EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000004863 (Gene tree)
Gene ID
108235520
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
7816 bases
Position
chrLWHD01000034.1:240325-248140
Accession
108235520
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000006519Not3PF04065.153.3e-9711
ENSKMAP00000006423Not3PF04065.156.2e-9711
ENSKMAP00000006485Not3PF04065.156.5e-9711
ENSKMAP00000006460Not3PF04065.156e-8312
ENSKMAP00000006460Not3PF04065.156e-8322
ENSKMAP00000006519NOT2_3_5PF04153.182.5e-3811
ENSKMAP00000006423NOT2_3_5PF04153.184.1e-3811
ENSKMAP00000006460NOT2_3_5PF04153.183.4e-2611
ENSKMAP00000006485NOT2_3_5PF04153.182.7e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000006593-3007-ENSKMAP00000006485937 (aa)--
ENSKMAT00000006568-3013-ENSKMAP00000006460939 (aa)--
ENSKMAT00000006531-2938XM_017415589ENSKMAP00000006423914 (aa)XP_017271078UPI0007F8A923
ENSKMAT00000006627-1971-ENSKMAP00000006519656 (aa)--
Gene Model
Click here to download ENSKMAG00000004863's gene model file
Pathways
Pathway IDPathway NameSource
kmr03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000004863's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000004863cnot3a10079.602ENSKMAG00000018723cnot3b10065.602
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000004863cnot3a7187.108ENSG00000088038CNOT310093.814Homo_sapiens
ENSKMAG00000004863cnot3a7589.324ENSAPOG00000015499CNOT39289.680Acanthochromis_polyacanthus
ENSKMAG00000004863cnot3a9661.158ENSAPOG00000015002cnot3b7689.170Acanthochromis_polyacanthus
ENSKMAG00000004863cnot3a7187.456ENSAMEG00000004528CNOT38590.164Ailuropoda_melanoleuca
ENSKMAG00000004863cnot3a10088.865ENSACIG00000006635cnot3a100100.000Amphilophus_citrinellus
ENSKMAG00000004863cnot3a6591.630ENSACIG00000003652cnot3b9985.772Amphilophus_citrinellus
ENSKMAG00000004863cnot3a9683.500ENSAOCG00000018385-10076.786Amphiprion_ocellaris
ENSKMAG00000004863cnot3a8492.899ENSAOCG00000023769cnot3a9986.564Amphiprion_ocellaris
ENSKMAG00000004863cnot3a9683.500ENSAPEG00000002640cnot3b10085.593Amphiprion_percula
ENSKMAG00000004863cnot3a8592.899ENSAPEG00000006624cnot3a10088.865Amphiprion_percula
ENSKMAG00000004863cnot3a9686.232ENSATEG00000015777cnot3b10065.190Anabas_testudineus
ENSKMAG00000004863cnot3a10089.520ENSATEG00000022737cnot3a10088.974Anabas_testudineus
ENSKMAG00000004863cnot3a10062.500ENSACAG00000016085CNOT38989.836Anolis_carolinensis
ENSKMAG00000004863cnot3a7588.424ENSANAG00000025756CNOT38589.836Aotus_nancymaae
ENSKMAG00000004863cnot3a10080.100ENSACLG00000016702cnot3b10064.856Astatotilapia_calliptera
ENSKMAG00000004863cnot3a10091.048ENSACLG00000021136cnot3a10091.048Astatotilapia_calliptera
ENSKMAG00000004863cnot3a10072.912ENSAMXG00000012359cnot3a10073.106Astyanax_mexicanus
ENSKMAG00000004863cnot3a10070.902ENSAMXG00000009447cnot3b9989.189Astyanax_mexicanus
ENSKMAG00000004863cnot3a8881.388ENSBTAG00000014900CNOT38689.836Bos_taurus
ENSKMAG00000004863cnot3a7187.108ENSCJAG00000001094CNOT38589.836Callithrix_jacchus
ENSKMAG00000004863cnot3a8185.870ENSCAFG00000002699CNOT38589.836Canis_familiaris
ENSKMAG00000004863cnot3a8185.870ENSCAFG00020018359CNOT38589.836Canis_lupus_dingo
