EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000004640 (Gene tree)
Gene ID: 108240592
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 12626 bases
Position: chrLWHD01000077.1:334033-346658
Accession: 108240592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000006136	Exo_endo_phos	PF03372.23	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000006242	-	3315	XM_017424178	ENSKMAP00000006136	558 (aa)	XP_017279667	UPI0007F8C99D

Gene Model

Click here to download ENSKMAG00000004640's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000004640	cnot6b	100	71.658	ENSKMAG00000004165	cnot6l	100	71.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004640	cnot6b	100	86.559	ENSG00000113300	CNOT6	100	94.737	Homo_sapiens
ENSKMAG00000004640	cnot6b	100	97.138	ENSAPOG00000009994	cnot6b	100	97.138	Acanthochromis_polyacanthus
ENSKMAG00000004640	cnot6b	100	86.607	ENSAMEG00000000949	CNOT6	99	86.607	Ailuropoda_melanoleuca
ENSKMAG00000004640	cnot6b	100	93.918	ENSACIG00000016566	cnot6b	100	93.918	Amphilophus_citrinellus
ENSKMAG00000004640	cnot6b	100	97.138	ENSAOCG00000006893	cnot6b	100	97.138	Amphiprion_ocellaris
ENSKMAG00000004640	cnot6b	100	97.138	ENSAPEG00000016949	cnot6b	100	97.138	Amphiprion_percula
ENSKMAG00000004640	cnot6b	100	93.202	ENSATEG00000007862	cnot6b	100	93.202	Anabas_testudineus
ENSKMAG00000004640	cnot6b	100	86.738	ENSAPLG00000012715	CNOT6	99	87.097	Anas_platyrhynchos
ENSKMAG00000004640	cnot6b	100	87.455	ENSACAG00000016548	CNOT6	100	87.455	Anolis_carolinensis
ENSKMAG00000004640	cnot6b	100	86.738	ENSANAG00000030436	CNOT6	96	86.738	Aotus_nancymaae
ENSKMAG00000004640	cnot6b	100	94.812	ENSACLG00000008279	cnot6b	100	94.812	Astatotilapia_calliptera
ENSKMAG00000004640	cnot6b	100	88.014	ENSAMXG00000034694	cnot6b	100	88.014	Astyanax_mexicanus
ENSKMAG00000004640	cnot6b	100	89.267	ENSAMXG00000019140	cnot6a	100	89.267	Astyanax_mexicanus
ENSKMAG00000004640	cnot6b	100	87.097	ENSBTAG00000017362	CNOT6	100	87.097	Bos_taurus
ENSKMAG00000004640	cnot6b	100	86.380	ENSCJAG00000009795	CNOT6	100	86.380	Callithrix_jacchus
ENSKMAG00000004640	cnot6b	100	86.918	ENSCAFG00000000464	CNOT6	100	86.918	Canis_familiaris
ENSKMAG00000004640	cnot6b	100	86.918	ENSCAFG00020002441	CNOT6	100	86.918	Canis_lupus_dingo
ENSKMAG00000004640	cnot6b	100	86.559	ENSCHIG00000019100	CNOT6	100	86.559	Capra_hircus
ENSKMAG00000004640	cnot6b	100	85.842	ENSTSYG00000003982	CNOT6	100	85.842	Carlito_syrichta
ENSKMAG00000004640	cnot6b	100	81.900	ENSCPOG00000035657	CNOT6	100	81.900	Cavia_porcellus
ENSKMAG00000004640	cnot6b	100	82.079	ENSCCAG00000033670	CNOT6	100	82.079	Cebus_capucinus
ENSKMAG00000004640	cnot6b	100	86.559	ENSCATG00000042014	CNOT6	100	86.559	Cercocebus_atys
ENSKMAG00000004640	cnot6b	100	85.305	ENSCLAG00000010489	CNOT6	100	85.305	Chinchilla_lanigera
