EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000004744 (Gene tree)
Gene ID: 108241102
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 11027 bases
Position: chrLWHD01000082.1:1497771-1508797
Accession: 108241099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000006296	ResIII	PF04851.15	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000006413	-	1730	XM_017425025	ENSKMAP00000006305	321 (aa)	XP_017280514	UPI0007F8B66A
ENSKMAT00000006404	-	2538	XM_017425019	ENSKMAP00000006296	845 (aa)	XP_017280508	-

Gene Model

Click here to download ENSKMAG00000004744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000004744	rad54b	68	31.615	ENSKMAG00000003777	smarca5	52	31.615
ENSKMAG00000004744	rad54b	59	33.597	ENSKMAG00000014358	chd1l	51	31.930
ENSKMAG00000004744	rad54b	75	44.257	ENSKMAG00000009944	rad54l	90	41.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000004744	rad54b	99	53.108	ENSG00000197275	RAD54B	91	55.124	Homo_sapiens
ENSKMAG00000004744	rad54b	84	57.045	ENSG00000265817	FSBP	99	57.045	Homo_sapiens
ENSKMAG00000004744	rad54b	99	53.821	ENSAMEG00000005834	-	99	53.821	Ailuropoda_melanoleuca
ENSKMAG00000004744	rad54b	100	78.143	ENSACIG00000013005	rad54b	100	78.143	Amphilophus_citrinellus
ENSKMAG00000004744	rad54b	97	79.832	ENSAOCG00000008523	rad54b	89	83.100	Amphiprion_ocellaris
ENSKMAG00000004744	rad54b	100	75.599	ENSAPEG00000001673	rad54b	100	75.626	Amphiprion_percula
ENSKMAG00000004744	rad54b	100	77.880	ENSATEG00000001527	rad54b	100	77.880	Anabas_testudineus
ENSKMAG00000004744	rad54b	91	60.656	ENSAPLG00000014366	-	85	60.656	Anas_platyrhynchos
ENSKMAG00000004744	rad54b	91	58.987	ENSACAG00000003671	-	97	58.987	Anolis_carolinensis
ENSKMAG00000004744	rad54b	75	58.978	ENSANAG00000019528	-	99	58.978	Aotus_nancymaae
ENSKMAG00000004744	rad54b	100	80.349	ENSACLG00000007826	rad54b	100	80.442	Astatotilapia_calliptera
ENSKMAG00000004744	rad54b	90	67.866	ENSAMXG00000039985	rad54b	94	67.516	Astyanax_mexicanus
ENSKMAG00000004744	rad54b	99	54.158	ENSBTAG00000000632	RAD54B	99	54.158	Bos_taurus
ENSKMAG00000004744	rad54b	85	35.957	WBGene00013792	Y116A8C.13	83	35.839	Caenorhabditis_elegans
ENSKMAG00000004744	rad54b	99	52.954	ENSCJAG00000000080	-	99	56.927	Callithrix_jacchus
ENSKMAG00000004744	rad54b	99	54.575	ENSCAFG00000009179	RAD54B	99	54.575	Canis_familiaris
ENSKMAG00000004744	rad54b	99	54.575	ENSCAFG00020012084	-	99	54.575	Canis_lupus_dingo
ENSKMAG00000004744	rad54b	99	54.158	ENSCHIG00000008230	-	99	54.158	Capra_hircus
ENSKMAG00000004744	rad54b	91	58.608	ENSTSYG00000013234	-	86	58.608	Carlito_syrichta
ENSKMAG00000004744	rad54b	95	57.579	ENSCPOG00000011643	-	90	57.579	Cavia_porcellus
ENSKMAG00000004744	rad54b	99	52.769	ENSCCAG00000011754	-	99	56.831	Cebus_capucinus
ENSKMAG00000004744	rad54b	99	52.516	ENSCATG00000030661	-	99	56.593	Cercocebus_atys
ENSKMAG00000004744	rad54b	99	54.474	ENSCLAG00000010476	-	99	54.372	Chinchilla_lanigera
ENSKMAG00000004744	rad54b	99	53.115	ENSCSAG00000012712	-	99	53.115	Chlorocebus_sabaeus
ENSKMAG00000004744	rad54b	94	59.781	ENSCPBG00000003204	-	86	63.038	Chrysemys_picta_bellii
ENSKMAG00000004744	rad54b	99	52.626	ENSCANG00000017939	-	99	56.593	Colobus_angolensis_palliatus