ENSKMAG00000004863cnot3a8185.326ENSCHIG00000015302CNOT37787.829Capra_hircus
ENSKMAG00000004863cnot3a7187.108ENSTSYG00000008058CNOT38589.836Carlito_syrichta
ENSKMAG00000004863cnot3a8285.870ENSCAPG00000009533CNOT36585.870Cavia_aperea
ENSKMAG00000004863cnot3a7990.964ENSCPOG00000020741CNOT38589.836Cavia_porcellus
ENSKMAG00000004863cnot3a7187.108ENSCCAG00000036290CNOT38589.836Cebus_capucinus
ENSKMAG00000004863cnot3a7187.108ENSCATG00000030324CNOT38589.836Cercocebus_atys
ENSKMAG00000004863cnot3a7488.746ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSKMAG00000004863cnot3a7187.108ENSCSAG00000001900CNOT38589.836Chlorocebus_sabaeus
ENSKMAG00000004863cnot3a10062.791ENSCPBG00000011655CNOT38989.508Chrysemys_picta_bellii
ENSKMAG00000004863cnot3a10049.713ENSCING00000000293-7267.769Ciona_intestinalis
ENSKMAG00000004863cnot3a7585.870ENSCANG00000013408CNOT38589.836Colobus_angolensis_palliatus
ENSKMAG00000004863cnot3a8284.783ENSCGRG00001000855Cnot38590.164Cricetulus_griseus_chok1gshd
ENSKMAG00000004863cnot3a5869.302ENSCGRG00000012929Cnot36969.302Cricetulus_griseus_crigri
ENSKMAG00000004863cnot3a10088.350ENSCSEG00000003574cnot3a10088.350Cynoglossus_semilaevis
ENSKMAG00000004863cnot3a10079.677ENSCSEG00000016892cnot3b8687.500Cynoglossus_semilaevis
ENSKMAG00000004863cnot3a10097.006ENSCVAG00000008168cnot3a10088.840Cyprinodon_variegatus
ENSKMAG00000004863cnot3a10079.208ENSCVAG00000022122cnot3b10062.173Cyprinodon_variegatus
ENSKMAG00000004863cnot3a10073.894ENSDARG00000007135cnot3a10074.138Danio_rerio
ENSKMAG00000004863cnot3a7087.786ENSDARG00000019842cnot3b10066.848Danio_rerio
ENSKMAG00000004863cnot3a7487.108ENSDNOG00000045972CNOT38589.836Dasypus_novemcinctus
ENSKMAG00000004863cnot3a8287.108ENSDORG00000008021Cnot310080.460Dipodomys_ordii
ENSKMAG00000004863cnot3a7562.847FBgn0033029Not35370.940Drosophila_melanogaster
ENSKMAG00000004863cnot3a63100.000ENSETEG00000006305CNOT363100.000Echinops_telfairi
ENSKMAG00000004863cnot3a7874.330ENSEBUG00000010437cnot3a6774.713Eptatretus_burgeri
ENSKMAG00000004863cnot3a7187.108ENSEASG00005021591CNOT38489.836Equus_asinus_asinus
ENSKMAG00000004863cnot3a7187.108ENSECAG00000023181CNOT38489.836Equus_caballus
ENSKMAG00000004863cnot3a9994.578ENSELUG00000014743cnot3a10078.959Esox_lucius
ENSKMAG00000004863cnot3a10081.159ENSELUG00000000953cnot3b10066.172Esox_lucius
ENSKMAG00000004863cnot3a8885.870ENSFCAG00000014042CNOT38589.836Felis_catus
ENSKMAG00000004863cnot3a10089.674ENSFHEG00000023166cnot3a9798.718Fundulus_heteroclitus
ENSKMAG00000004863cnot3a10078.218ENSFHEG00000001696cnot3b10062.881Fundulus_heteroclitus
ENSKMAG00000004863cnot3a9477.791ENSGMOG00000005365cnot3a9876.640Gadus_morhua
ENSKMAG00000004863cnot3a10087.199ENSGAFG00000013094cnot3a10087.459Gambusia_affinis
ENSKMAG00000004863cnot3a10079.208ENSGAFG00000003459cnot3b10063.455Gambusia_affinis
ENSKMAG00000004863cnot3a9479.027ENSGACG00000011489cnot3a9878.795Gasterosteus_aculeatus
ENSKMAG00000004863cnot3a9186.726ENSGACG00000009395cnot3b5286.726Gasterosteus_aculeatus
ENSKMAG00000004863cnot3a9963.525ENSGAGG00000012677CNOT39786.697Gopherus_agassizii
ENSKMAG00000004863cnot3a7187.108ENSGGOG00000012996CNOT38589.836Gorilla_gorilla
