EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000005539 (Gene tree)
Gene ID: -
Gene Symbol: rrp1
Alias: Nop52|cb43|nnp1|sb:cb43|wu:fb37f12|wu:fi05d01
Full Name: ribosomal RNA processing protein 1 homolog B-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 14245 bases
Position: chrLWHD01000016.1:4257517-4271761
Accession: 108232336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000007355	Nop52	PF05997.12	2.9e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000007473	-	2416	XM_017410072	ENSKMAP00000007355	680 (aa)	XP_017265561	-

Gene Model

Click here to download ENSKMAG00000005539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005539	rrp1	75	46.358	ENSG00000160208	RRP1B	64	46.761	Homo_sapiens
ENSKMAG00000005539	rrp1	51	48.696	ENSG00000160214	RRP1	80	58.333	Homo_sapiens
ENSKMAG00000005539	rrp1	89	65.789	ENSAPOG00000007490	-	63	65.796	Acanthochromis_polyacanthus
ENSKMAG00000005539	rrp1	51	48.406	ENSAMEG00000011448	RRP1	73	47.839	Ailuropoda_melanoleuca
ENSKMAG00000005539	rrp1	72	47.581	ENSAMEG00000011401	RRP1B	61	49.206	Ailuropoda_melanoleuca
ENSKMAG00000005539	rrp1	71	48.560	ENSACIG00000019121	rrp1	94	45.809	Amphilophus_citrinellus
ENSKMAG00000005539	rrp1	87	63.318	ENSAOCG00000017894	-	99	73.333	Amphiprion_ocellaris
ENSKMAG00000005539	rrp1	99	63.915	ENSAPEG00000024150	-	69	62.704	Amphiprion_percula
ENSKMAG00000005539	rrp1	80	70.649	ENSATEG00000005045	-	58	69.952	Anabas_testudineus
ENSKMAG00000005539	rrp1	67	51.775	ENSAPLG00000004310	RRP1B	61	51.613	Anas_platyrhynchos
ENSKMAG00000005539	rrp1	93	46.565	ENSACAG00000017851	RRP1B	59	48.011	Anolis_carolinensis
ENSKMAG00000005539	rrp1	76	45.161	ENSANAG00000034889	RRP1B	64	46.154	Aotus_nancymaae
ENSKMAG00000005539	rrp1	50	48.538	ENSANAG00000037815	RRP1	75	48.538	Aotus_nancymaae
ENSKMAG00000005539	rrp1	71	49.180	ENSBTAG00000017418	RRP1B	61	49.180	Bos_taurus
ENSKMAG00000005539	rrp1	51	47.826	ENSBTAG00000003981	RRP1	74	46.957	Bos_taurus
ENSKMAG00000005539	rrp1	51	48.406	ENSCJAG00000043205	RRP1	68	47.826	Callithrix_jacchus
ENSKMAG00000005539	rrp1	51	49.855	ENSCAFG00000010646	RRP1	79	45.431	Canis_familiaris
ENSKMAG00000005539	rrp1	66	47.200	ENSCAFG00000010621	RRP1B	59	49.194	Canis_familiaris
ENSKMAG00000005539	rrp1	51	49.855	ENSCAFG00020018979	RRP1	73	49.855	Canis_lupus_dingo
ENSKMAG00000005539	rrp1	73	47.581	ENSCAFG00020018901	RRP1B	63	49.194	Canis_lupus_dingo
ENSKMAG00000005539	rrp1	55	44.086	ENSCHIG00000021519	RRP1B	62	49.206	Capra_hircus
ENSKMAG00000005539	rrp1	51	46.686	ENSCHIG00000020948	RRP1	74	46.087	Capra_hircus
ENSKMAG00000005539	rrp1	71	44.262	ENSCPOG00000002396	RRP1B	62	47.200	Cavia_porcellus
ENSKMAG00000005539	rrp1	51	47.826	ENSCPOG00000038986	RRP1	73	47.536	Cavia_porcellus