ENSKMAG00000004640	cnot6b	100	86.559	ENSCSAG00000008165	CNOT6	100	86.559	Chlorocebus_sabaeus
ENSKMAG00000004640	cnot6b	100	85.842	ENSCHOG00000009680	CNOT6	100	86.201	Choloepus_hoffmanni
ENSKMAG00000004640	cnot6b	100	87.097	ENSCPBG00000008908	CNOT6	100	87.455	Chrysemys_picta_bellii
ENSKMAG00000004640	cnot6b	100	86.738	ENSCANG00000026756	CNOT6	100	86.738	Colobus_angolensis_palliatus
ENSKMAG00000004640	cnot6b	100	85.125	ENSCGRG00001011452	Cnot6	100	85.125	Cricetulus_griseus_chok1gshd
ENSKMAG00000004640	cnot6b	100	83.154	ENSCGRG00000010407	Cnot6	100	83.154	Cricetulus_griseus_crigri
ENSKMAG00000004640	cnot6b	100	95.707	ENSCSEG00000010939	cnot6b	100	95.707	Cynoglossus_semilaevis
ENSKMAG00000004640	cnot6b	100	96.416	ENSCVAG00000010538	cnot6b	100	96.416	Cyprinodon_variegatus
ENSKMAG00000004640	cnot6b	100	88.014	ENSDARG00000008255	cnot6a	100	88.014	Danio_rerio
ENSKMAG00000004640	cnot6b	100	87.120	ENSDARG00000101072	cnot6b	100	87.120	Danio_rerio
ENSKMAG00000004640	cnot6b	100	87.097	ENSDNOG00000041644	CNOT6	100	87.097	Dasypus_novemcinctus
ENSKMAG00000004640	cnot6b	100	77.419	ENSDORG00000001708	Cnot6	100	77.419	Dipodomys_ordii
ENSKMAG00000004640	cnot6b	100	69.643	ENSETEG00000006975	CNOT6	100	69.643	Echinops_telfairi
ENSKMAG00000004640	cnot6b	100	86.738	ENSEASG00005012794	-	100	86.738	Equus_asinus_asinus
ENSKMAG00000004640	cnot6b	90	81.637	ENSEASG00005012957	-	99	81.637	Equus_asinus_asinus
ENSKMAG00000004640	cnot6b	100	87.276	ENSECAG00000019325	CNOT6	100	87.276	Equus_caballus
ENSKMAG00000004640	cnot6b	100	81.900	ENSECAG00000012704	-	99	81.900	Equus_caballus
ENSKMAG00000004640	cnot6b	100	86.380	ENSEEUG00000015382	CNOT6	100	86.380	Erinaceus_europaeus
ENSKMAG00000004640	cnot6b	100	86.404	ENSELUG00000024580	cnot6a	100	86.404	Esox_lucius
ENSKMAG00000004640	cnot6b	100	86.949	ENSELUG00000015981	cnot6b	99	86.949	Esox_lucius
ENSKMAG00000004640	cnot6b	100	87.097	ENSFCAG00000001881	CNOT6	100	87.097	Felis_catus
ENSKMAG00000004640	cnot6b	100	86.918	ENSFALG00000007699	CNOT6	100	87.276	Ficedula_albicollis
ENSKMAG00000004640	cnot6b	100	85.125	ENSFDAG00000001999	CNOT6	100	85.125	Fukomys_damarensis
ENSKMAG00000004640	cnot6b	68	96.238	ENSFHEG00000013756	cnot6b	99	96.238	Fundulus_heteroclitus
ENSKMAG00000004640	cnot6b	95	92.250	ENSGMOG00000009767	cnot6b	99	92.250	Gadus_morhua
ENSKMAG00000004640	cnot6b	100	86.738	ENSGALG00000034316	CNOT6	100	87.097	Gallus_gallus
ENSKMAG00000004640	cnot6b	100	97.133	ENSGAFG00000008525	cnot6b	100	97.133	Gambusia_affinis
ENSKMAG00000004640	cnot6b	95	91.304	ENSGACG00000018046	cnot6b	99	91.304	Gasterosteus_aculeatus
ENSKMAG00000004640	cnot6b	100	72.401	ENSGAGG00000012176	CNOT6	100	72.760	Gopherus_agassizii
ENSKMAG00000004640	cnot6b	100	86.559	ENSGGOG00000003675	CNOT6	100	86.559	Gorilla_gorilla
ENSKMAG00000004640	cnot6b	100	94.991	ENSHBUG00000002819	cnot6b	100	94.991	Haplochromis_burtoni