ENSKMAG00000004863cnot3a10091.157ENSHBUG00000005275cnot3a10091.157Haplochromis_burtoni
ENSKMAG00000004863cnot3a9980.100ENSHBUG00000019699cnot3b7980.597Haplochromis_burtoni
ENSKMAG00000004863cnot3a7585.326ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSKMAG00000004863cnot3a6483.908ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSKMAG00000004863cnot3a9895.783ENSHCOG00000020968cnot3a10084.004Hippocampus_comes
ENSKMAG00000004863cnot3a10078.392ENSIPUG00000000167cnot39577.157Ictalurus_punctatus
ENSKMAG00000004863cnot3a10088.690ENSIPUG00000009046cnot3b7488.690Ictalurus_punctatus
ENSKMAG00000004863cnot3a7187.108ENSSTOG00000028248CNOT38589.836Ictidomys_tridecemlineatus
ENSKMAG00000004863cnot3a7287.456ENSJJAG00000014594Cnot310080.460Jaculus_jaculus
ENSKMAG00000004863cnot3a9580.357ENSLBEG00000018278cnot3b7290.196Labrus_bergylta
ENSKMAG00000004863cnot3a10080.705ENSLBEG00000017296cnot3a9793.213Labrus_bergylta
ENSKMAG00000004863cnot3a8779.811ENSLACG00000009742CNOT38988.197Latimeria_chalumnae
ENSKMAG00000004863cnot3a7292.814ENSLOCG00000000005cnot3b7991.503Lepisosteus_oculatus
ENSKMAG00000004863cnot3a6888.141ENSLAFG00000022133CNOT37089.542Loxodonta_africana
ENSKMAG00000004863cnot3a7187.108ENSMFAG00000040073CNOT38589.836Macaca_fascicularis
ENSKMAG00000004863cnot3a6393.162ENSMMUG00000009698CNOT310095.098Macaca_mulatta
ENSKMAG00000004863cnot3a7187.108ENSMNEG00000036750CNOT38589.836Macaca_nemestrina
ENSKMAG00000004863cnot3a7187.108ENSMLEG00000036579CNOT38489.836Mandrillus_leucophaeus
ENSKMAG00000004863cnot3a10090.217ENSMAMG00000019397cnot3a10089.410Mastacembelus_armatus
ENSKMAG00000004863cnot3a10081.095ENSMAMG00000019357cnot3b10064.656Mastacembelus_armatus
ENSKMAG00000004863cnot3a10080.100ENSMZEG00005002466cnot3b10065.705Maylandia_zebra
ENSKMAG00000004863cnot3a10091.048ENSMZEG00005016304cnot3a10091.048Maylandia_zebra
ENSKMAG00000004863cnot3a8284.783ENSMAUG00000014996Cnot39690.164Mesocricetus_auratus
ENSKMAG00000004863cnot3a7187.108ENSMICG00000002370CNOT38489.836Microcebus_murinus
ENSKMAG00000004863cnot3a70100.000ENSMOCG00000013249Cnot363100.000Microtus_ochrogaster
ENSKMAG00000004863cnot3a6090.171ENSMMOG00000013086cnot3b10085.944Mola_mola
ENSKMAG00000004863cnot3a10085.930ENSMMOG00000016446cnot3a10085.496Mola_mola
ENSKMAG00000004863cnot3a7187.108ENSMODG00000004066CNOT37389.836Monodelphis_domestica
ENSKMAG00000004863cnot3a10087.555ENSMALG00000009204cnot3a10087.445Monopterus_albus
ENSKMAG00000004863cnot3a7384.698ENSMALG00000004936cnot3b7486.532Monopterus_albus
ENSKMAG00000004863cnot3a6990.361MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSKMAG00000004863cnot3a6990.361ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSKMAG00000004863cnot3a7990.361MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSKMAG00000004863cnot3a6990.361MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSKMAG00000004863cnot3a7585.870ENSMPUG00000010352CNOT38589.836Mustela_putorius_furo
ENSKMAG00000004863cnot3a7585.870ENSNGAG00000013266Cnot39689.836Nannospalax_galili
ENSKMAG00000004863cnot3a8679.179ENSNBRG00000003336cnot3b9789.823Neolamprologus_brichardi
