95	53.064	Cercocebus_atys
ENSKMAG00000004532	hnrnpub	88	60.563	ENSCLAG00000007100	HNRNPU	81	64.615	Chinchilla_lanigera
ENSKMAG00000004532	hnrnpub	80	56.012	ENSCSAG00000009219	HNRNPU	75	54.665	Chlorocebus_sabaeus
ENSKMAG00000004532	hnrnpub	85	78.261	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSKMAG00000004532	hnrnpub	92	58.075	ENSCPBG00000009415	HNRNPU	79	66.667	Chrysemys_picta_bellii
ENSKMAG00000004532	hnrnpub	89	58.108	ENSCANG00000022780	HNRNPU	95	52.051	Colobus_angolensis_palliatus
ENSKMAG00000004532	hnrnpub	89	59.459	ENSCGRG00001020525	Hnrnpu	77	83.721	Cricetulus_griseus_chok1gshd
ENSKMAG00000004532	hnrnpub	100	74.675	ENSCSEG00000010804	hnrnpub	100	76.100	Cynoglossus_semilaevis
ENSKMAG00000004532	hnrnpub	87	93.617	ENSCVAG00000004280	hnrnpub	100	74.661	Cyprinodon_variegatus
ENSKMAG00000004532	hnrnpub	100	62.545	ENSDARG00000004735	hnrnpub	100	60.454	Danio_rerio
ENSKMAG00000004532	hnrnpub	100	60.219	ENSDARG00000015206	hnrnpua	100	58.987	Danio_rerio
ENSKMAG00000004532	hnrnpub	99	50.299	ENSDNOG00000000215	HNRNPU	86	78.261	Dasypus_novemcinctus
ENSKMAG00000004532	hnrnpub	80	55.105	ENSDORG00000015491	Hnrnpu	74	55.860	Dipodomys_ordii
ENSKMAG00000004532	hnrnpub	95	54.505	ENSETEG00000014565	HNRNPU	80	63.077	Echinops_telfairi
ENSKMAG00000004532	hnrnpub	81	54.801	ENSEASG00005003017	HNRNPU	75	55.147	Equus_asinus_asinus
ENSKMAG00000004532	hnrnpub	81	54.801	ENSECAG00000007955	HNRNPU	75	55.147	Equus_caballus
ENSKMAG00000004532	hnrnpub	100	71.228	ENSELUG00000010733	hnrnpub	100	70.396	Esox_lucius
ENSKMAG00000004532	hnrnpub	88	69.258	ENSELUG00000011966	hnrnpua	95	66.667	Esox_lucius
ENSKMAG00000004532	hnrnpub	80	55.105	ENSFCAG00000002156	HNRNPU	74	55.147	Felis_catus
ENSKMAG00000004532	hnrnpub	94	54.493	ENSFDAG00000006026	HNRNPU	99	66.129	Fukomys_damarensis
ENSKMAG00000004532	hnrnpub	100	81.039	ENSFHEG00000022639	hnrnpub	100	81.643	Fundulus_heteroclitus
ENSKMAG00000004532	hnrnpub	100	69.385	ENSGMOG00000001755	hnrnpub	99	69.421	Gadus_morhua
ENSKMAG00000004532	hnrnpub	71	78.261	ENSGALG00000010671	HNRNPU	77	78.261	Gallus_gallus
ENSKMAG00000004532	hnrnpub	84	86.083	ENSGAFG00000009369	hnrnpub	100	81.591	Gambusia_affinis
ENSKMAG00000004532	hnrnpub	100	72.738	ENSGACG00000004679	hnrnpub	99	72.706	Gasterosteus_aculeatus
ENSKMAG00000004532	hnrnpub	88	59.155	ENSGGOG00000004061	HNRNPU	95	53.325	Gorilla_gorilla
ENSKMAG00000004532	hnrnpub	100	82.641	ENSHBUG00000012290	hnrnpub	100	82.641	Haplochromis_burtoni
ENSKMAG00000004532	hnrnpub	88	60.563	ENSHGLG00000010594	-	82	64.615	Heterocephalus_glaber_female
ENSKMAG00000004532	hnrnpub	85	80.435	ENSHGLG00100015093	HNRNPU	99	80.435	Heterocephalus_glaber_male
ENSKMAG00000004532	hnrnpub	100	72.361	ENSHCOG00000020091	hnrnpub	100	71.886	Hippocampus_comes
ENSKMAG00000004532	hnrnpub	77	93.617	ENSIPUG00000007749	hnrnpu	94	77.049	Ictalurus_punctatus