ENSKMAG00000004744	rad54b	99	53.612	ENSCGRG00001020184	Rad54b	99	53.612	Cricetulus_griseus_chok1gshd
ENSKMAG00000004744	rad54b	99	52.750	ENSCGRG00000016752	Rad54b	99	52.750	Cricetulus_griseus_crigri
ENSKMAG00000004744	rad54b	99	75.527	ENSCSEG00000001601	rad54b	99	75.527	Cynoglossus_semilaevis
ENSKMAG00000004744	rad54b	100	77.159	ENSCVAG00000009200	rad54b	100	77.159	Cyprinodon_variegatus
ENSKMAG00000004744	rad54b	99	62.629	ENSDARG00000092134	rad54b	99	67.449	Danio_rerio
ENSKMAG00000004744	rad54b	91	58.555	ENSDNOG00000015535	-	85	58.555	Dasypus_novemcinctus
ENSKMAG00000004744	rad54b	99	54.915	ENSDORG00000002492	Rad54b	99	54.915	Dipodomys_ordii
ENSKMAG00000004744	rad54b	87	57.018	ENSETEG00000010605	-	100	57.018	Echinops_telfairi
ENSKMAG00000004744	rad54b	94	50.308	ENSEBUG00000009104	rad54b	86	50.308	Eptatretus_burgeri
ENSKMAG00000004744	rad54b	91	57.975	ENSEASG00005004021	-	88	57.975	Equus_asinus_asinus
ENSKMAG00000004744	rad54b	99	53.536	ENSECAG00000021949	-	99	53.536	Equus_caballus
ENSKMAG00000004744	rad54b	76	48.800	ENSEEUG00000008056	-	72	48.800	Erinaceus_europaeus
ENSKMAG00000004744	rad54b	96	75.476	ENSELUG00000009287	rad54b	88	75.476	Esox_lucius
ENSKMAG00000004744	rad54b	99	54.208	ENSFCAG00000015513	-	99	58.493	Felis_catus
ENSKMAG00000004744	rad54b	91	60.277	ENSFALG00000005467	-	85	60.277	Ficedula_albicollis
ENSKMAG00000004744	rad54b	93	57.764	ENSFDAG00000020541	-	87	57.764	Fukomys_damarensis
ENSKMAG00000004744	rad54b	91	81.226	ENSFHEG00000014382	rad54b	86	81.122	Fundulus_heteroclitus
ENSKMAG00000004744	rad54b	91	77.497	ENSGMOG00000014774	rad54b	98	77.497	Gadus_morhua
ENSKMAG00000004744	rad54b	91	60.705	ENSGALG00000043597	RAD54B	85	60.705	Gallus_gallus
ENSKMAG00000004744	rad54b	99	81.486	ENSGAFG00000007901	rad54b	99	81.486	Gambusia_affinis
ENSKMAG00000004744	rad54b	91	80.253	ENSGACG00000009128	rad54b	85	80.253	Gasterosteus_aculeatus
ENSKMAG00000004744	rad54b	94	60.123	ENSGAGG00000018747	-	88	60.049	Gopherus_agassizii
ENSKMAG00000004744	rad54b	99	53.282	ENSGGOG00000023516	-	91	55.176	Gorilla_gorilla
ENSKMAG00000004744	rad54b	96	80.987	ENSHBUG00000016017	rad54b	88	80.987	Haplochromis_burtoni
ENSKMAG00000004744	rad54b	99	52.979	ENSHGLG00000008263	RAD54B	99	52.979	Heterocephalus_glaber_female
ENSKMAG00000004744	rad54b	99	52.314	ENSHGLG00100008108	-	99	52.314	Heterocephalus_glaber_male
ENSKMAG00000004744	rad54b	95	74.198	ENSHCOG00000004764	rad54b	100	69.907	Hippocampus_comes
ENSKMAG00000004744	rad54b	99	59.958	ENSIPUG00000018531	rad54b	99	59.958	Ictalurus_punctatus
ENSKMAG00000004744	rad54b	94	55.854	ENSSTOG00000010791	-	88	55.854	Ictidomys_tridecemlineatus
ENSKMAG00000004744	rad54b	93	56.143	ENSJJAG00000010314	Rad54b	87	56.143	Jaculus_jaculus
ENSKMAG00000004744	rad54b	87	62.884	ENSLACG00000000859	-	100	62.884	Latimeria_chalumnae
ENSKMAG00000004744	rad54b	95	66.546	ENSLOCG00000010100	rad54b	97	67.029	Lepisosteus_oculatus
ENSKMAG00000004744	rad54b	91	56.944	ENSLAFG00000015315	-	97	56.944	Loxodonta_africana
ENSKMAG00000004744	rad54b	99	52.516	ENSMFAG00000031629	-	99	56.593	Macaca_fascicularis
ENSKMAG00000004744	rad54b	99	52.516	ENSMMUG00000005659	-	99	52.516	Macaca_mulatta