ENSKMAG00000004863cnot3a10090.217ENSNBRG00000002401cnot3a10089.083Neolamprologus_brichardi
ENSKMAG00000004863cnot3a6888.424ENSNLEG00000006272CNOT36790.964Nomascus_leucogenys
ENSKMAG00000004863cnot3a54100.000ENSOPRG00000001605-63100.000Ochotona_princeps
ENSKMAG00000004863cnot3a7187.108ENSODEG00000000705CNOT310088.608Octodon_degus
ENSKMAG00000004863cnot3a10090.611ENSONIG00000006568cnot3a10090.939Oreochromis_niloticus
ENSKMAG00000004863cnot3a10081.095ENSONIG00000007047cnot3b10065.895Oreochromis_niloticus
ENSKMAG00000004863cnot3a8285.870ENSOCUG00000007691CNOT38589.836Oryctolagus_cuniculus
ENSKMAG00000004863cnot3a7088.462ENSORLG00000005982cnot3b10065.948Oryzias_latipes
ENSKMAG00000004863cnot3a10097.024ENSORLG00000011174cnot3a10087.555Oryzias_latipes
ENSKMAG00000004863cnot3a10065.409ENSORLG00020005779cnot3b5088.462Oryzias_latipes_hni
ENSKMAG00000004863cnot3a10097.024ENSORLG00020008009cnot3a10087.991Oryzias_latipes_hni
ENSKMAG00000004863cnot3a10097.024ENSORLG00015013729cnot3a10087.991Oryzias_latipes_hsok
ENSKMAG00000004863cnot3a7088.462ENSORLG00015019021cnot3b7781.592Oryzias_latipes_hsok
ENSKMAG00000004863cnot3a10089.083ENSOMEG00000010309cnot3a9198.824Oryzias_melastigma
ENSKMAG00000004863cnot3a10092.857ENSOMEG00000015557cnot3b7392.857Oryzias_melastigma
ENSKMAG00000004863cnot3a8285.870ENSOGAG00000006945CNOT38589.836Otolemur_garnettii
ENSKMAG00000004863cnot3a10043.040ENSOARG00000002981CNOT36991.444Ovis_aries
ENSKMAG00000004863cnot3a7187.108ENSPPAG00000002748CNOT38589.836Pan_paniscus
ENSKMAG00000004863cnot3a8885.870ENSPPRG00000011705CNOT38589.836Panthera_pardus
ENSKMAG00000004863cnot3a7287.108ENSPTIG00000008781CNOT39788.562Panthera_tigris_altaica
ENSKMAG00000004863cnot3a7187.108ENSPTRG00000011444CNOT38589.836Pan_troglodytes
ENSKMAG00000004863cnot3a7187.108ENSPTRG00000046717-8589.836Pan_troglodytes
ENSKMAG00000004863cnot3a7187.108ENSPANG00000009375CNOT38589.836Papio_anubis
ENSKMAG00000004863cnot3a9992.216ENSPKIG00000011733CNOT37682.741Paramormyrops_kingsleyae
ENSKMAG00000004863cnot3a7494.872ENSPKIG00000015967-10089.020Paramormyrops_kingsleyae
ENSKMAG00000004863cnot3a9776.238ENSPMGG00000022539cnot3b9959.511Periophthalmus_magnuspinnatus
ENSKMAG00000004863cnot3a8285.326ENSPEMG00000024185Cnot38590.164Peromyscus_maniculatus_bairdii
ENSKMAG00000004863cnot3a10062.143ENSPCIG00000023018CNOT39689.508Phascolarctos_cinereus
ENSKMAG00000004863cnot3a10089.410ENSPFOG00000008693cnot3a9596.078Poecilia_formosa
ENSKMAG00000004863cnot3a10079.208ENSPFOG00000007168cnot3b10062.683Poecilia_formosa
ENSKMAG00000004863cnot3a10088.210ENSPLAG00000013324cnot3a10087.350Poecilia_latipinna
ENSKMAG00000004863cnot3a10079.208ENSPLAG00000013457cnot3b10062.683Poecilia_latipinna
ENSKMAG00000004863cnot3a10090.284ENSPMEG00000017718cnot3a10088.100Poecilia_mexicana
ENSKMAG00000004863cnot3a10079.703ENSPMEG00000010184cnot3b10063.252Poecilia_mexicana
ENSKMAG00000004863cnot3a10090.761ENSPREG00000007592cnot3a10095.142Poecilia_reticulata
ENSKMAG00000004863cnot3a9880.198ENSPREG00000000662cnot3b8176.471Poecilia_reticulata
ENSKMAG00000004863cnot3a7186.760ENSPPYG00000010372CNOT38589.508Pongo_abelii
ENSKMAG00000004863cnot3a7292.373ENSPCAG00000011999CNOT35692.373Procavia_capensis