ENSKMAG00000004640	cnot6b	100	85.484	ENSHGLG00000017756	CNOT6	100	85.484	Heterocephalus_glaber_female
ENSKMAG00000004640	cnot6b	100	85.484	ENSHGLG00100005747	CNOT6	100	85.484	Heterocephalus_glaber_male
ENSKMAG00000004640	cnot6b	100	93.202	ENSHCOG00000016176	cnot6b	100	93.202	Hippocampus_comes
ENSKMAG00000004640	cnot6b	100	88.551	ENSIPUG00000019831	cnot6a	100	88.551	Ictalurus_punctatus
ENSKMAG00000004640	cnot6b	100	88.372	ENSIPUG00000017482	cnot6b	100	88.372	Ictalurus_punctatus
ENSKMAG00000004640	cnot6b	100	86.738	ENSSTOG00000002803	CNOT6	100	86.738	Ictidomys_tridecemlineatus
ENSKMAG00000004640	cnot6b	100	85.842	ENSJJAG00000012296	Cnot6	100	85.842	Jaculus_jaculus
ENSKMAG00000004640	cnot6b	100	94.097	ENSLBEG00000027917	cnot6b	100	94.097	Labrus_bergylta
ENSKMAG00000004640	cnot6b	100	92.665	ENSLOCG00000010102	cnot6b	99	92.665	Lepisosteus_oculatus
ENSKMAG00000004640	cnot6b	100	87.276	ENSLAFG00000016742	CNOT6	100	87.276	Loxodonta_africana
ENSKMAG00000004640	cnot6b	100	86.559	ENSMFAG00000030867	CNOT6	100	86.559	Macaca_fascicularis
ENSKMAG00000004640	cnot6b	100	86.559	ENSMMUG00000018690	CNOT6	100	86.559	Macaca_mulatta
ENSKMAG00000004640	cnot6b	100	86.559	ENSMNEG00000038565	CNOT6	100	86.559	Macaca_nemestrina
ENSKMAG00000004640	cnot6b	100	86.559	ENSMLEG00000010555	CNOT6	100	86.559	Mandrillus_leucophaeus
ENSKMAG00000004640	cnot6b	100	96.780	ENSMAMG00000007515	cnot6b	100	96.780	Mastacembelus_armatus
ENSKMAG00000004640	cnot6b	100	94.812	ENSMZEG00005012899	cnot6b	100	94.812	Maylandia_zebra
ENSKMAG00000004640	cnot6b	100	85.842	ENSMAUG00000019798	Cnot6	100	85.842	Mesocricetus_auratus
ENSKMAG00000004640	cnot6b	98	78.532	ENSMICG00000028378	-	99	78.532	Microcebus_murinus
ENSKMAG00000004640	cnot6b	100	84.946	ENSMICG00000013018	-	100	84.946	Microcebus_murinus
ENSKMAG00000004640	cnot6b	100	85.842	ENSMOCG00000021662	Cnot6	100	85.842	Microtus_ochrogaster
ENSKMAG00000004640	cnot6b	100	92.308	ENSMMOG00000003227	cnot6b	100	92.308	Mola_mola
ENSKMAG00000004640	cnot6b	100	86.201	ENSMODG00000003979	CNOT6	100	86.559	Monodelphis_domestica
ENSKMAG00000004640	cnot6b	100	95.886	ENSMALG00000014251	cnot6b	100	95.886	Monopterus_albus
ENSKMAG00000004640	cnot6b	100	86.022	MGP_CAROLIEiJ_G0016277	Cnot6	100	86.022	Mus_caroli
ENSKMAG00000004640	cnot6b	100	86.022	ENSMUSG00000020362	Cnot6	100	86.022	Mus_musculus
ENSKMAG00000004640	cnot6b	100	86.022	MGP_PahariEiJ_G0017413	Cnot6	100	86.022	Mus_pahari
ENSKMAG00000004640	cnot6b	100	86.022	MGP_SPRETEiJ_G0017122	Cnot6	100	86.022	Mus_spretus
ENSKMAG00000004640	cnot6b	100	86.918	ENSMPUG00000000587	CNOT6	96	86.918	Mustela_putorius_furo
ENSKMAG00000004640	cnot6b	100	85.790	ENSMLUG00000010257	CNOT6	100	85.790	Myotis_lucifugus
ENSKMAG00000004640	cnot6b	100	85.125	ENSNGAG00000008269	Cnot6	100	85.484	Nannospalax_galili