ENSKMAG00000004744	rad54b	99	52.464	ENSMNEG00000016408	-	99	52.464	Macaca_nemestrina
ENSKMAG00000004744	rad54b	99	52.407	ENSMLEG00000006946	-	99	52.407	Mandrillus_leucophaeus
ENSKMAG00000004744	rad54b	99	76.196	ENSMAMG00000012269	rad54b	99	76.023	Mastacembelus_armatus
ENSKMAG00000004744	rad54b	96	80.695	ENSMZEG00005005281	rad54b	94	84.635	Maylandia_zebra
ENSKMAG00000004744	rad54b	91	60.453	ENSMGAG00000012024	-	85	60.453	Meleagris_gallopavo
ENSKMAG00000004744	rad54b	99	53.266	ENSMAUG00000013586	Rad54b	99	53.266	Mesocricetus_auratus
ENSKMAG00000004744	rad54b	99	54.462	ENSMICG00000000754	-	99	54.462	Microcebus_murinus
ENSKMAG00000004744	rad54b	99	54.078	ENSMOCG00000020035	Rad54b	99	54.190	Microtus_ochrogaster
ENSKMAG00000004744	rad54b	99	75.113	ENSMMOG00000003394	rad54b	99	75.113	Mola_mola
ENSKMAG00000004744	rad54b	93	57.572	ENSMODG00000007343	-	98	57.572	Monodelphis_domestica
ENSKMAG00000004744	rad54b	74	82.104	ENSMALG00000001520	rad54b	100	82.104	Monopterus_albus
ENSKMAG00000004744	rad54b	99	55.257	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.257	Mus_caroli
ENSKMAG00000004744	rad54b	99	54.922	ENSMUSG00000078773	Rad54b	99	54.922	Mus_musculus
ENSKMAG00000004744	rad54b	99	54.535	MGP_PahariEiJ_G0023933	Rad54b	99	54.535	Mus_pahari
ENSKMAG00000004744	rad54b	99	55.369	MGP_SPRETEiJ_G0026758	Rad54b	99	55.369	Mus_spretus
ENSKMAG00000004744	rad54b	95	56.479	ENSMPUG00000008878	-	99	56.479	Mustela_putorius_furo
ENSKMAG00000004744	rad54b	99	53.863	ENSMLUG00000008953	-	99	53.863	Myotis_lucifugus
ENSKMAG00000004744	rad54b	99	53.311	ENSNGAG00000017537	Rad54b	99	53.311	Nannospalax_galili
ENSKMAG00000004744	rad54b	100	80.792	ENSNBRG00000013394	rad54b	100	80.792	Neolamprologus_brichardi
ENSKMAG00000004744	rad54b	99	52.459	ENSNLEG00000003062	-	99	57.045	Nomascus_leucogenys
ENSKMAG00000004744	rad54b	73	63.212	ENSMEUG00000012426	-	69	63.212	Notamacropus_eugenii
ENSKMAG00000004744	rad54b	86	59.259	ENSODEG00000002650	-	98	59.259	Octodon_degus
ENSKMAG00000004744	rad54b	99	53.501	ENSODEG00000019564	-	99	53.501	Octodon_degus
ENSKMAG00000004744	rad54b	94	87.500	ENSONIG00000006067	rad54b	89	87.500	Oreochromis_niloticus
ENSKMAG00000004744	rad54b	87	58.995	ENSOANG00000011348	-	99	58.995	Ornithorhynchus_anatinus
ENSKMAG00000004744	rad54b	99	53.224	ENSOCUG00000016478	-	99	53.224	Oryctolagus_cuniculus
ENSKMAG00000004744	rad54b	91	81.298	ENSORLG00000008918	rad54b	100	82.636	Oryzias_latipes
ENSKMAG00000004744	rad54b	74	82.481	ENSORLG00020012171	rad54b	100	82.481	Oryzias_latipes_hni
ENSKMAG00000004744	rad54b	100	71.398	ENSORLG00015018536	rad54b	100	71.398	Oryzias_latipes_hsok
ENSKMAG00000004744	rad54b	89	82.068	ENSOMEG00000004345	rad54b	99	82.068	Oryzias_melastigma
ENSKMAG00000004744	rad54b	99	51.638	ENSOGAG00000007854	-	99	51.638	Otolemur_garnettii
ENSKMAG00000004744	rad54b	91	58.734	ENSOARG00000007691	-	97	58.734	Ovis_aries
ENSKMAG00000004744	rad54b	99	52.017	ENSPPAG00000029572	-	99	52.017	Pan_paniscus
ENSKMAG00000004744	rad54b	99	53.989	ENSPPRG00000007571	-	99	58.356	Panthera_pardus
ENSKMAG00000004744	rad54b	84	58.356	ENSPTIG00000012670	-	99	58.356	Panthera_tigris_altaica
ENSKMAG00000004744	rad54b	99	52.999	ENSPTRG00000020427	-	99	56.908	Pan_troglodytes