ENSKMAG00000004532	hnrnpub	99	47.368	ENSJJAG00000011371	Hnrnpu	79	83.721	Jaculus_jaculus
ENSKMAG00000004532	hnrnpub	84	86.083	ENSLBEG00000022520	hnrnpub	100	80.532	Labrus_bergylta
ENSKMAG00000004532	hnrnpub	99	46.445	ENSLACG00000017463	HNRNPU	97	53.523	Latimeria_chalumnae
ENSKMAG00000004532	hnrnpub	88	93.617	ENSLOCG00000016652	hnrnpua	99	63.604	Lepisosteus_oculatus
ENSKMAG00000004532	hnrnpub	95	55.105	ENSLAFG00000021377	HNRNPU	81	63.077	Loxodonta_africana
ENSKMAG00000004532	hnrnpub	89	58.108	ENSMFAG00000037308	HNRNPU	95	53.064	Macaca_fascicularis
ENSKMAG00000004532	hnrnpub	80	56.012	ENSMMUG00000021098	HNRNPU	76	54.665	Macaca_mulatta
ENSKMAG00000004532	hnrnpub	89	58.108	ENSMNEG00000043645	HNRNPU	95	53.064	Macaca_nemestrina
ENSKMAG00000004532	hnrnpub	100	85.348	ENSMAMG00000007196	hnrnpub	100	83.415	Mastacembelus_armatus
ENSKMAG00000004532	hnrnpub	100	82.274	ENSMZEG00005003185	hnrnpub	100	82.274	Maylandia_zebra
ENSKMAG00000004532	hnrnpub	91	59.459	ENSMAUG00000008842	Hnrnpu	79	83.721	Mesocricetus_auratus
ENSKMAG00000004532	hnrnpub	95	55.105	ENSMICG00000004616	HNRNPU	81	63.077	Microcebus_murinus
ENSKMAG00000004532	hnrnpub	91	59.459	ENSMOCG00000015623	Hnrnpu	79	83.721	Microtus_ochrogaster
ENSKMAG00000004532	hnrnpub	85	78.261	ENSMODG00000006515	HNRNPU	99	47.774	Monodelphis_domestica
ENSKMAG00000004532	hnrnpub	96	84.117	ENSMALG00000018243	hnrnpub	99	82.803	Monopterus_albus
ENSKMAG00000004532	hnrnpub	80	55.038	MGP_CAROLIEiJ_G0014962	Hnrnpu	76	54.665	Mus_caroli
ENSKMAG00000004532	hnrnpub	80	55.038	ENSMUSG00000039630	Hnrnpu	76	54.665	Mus_musculus
ENSKMAG00000004532	hnrnpub	80	54.737	MGP_PahariEiJ_G0028193	Hnrnpu	99	49.773	Mus_pahari
ENSKMAG00000004532	hnrnpub	80	55.038	MGP_SPRETEiJ_G0015761	Hnrnpu	76	54.665	Mus_spretus
ENSKMAG00000004532	hnrnpub	91	57.746	ENSMLUG00000000475	HNRNPU	84	61.538	Myotis_lucifugus
ENSKMAG00000004532	hnrnpub	99	49.715	ENSNGAG00000019075	Hnrnpu	76	54.853	Nannospalax_galili
ENSKMAG00000004532	hnrnpub	100	82.274	ENSNBRG00000017855	hnrnpub	100	82.274	Neolamprologus_brichardi
ENSKMAG00000004532	hnrnpub	71	78.261	ENSMEUG00000000541	HNRNPU	99	46.060	Notamacropus_eugenii
ENSKMAG00000004532	hnrnpub	100	81.907	ENSONIG00000001260	hnrnpub	100	79.829	Oreochromis_niloticus
ENSKMAG00000004532	hnrnpub	80	61.636	ENSOCUG00000014469	HNRNPU	82	55.038	Oryctolagus_cuniculus
ENSKMAG00000004532	hnrnpub	100	81.197	ENSORLG00000016114	hnrnpub	100	80.220	Oryzias_latipes
ENSKMAG00000004532	hnrnpub	100	81.197	ENSORLG00020005363	hnrnpub	100	80.464	Oryzias_latipes_hni
ENSKMAG00000004532	hnrnpub	100	81.074	ENSORLG00015001190	hnrnpub	100	80.098	Oryzias_latipes_hsok
ENSKMAG00000004532	hnrnpub	84	87.373	ENSOMEG00000014951	hnrnpub	100	80.854	Oryzias_melastigma
ENSKMAG00000004532	hnrnpub	99	49.661	ENSOGAG00000014024	HNRNPU	75	54.853	Otolemur_garnettii
ENSKMAG00000004532	hnrnpub	88	59.155	ENSPPAG00000038652	HNRNPU	95	53.194	Pan_paniscus