ENSKMAG00000004640	cnot6b	100	94.991	ENSNBRG00000010798	cnot6b	100	94.991	Neolamprologus_brichardi
ENSKMAG00000004640	cnot6b	100	85.484	ENSNLEG00000002322	CNOT6	100	85.484	Nomascus_leucogenys
ENSKMAG00000004640	cnot6b	81	81.860	ENSMEUG00000000025	CNOT6	81	82.791	Notamacropus_eugenii
ENSKMAG00000004640	cnot6b	88	86.874	ENSOPRG00000008244	-	88	86.874	Ochotona_princeps
ENSKMAG00000004640	cnot6b	100	84.767	ENSODEG00000007041	CNOT6	100	84.767	Octodon_degus
ENSKMAG00000004640	cnot6b	75	94.090	ENSONIG00000013027	cnot6b	99	94.090	Oreochromis_niloticus
ENSKMAG00000004640	cnot6b	100	86.738	ENSOANG00000010226	CNOT6	100	86.738	Ornithorhynchus_anatinus
ENSKMAG00000004640	cnot6b	100	85.357	ENSOCUG00000011083	CNOT6	100	85.357	Oryctolagus_cuniculus
ENSKMAG00000004640	cnot6b	100	95.170	ENSORLG00000005059	cnot6b	100	95.170	Oryzias_latipes
ENSKMAG00000004640	cnot6b	100	95.170	ENSORLG00020012784	cnot6b	100	95.170	Oryzias_latipes_hni
ENSKMAG00000004640	cnot6b	94	94.646	ENSORLG00015022658	cnot6b	98	94.646	Oryzias_latipes_hsok
ENSKMAG00000004640	cnot6b	100	95.349	ENSOMEG00000005295	cnot6b	100	95.349	Oryzias_melastigma
ENSKMAG00000004640	cnot6b	94	85.714	ENSOGAG00000032470	CNOT6	100	85.714	Otolemur_garnettii
ENSKMAG00000004640	cnot6b	97	86.004	ENSOARG00000001003	CNOT6	100	86.004	Ovis_aries
ENSKMAG00000004640	cnot6b	100	86.559	ENSPPAG00000032253	CNOT6	100	86.559	Pan_paniscus
ENSKMAG00000004640	cnot6b	100	86.918	ENSPPRG00000011912	CNOT6	100	86.918	Panthera_pardus
ENSKMAG00000004640	cnot6b	100	86.918	ENSPTIG00000016794	CNOT6	100	86.918	Panthera_tigris_altaica
ENSKMAG00000004640	cnot6b	100	86.559	ENSPTRG00000017636	CNOT6	100	86.559	Pan_troglodytes
ENSKMAG00000004640	cnot6b	100	86.559	ENSPANG00000016191	CNOT6	100	86.559	Papio_anubis
ENSKMAG00000004640	cnot6b	100	89.803	ENSPKIG00000021368	cnot6b	100	89.803	Paramormyrops_kingsleyae
ENSKMAG00000004640	cnot6b	98	86.789	ENSPSIG00000017307	CNOT6	100	87.156	Pelodiscus_sinensis
ENSKMAG00000004640	cnot6b	100	94.097	ENSPMGG00000011238	cnot6b	100	94.097	Periophthalmus_magnuspinnatus
ENSKMAG00000004640	cnot6b	100	84.946	ENSPEMG00000000627	Cnot6	100	85.305	Peromyscus_maniculatus_bairdii
ENSKMAG00000004640	cnot6b	100	86.559	ENSPCIG00000020319	CNOT6	99	86.918	Phascolarctos_cinereus
ENSKMAG00000004640	cnot6b	100	97.133	ENSPFOG00000006291	cnot6b	100	97.133	Poecilia_formosa
ENSKMAG00000004640	cnot6b	100	93.011	ENSPLAG00000008266	cnot6b	100	93.011	Poecilia_latipinna
ENSKMAG00000004640	cnot6b	100	97.312	ENSPMEG00000009091	cnot6b	100	97.312	Poecilia_mexicana
ENSKMAG00000004640	cnot6b	100	95.699	ENSPREG00000003713	cnot6b	100	95.699	Poecilia_reticulata
ENSKMAG00000004640	cnot6b	100	86.559	ENSPPYG00000016137	CNOT6	100	86.559	Pongo_abelii
ENSKMAG00000004640	cnot6b	71	83.521	ENSPCAG00000005599	-	71	83.521	Procavia_capensis
