EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000005077 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 22567 bases
Position: chrLWHD01000004.1:9292715-9315281
Accession: 108245014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000006718	zf-met	PF12874.7	3.6e-27	1	4
ENSKMAP00000006718	zf-met	PF12874.7	3.6e-27	2	4
ENSKMAP00000006718	zf-met	PF12874.7	3.6e-27	3	4
ENSKMAP00000006718	zf-met	PF12874.7	3.6e-27	4	4
ENSKMAP00000006718	zf-C2H2_jaz	PF12171.8	9.8e-21	1	2
ENSKMAP00000006718	zf-C2H2_jaz	PF12171.8	9.8e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000006826	-	765	XM_017431640	ENSKMAP00000006718	254 (aa)	XP_017287129	-

Gene Model

Click here to download ENSKMAG00000005077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000005077	zgc:171482	83	43.119	ENSKMAG00000018586	znf346	71	43.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005077	zgc:171482	86	90.367	ENSAPOG00000019970	zgc:171482	100	90.367	Acanthochromis_polyacanthus
ENSKMAG00000005077	zgc:171482	68	98.291	ENSACIG00000021512	zgc:171482	87	98.291	Amphilophus_citrinellus
ENSKMAG00000005077	zgc:171482	68	95.968	ENSAOCG00000000751	zgc:171482	91	95.968	Amphiprion_ocellaris
ENSKMAG00000005077	zgc:171482	68	89.630	ENSAPEG00000014154	zgc:171482	97	89.630	Amphiprion_percula
ENSKMAG00000005077	zgc:171482	86	86.607	ENSATEG00000001371	zgc:171482	100	87.336	Anabas_testudineus
ENSKMAG00000005077	zgc:171482	68	95.200	ENSACLG00000010511	zgc:171482	87	95.200	Astatotilapia_calliptera
ENSKMAG00000005077	zgc:171482	86	83.182	ENSAMXG00000002299	zgc:171482	100	83.482	Astyanax_mexicanus
ENSKMAG00000005077	zgc:171482	86	74.847	ENSCSEG00000006509	zgc:171482	99	74.847	Cynoglossus_semilaevis
ENSKMAG00000005077	zgc:171482	86	86.784	ENSCVAG00000013606	zgc:171482	100	86.784	Cyprinodon_variegatus
ENSKMAG00000005077	zgc:171482	87	79.661	ENSDARG00000074415	zgc:171482	91	88.525	Danio_rerio
ENSKMAG00000005077	zgc:171482	68	91.803	ENSELUG00000021817	zgc:171482	96	87.970	Esox_lucius
ENSKMAG00000005077	zgc:171482	69	68.750	ENSELUG00000017517	-	60	83.333	Esox_lucius
ENSKMAG00000005077	zgc:171482	76	96.000	ENSFHEG00000002233	zgc:171482	89	96.000	Fundulus_heteroclitus
ENSKMAG00000005077	zgc:171482	86	86.036	ENSGMOG00000010508	zgc:171482	100	86.036	Gadus_morhua
ENSKMAG00000005077	zgc:171482	86	97.500	ENSGAFG00000009398	zgc:171482	99	76.687	Gambusia_affinis
ENSKMAG00000005077	zgc:171482	86	85.776	ENSGACG00000007680	zgc:171482	100	85.776	Gasterosteus_aculeatus
ENSKMAG00000005077	zgc:171482	68	95.200	ENSHBUG00000023289	zgc:171482	94	95.200	Haplochromis_burtoni
ENSKMAG00000005077	zgc:171482	68	89.683	ENSHCOG00000018086	zgc:171482	94	89.683	Hippocampus_comes
ENSKMAG00000005077	zgc:171482	68	94.017	ENSIPUG00000000361	zgc:171482	85	94.017	Ictalurus_punctatus
ENSKMAG00000005077	zgc:171482	68	92.913	ENSLBEG00000023823	zgc:171482	91	92.913	Labrus_bergylta
ENSKMAG00000005077	zgc:171482	88	78.879	ENSLOCG00000008863	zgc:171482	99	79.832	Lepisosteus_oculatus