ENSKMAG00000004744	rad54b	99	52.516	ENSPANG00000019566	-	99	52.516	Papio_anubis
ENSKMAG00000004744	rad54b	99	62.189	ENSPKIG00000014974	rad54b	99	62.189	Paramormyrops_kingsleyae
ENSKMAG00000004744	rad54b	95	59.107	ENSPSIG00000002383	-	97	59.535	Pelodiscus_sinensis
ENSKMAG00000004744	rad54b	99	53.803	ENSPEMG00000012133	Rad54b	99	53.803	Peromyscus_maniculatus_bairdii
ENSKMAG00000004744	rad54b	91	57.252	ENSPMAG00000002916	rad54b	97	57.761	Petromyzon_marinus
ENSKMAG00000004744	rad54b	93	59.189	ENSPCIG00000020151	-	93	59.189	Phascolarctos_cinereus
ENSKMAG00000004744	rad54b	91	84.694	ENSPFOG00000023411	rad54b	84	84.694	Poecilia_formosa
ENSKMAG00000004744	rad54b	91	84.694	ENSPLAG00000010430	rad54b	84	84.694	Poecilia_latipinna
ENSKMAG00000004744	rad54b	99	80.756	ENSPMEG00000016873	rad54b	99	80.874	Poecilia_mexicana
ENSKMAG00000004744	rad54b	95	84.949	ENSPREG00000018443	rad54b	99	80.578	Poecilia_reticulata
ENSKMAG00000004744	rad54b	99	52.350	ENSPPYG00000018750	-	99	52.454	Pongo_abelii
ENSKMAG00000004744	rad54b	99	52.614	ENSPCOG00000026845	-	99	57.026	Propithecus_coquereli
ENSKMAG00000004744	rad54b	87	56.667	ENSPVAG00000000261	-	86	56.667	Pteropus_vampyrus
ENSKMAG00000004744	rad54b	91	84.903	ENSPNYG00000018303	rad54b	95	84.903	Pundamilia_nyererei
ENSKMAG00000004744	rad54b	99	65.100	ENSPNAG00000000295	rad54b	99	65.100	Pygocentrus_nattereri
ENSKMAG00000004744	rad54b	99	54.087	ENSRNOG00000039949	Rad54b	99	54.087	Rattus_norvegicus
ENSKMAG00000004744	rad54b	99	52.672	ENSRBIG00000020419	-	99	52.672	Rhinopithecus_bieti
ENSKMAG00000004744	rad54b	99	52.672	ENSRROG00000039897	-	99	52.672	Rhinopithecus_roxellana
ENSKMAG00000004744	rad54b	85	36.888	YBR073W	RDH54	79	37.224	Saccharomyces_cerevisiae
ENSKMAG00000004744	rad54b	99	53.057	ENSSBOG00000028501	-	99	53.057	Saimiri_boliviensis_boliviensis
ENSKMAG00000004744	rad54b	93	59.000	ENSSHAG00000017038	-	87	59.000	Sarcophilus_harrisii
ENSKMAG00000004744	rad54b	67	70.351	ENSSFOG00015008483	rad54b	89	70.351	Scleropages_formosus
ENSKMAG00000004744	rad54b	99	77.146	ENSSMAG00000018659	rad54b	99	77.326	Scophthalmus_maximus
ENSKMAG00000004744	rad54b	88	83.069	ENSSDUG00000001122	rad54b	79	83.069	Seriola_dumerili
ENSKMAG00000004744	rad54b	100	75.203	ENSSLDG00000013787	rad54b	100	75.203	Seriola_lalandi_dorsalis
ENSKMAG00000004744	rad54b	99	57.795	ENSSPUG00000016497	-	99	57.795	Sphenodon_punctatus
ENSKMAG00000004744	rad54b	100	79.001	ENSSPAG00000012800	rad54b	100	79.001	Stegastes_partitus
ENSKMAG00000004744	rad54b	99	53.599	ENSSSCG00000006101	-	97	57.761	Sus_scrofa
ENSKMAG00000004744	rad54b	91	60.809	ENSTGUG00000011880	-	86	60.809	Taeniopygia_guttata
ENSKMAG00000004744	rad54b	91	80.000	ENSTRUG00000010015	rad54b	83	80.000	Takifugu_rubripes
ENSKMAG00000004744	rad54b	99	50.055	ENSTTRG00000006312	-	99	50.055	Tursiops_truncatus
ENSKMAG00000004744	rad54b	99	54.148	ENSUMAG00000016401	-	99	54.148	Ursus_maritimus
ENSKMAG00000004744	rad54b	99	53.661	ENSVPAG00000003157	-	99	53.661	Vicugna_pacos
ENSKMAG00000004744	rad54b	99	49.330	ENSXETG00000025924	rad54b	97	53.964	Xenopus_tropicalis
ENSKMAG00000004744	rad54b	99	79.698	ENSXMAG00000013141	rad54b	99	79.698	Xiphophorus_maculatus