ENSKMAG00000004863cnot3a7187.108ENSPCOG00000017673CNOT38489.836Propithecus_coquereli
ENSKMAG00000004863cnot3a7584.783ENSPVAG00000015564CNOT38589.508Pteropus_vampyrus
ENSKMAG00000004863cnot3a10091.266ENSPNYG00000002282cnot3a10091.266Pundamilia_nyererei
ENSKMAG00000004863cnot3a9970.149ENSPNYG00000003358cnot3b9959.936Pundamilia_nyererei
ENSKMAG00000004863cnot3a10073.476ENSPNAG00000017679cnot3a10071.792Pygocentrus_nattereri
ENSKMAG00000004863cnot3a10093.373ENSPNAG00000027459cnot3b10068.143Pygocentrus_nattereri
ENSKMAG00000004863cnot3a6990.361ENSRNOG00000053234Cnot38590.164Rattus_norvegicus
ENSKMAG00000004863cnot3a8285.870ENSRBIG00000031025CNOT38589.836Rhinopithecus_bieti
ENSKMAG00000004863cnot3a8285.870ENSRROG00000003872CNOT36585.870Rhinopithecus_roxellana
ENSKMAG00000004863cnot3a7588.424ENSSBOG00000030268CNOT38589.836Saimiri_boliviensis_boliviensis
ENSKMAG00000004863cnot3a10081.159ENSSFOG00015000248cnot310069.399Scleropages_formosus
ENSKMAG00000004863cnot3a10092.814ENSSFOG00015019203-7292.814Scleropages_formosus
ENSKMAG00000004863cnot3a10090.087ENSSMAG00000013235cnot3a10090.632Scophthalmus_maximus
ENSKMAG00000004863cnot3a10090.698ENSSMAG00000016031cnot3b10064.700Scophthalmus_maximus
ENSKMAG00000004863cnot3a10081.159ENSSDUG00000003428cnot3b10066.667Seriola_dumerili
ENSKMAG00000004863cnot3a10088.889ENSSDUG00000008181cnot3a10099.573Seriola_dumerili
ENSKMAG00000004863cnot3a9690.950ENSSLDG00000014733cnot3a9991.403Seriola_lalandi_dorsalis
ENSKMAG00000004863cnot3a10081.159ENSSLDG00000014376cnot3b10066.459Seriola_lalandi_dorsalis
ENSKMAG00000004863cnot3a10061.937ENSSPUG00000008510CNOT38989.836Sphenodon_punctatus
ENSKMAG00000004863cnot3a8997.872ENSSPAG00000003858cnot3a9397.872Stegastes_partitus
ENSKMAG00000004863cnot3a10083.500ENSSPAG00000001429cnot3b10066.419Stegastes_partitus
ENSKMAG00000004863cnot3a7187.108ENSSSCG00000003264CNOT38489.836Sus_scrofa
ENSKMAG00000004863cnot3a8681.188ENSTRUG00000007248cnot3b6792.169Takifugu_rubripes
ENSKMAG00000004863cnot3a10087.418ENSTRUG00000015732cnot3a10087.199Takifugu_rubripes
ENSKMAG00000004863cnot3a9482.659ENSTNIG00000008082cnot3a10081.850Tetraodon_nigroviridis
ENSKMAG00000004863cnot3a9271.141ENSTNIG00000005663cnot3b7571.141Tetraodon_nigroviridis
ENSKMAG00000004863cnot3a5593.985ENSTBEG00000009620-5493.985Tupaia_belangeri
ENSKMAG00000004863cnot3a7287.456ENSUAMG00000005234CNOT38590.164Ursus_americanus
ENSKMAG00000004863cnot3a10060.322ENSUMAG00000010934CNOT38992.857Ursus_maritimus
ENSKMAG00000004863cnot3a5693.396ENSVPAG00000001320-5093.396Vicugna_pacos
ENSKMAG00000004863cnot3a8185.792ENSVVUG00000008239CNOT38489.836Vulpes_vulpes
ENSKMAG00000004863cnot3a9885.824ENSXETG00000003166cnot38989.032Xenopus_tropicalis
ENSKMAG00000004863cnot3a9562.885ENSXCOG00000018976cnot3b9959.716Xiphophorus_couchianus
ENSKMAG00000004863cnot3a10090.761ENSXCOG00000019460cnot3a9999.145Xiphophorus_couchianus
ENSKMAG00000004863cnot3a10079.703ENSXMAG00000014176cnot3b10062.137Xiphophorus_maculatus
ENSKMAG00000004863cnot3a10087.199ENSXMAG00000012273cnot3a10087.459Xiphophorus_maculatus

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