ENSKMAG00000004640	cnot6b	100	80.824	ENSPCOG00000017359	CNOT6	100	81.541	Propithecus_coquereli
ENSKMAG00000004640	cnot6b	100	83.154	ENSPVAG00000003069	CNOT6	100	83.154	Pteropus_vampyrus
ENSKMAG00000004640	cnot6b	100	94.633	ENSPNYG00000000321	cnot6b	100	94.633	Pundamilia_nyererei
ENSKMAG00000004640	cnot6b	100	89.088	ENSPNAG00000029586	cnot6a	100	89.088	Pygocentrus_nattereri
ENSKMAG00000004640	cnot6b	100	88.372	ENSPNAG00000028816	cnot6b	100	88.372	Pygocentrus_nattereri
ENSKMAG00000004640	cnot6b	100	85.305	ENSRNOG00000054891	Cnot6	100	85.305	Rattus_norvegicus
ENSKMAG00000004640	cnot6b	100	86.380	ENSRBIG00000004309	CNOT6	100	86.380	Rhinopithecus_bieti
ENSKMAG00000004640	cnot6b	100	86.380	ENSRROG00000035378	CNOT6	100	86.380	Rhinopithecus_roxellana
ENSKMAG00000004640	cnot6b	100	86.738	ENSSBOG00000030494	CNOT6	100	86.738	Saimiri_boliviensis_boliviensis
ENSKMAG00000004640	cnot6b	100	86.201	ENSSHAG00000017436	CNOT6	100	86.559	Sarcophilus_harrisii
ENSKMAG00000004640	cnot6b	100	89.445	ENSSFOG00015022383	cnot6a	96	89.445	Scleropages_formosus
ENSKMAG00000004640	cnot6b	100	91.055	ENSSFOG00015015133	CNOT6	100	91.413	Scleropages_formosus
ENSKMAG00000004640	cnot6b	100	94.275	ENSSMAG00000003084	cnot6b	100	94.275	Scophthalmus_maximus
ENSKMAG00000004640	cnot6b	100	96.243	ENSSDUG00000004151	cnot6b	100	96.243	Seriola_dumerili
ENSKMAG00000004640	cnot6b	100	96.064	ENSSLDG00000004448	cnot6b	100	96.064	Seriola_lalandi_dorsalis
ENSKMAG00000004640	cnot6b	64	68.156	ENSSARG00000012650	-	100	68.156	Sorex_araneus
ENSKMAG00000004640	cnot6b	100	87.276	ENSSPUG00000007893	CNOT6	100	87.634	Sphenodon_punctatus
ENSKMAG00000004640	cnot6b	100	96.959	ENSSPAG00000000149	cnot6b	100	96.959	Stegastes_partitus
ENSKMAG00000004640	cnot6b	100	86.918	ENSSSCG00000014009	CNOT6	100	86.918	Sus_scrofa
ENSKMAG00000004640	cnot6b	100	86.559	ENSTGUG00000001119	CNOT6	100	86.918	Taeniopygia_guttata
ENSKMAG00000004640	cnot6b	100	93.190	ENSTRUG00000002818	cnot6b	100	93.190	Takifugu_rubripes
ENSKMAG00000004640	cnot6b	100	93.369	ENSTNIG00000004443	cnot6b	99	93.369	Tetraodon_nigroviridis
ENSKMAG00000004640	cnot6b	87	61.602	ENSTBEG00000017094	-	100	61.602	Tupaia_belangeri
ENSKMAG00000004640	cnot6b	100	86.918	ENSTTRG00000009363	CNOT6	100	86.918	Tursiops_truncatus
ENSKMAG00000004640	cnot6b	90	76.143	ENSUAMG00000004579	CNOT6	99	76.143	Ursus_americanus
ENSKMAG00000004640	cnot6b	100	82.735	ENSUMAG00000024577	CNOT6	100	82.735	Ursus_maritimus
ENSKMAG00000004640	cnot6b	84	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSKMAG00000004640	cnot6b	100	86.918	ENSVVUG00000026940	CNOT6	100	86.918	Vulpes_vulpes
ENSKMAG00000004640	cnot6b	100	93.369	ENSXCOG00000003360	cnot6b	100	93.369	Xiphophorus_couchianus
ENSKMAG00000004640	cnot6b	100	97.312	ENSXMAG00000008730	cnot6b	100	97.312	Xiphophorus_maculatus