ENSKMAG00000005077	zgc:171482	89	95.200	ENSMAMG00000001031	zgc:171482	79	95.200	Mastacembelus_armatus
ENSKMAG00000005077	zgc:171482	86	83.628	ENSMZEG00005027721	zgc:171482	100	83.628	Maylandia_zebra
ENSKMAG00000005077	zgc:171482	74	94.531	ENSMMOG00000010523	zgc:171482	98	94.531	Mola_mola
ENSKMAG00000005077	zgc:171482	86	84.716	ENSMALG00000017883	zgc:171482	100	85.153	Monopterus_albus
ENSKMAG00000005077	zgc:171482	68	94.215	ENSNBRG00000021035	zgc:171482	90	94.215	Neolamprologus_brichardi
ENSKMAG00000005077	zgc:171482	85	87.225	ENSONIG00000018365	zgc:171482	98	87.225	Oreochromis_niloticus
ENSKMAG00000005077	zgc:171482	86	85.022	ENSORLG00000007607	zgc:171482	100	85.022	Oryzias_latipes
ENSKMAG00000005077	zgc:171482	86	81.659	ENSORLG00020003563	zgc:171482	100	81.659	Oryzias_latipes_hni
ENSKMAG00000005077	zgc:171482	86	85.022	ENSORLG00015008552	zgc:171482	100	85.022	Oryzias_latipes_hsok
ENSKMAG00000005077	zgc:171482	79	94.400	ENSOMEG00000003526	zgc:171482	88	94.400	Oryzias_melastigma
ENSKMAG00000005077	zgc:171482	68	90.909	ENSPKIG00000016244	zgc:171482	84	87.288	Paramormyrops_kingsleyae
ENSKMAG00000005077	zgc:171482	74	94.828	ENSPKIG00000015911	-	81	94.828	Paramormyrops_kingsleyae
ENSKMAG00000005077	zgc:171482	85	83.128	ENSPMGG00000020230	zgc:171482	100	83.128	Periophthalmus_magnuspinnatus
ENSKMAG00000005077	zgc:171482	87	86.008	ENSPFOG00000001974	zgc:171482	98	86.008	Poecilia_formosa
ENSKMAG00000005077	zgc:171482	86	91.743	ENSPLAG00000003327	zgc:171482	100	91.743	Poecilia_latipinna
ENSKMAG00000005077	zgc:171482	87	96.800	ENSPMEG00000004988	zgc:171482	100	86.301	Poecilia_mexicana
ENSKMAG00000005077	zgc:171482	76	95.276	ENSPREG00000019241	zgc:171482	92	95.276	Poecilia_reticulata
ENSKMAG00000005077	zgc:171482	68	95.200	ENSPNYG00000007773	zgc:171482	87	95.200	Pundamilia_nyererei
ENSKMAG00000005077	zgc:171482	85	79.913	ENSPNAG00000007619	zgc:171482	97	80.000	Pygocentrus_nattereri
ENSKMAG00000005077	zgc:171482	75	80.597	ENSSFOG00015021238	zgc:171482	88	81.618	Scleropages_formosus
ENSKMAG00000005077	zgc:171482	68	88.889	ENSSFOG00015016149	zgc:171482	94	88.889	Scleropages_formosus
ENSKMAG00000005077	zgc:171482	68	90.909	ENSSMAG00000002715	zgc:171482	85	90.909	Scophthalmus_maximus
ENSKMAG00000005077	zgc:171482	68	96.800	ENSSDUG00000008773	zgc:171482	88	96.800	Seriola_dumerili
ENSKMAG00000005077	zgc:171482	68	96.800	ENSSLDG00000019510	zgc:171482	88	96.800	Seriola_lalandi_dorsalis
ENSKMAG00000005077	zgc:171482	68	95.968	ENSSPAG00000013724	zgc:171482	98	95.968	Stegastes_partitus
ENSKMAG00000005077	zgc:171482	72	93.220	ENSTRUG00000005705	zgc:171482	70	93.220	Takifugu_rubripes
ENSKMAG00000005077	zgc:171482	86	73.684	ENSTNIG00000008679	zgc:171482	100	73.684	Tetraodon_nigroviridis
ENSKMAG00000005077	zgc:171482	72	58.696	ENSXETG00000013525	zmat4	89	58.696	Xenopus_tropicalis
ENSKMAG00000005077	zgc:171482	86	86.777	ENSXMAG00000002641	zgc:171482	100	68.902	Xiphophorus_maculatus