ENSKMAG00000004532	hnrnpub	91	59.155	ENSPPRG00000002662	HNRNPU	81	63.077	Panthera_pardus
ENSKMAG00000004532	hnrnpub	88	59.155	ENSPTRG00000002182	HNRNPU	95	53.194	Pan_troglodytes
ENSKMAG00000004532	hnrnpub	85	56.467	ENSPANG00000011643	HNRNPU	95	53.064	Papio_anubis
ENSKMAG00000004532	hnrnpub	100	65.988	ENSPKIG00000006885	hnrnpua	100	64.713	Paramormyrops_kingsleyae
ENSKMAG00000004532	hnrnpub	100	65.554	ENSPKIG00000022332	hnrnpub	100	63.962	Paramormyrops_kingsleyae
ENSKMAG00000004532	hnrnpub	85	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSKMAG00000004532	hnrnpub	100	81.917	ENSPFOG00000002908	hnrnpub	100	83.051	Poecilia_formosa
ENSKMAG00000004532	hnrnpub	100	81.432	ENSPLAG00000004160	hnrnpub	100	82.688	Poecilia_latipinna
ENSKMAG00000004532	hnrnpub	95	54.955	ENSPCOG00000018655	-	81	63.077	Propithecus_coquereli
ENSKMAG00000004532	hnrnpub	88	59.155	ENSPVAG00000002581	HNRNPU	81	63.077	Pteropus_vampyrus
ENSKMAG00000004532	hnrnpub	100	82.518	ENSPNYG00000021642	hnrnpub	100	82.518	Pundamilia_nyererei
ENSKMAG00000004532	hnrnpub	100	65.352	ENSPNAG00000001055	hnrnpub	100	62.830	Pygocentrus_nattereri
ENSKMAG00000004532	hnrnpub	80	55.038	ENSRNOG00000033790	Hnrnpu	75	55.132	Rattus_norvegicus
ENSKMAG00000004532	hnrnpub	85	55.772	ENSRBIG00000031519	HNRNPU	95	52.282	Rhinopithecus_bieti
ENSKMAG00000004532	hnrnpub	85	55.846	ENSRROG00000041642	HNRNPU	95	52.789	Rhinopithecus_roxellana
ENSKMAG00000004532	hnrnpub	100	65.403	ENSSFOG00015019004	hnrnpu	99	63.590	Scleropages_formosus
ENSKMAG00000004532	hnrnpub	100	66.825	ENSSFOG00015001124	hnrnpub	82	69.609	Scleropages_formosus
ENSKMAG00000004532	hnrnpub	84	84.670	ENSSMAG00000003607	hnrnpub	100	79.529	Scophthalmus_maximus
ENSKMAG00000004532	hnrnpub	100	84.000	ENSSDUG00000005912	hnrnpub	100	83.273	Seriola_dumerili
ENSKMAG00000004532	hnrnpub	84	87.572	ENSSLDG00000004899	hnrnpub	100	82.005	Seriola_lalandi_dorsalis
ENSKMAG00000004532	hnrnpub	82	56.036	ENSSPUG00000011393	HNRNPU	82	61.194	Sphenodon_punctatus
ENSKMAG00000004532	hnrnpub	100	83.741	ENSSPAG00000011853	hnrnpub	100	83.130	Stegastes_partitus
ENSKMAG00000004532	hnrnpub	88	59.155	ENSSSCG00000010877	HNRNPU	81	64.062	Sus_scrofa
ENSKMAG00000004532	hnrnpub	100	77.778	ENSTRUG00000007759	hnrnpub	100	75.957	Takifugu_rubripes
ENSKMAG00000004532	hnrnpub	100	72.847	ENSTNIG00000009725	hnrnpub	100	72.561	Tetraodon_nigroviridis
ENSKMAG00000004532	hnrnpub	88	59.155	ENSUAMG00000021120	HNRNPU	99	51.914	Ursus_americanus
ENSKMAG00000004532	hnrnpub	91	55.132	ENSUMAG00000012322	HNRNPU	87	57.576	Ursus_maritimus
ENSKMAG00000004532	hnrnpub	82	59.155	ENSVPAG00000010520	HNRNPU	85	63.077	Vicugna_pacos
ENSKMAG00000004532	hnrnpub	80	55.255	ENSVVUG00000026524	HNRNPU	75	55.147	Vulpes_vulpes
ENSKMAG00000004532	hnrnpub	99	48.661	ENSXETG00000011386	hnrnpu	77	52.416	Xenopus_tropicalis
ENSKMAG00000004532	hnrnpub	100	81.675	ENSXMAG00000010356	hnrnpub	100	82.688	Xiphophorus_maculatus