ENSKMAG00000005539	rrp1	76	45.806	ENSCCAG00000029384	RRP1B	64	45.806	Cebus_capucinus
ENSKMAG00000005539	rrp1	51	48.696	ENSCCAG00000029828	RRP1	72	48.406	Cebus_capucinus
ENSKMAG00000005539	rrp1	73	49.587	ENSCATG00000017423	RRP1B	61	49.624	Cercocebus_atys
ENSKMAG00000005539	rrp1	51	48.986	ENSCATG00000015632	RRP1	72	48.986	Cercocebus_atys
ENSKMAG00000005539	rrp1	51	48.415	ENSCLAG00000011639	RRP1	73	48.406	Chinchilla_lanigera
ENSKMAG00000005539	rrp1	70	48.413	ENSCLAG00000005622	RRP1B	60	48.413	Chinchilla_lanigera
ENSKMAG00000005539	rrp1	73	52.000	ENSCSAG00000007961	RRP1B	61	51.825	Chlorocebus_sabaeus
ENSKMAG00000005539	rrp1	51	39.655	ENSCHOG00000002426	-	55	38.793	Choloepus_hoffmanni
ENSKMAG00000005539	rrp1	80	52.291	ENSCPBG00000010310	RRP1B	61	51.429	Chrysemys_picta_bellii
ENSKMAG00000005539	rrp1	54	34.946	ENSCING00000003304	-	58	44.872	Ciona_intestinalis
ENSKMAG00000005539	rrp1	77	46.032	ENSCANG00000040952	RRP1B	64	46.761	Colobus_angolensis_palliatus
ENSKMAG00000005539	rrp1	51	48.986	ENSCGRG00001011920	Rrp1	75	48.571	Cricetulus_griseus_chok1gshd
ENSKMAG00000005539	rrp1	53	43.646	ENSCGRG00001010889	-	60	47.899	Cricetulus_griseus_chok1gshd
ENSKMAG00000005539	rrp1	53	43.094	ENSCGRG00001023882	-	60	58.824	Cricetulus_griseus_chok1gshd
ENSKMAG00000005539	rrp1	51	48.986	ENSCGRG00000008915	Rrp1	75	48.571	Cricetulus_griseus_crigri
ENSKMAG00000005539	rrp1	100	48.686	ENSCSEG00000020711	-	98	60.482	Cynoglossus_semilaevis
ENSKMAG00000005539	rrp1	58	63.659	ENSCVAG00000017568	-	97	64.160	Cyprinodon_variegatus
ENSKMAG00000005539	rrp1	51	47.826	ENSDNOG00000019880	RRP1	73	47.246	Dasypus_novemcinctus
ENSKMAG00000005539	rrp1	59	48.837	ENSDORG00000005496	Rrp1b	57	49.219	Dipodomys_ordii
ENSKMAG00000005539	rrp1	65	57.831	ENSETEG00000019489	RRP1B	55	60.000	Echinops_telfairi
ENSKMAG00000005539	rrp1	73	50.400	ENSEASG00005001687	RRP1B	61	50.400	Equus_asinus_asinus
ENSKMAG00000005539	rrp1	66	41.648	ENSEASG00005001673	RRP1	75	48.563	Equus_asinus_asinus
ENSKMAG00000005539	rrp1	66	41.871	ENSECAG00000015703	RRP1	75	48.851	Equus_caballus
ENSKMAG00000005539	rrp1	73	50.400	ENSECAG00000018018	RRP1B	61	50.400	Equus_caballus
ENSKMAG00000005539	rrp1	88	60.142	ENSELUG00000015885	-	92	58.333	Esox_lucius
ENSKMAG00000005539	rrp1	73	49.219	ENSFCAG00000010272	RRP1B	62	49.206	Felis_catus
ENSKMAG00000005539	rrp1	51	48.696	ENSFCAG00000008434	RRP1	73	48.415	Felis_catus
ENSKMAG00000005539	rrp1	68	48.110	ENSFALG00000002024	RRP1B	61	46.075	Ficedula_albicollis
ENSKMAG00000005539	rrp1	65	39.686	ENSFDAG00000013728	RRP1	73	48.406	Fukomys_damarensis
ENSKMAG00000005539	rrp1	68	46.774	ENSFDAG00000010899	RRP1B	59	47.656	Fukomys_damarensis
ENSKMAG00000005539	rrp1	84	69.388	ENSFHEG00000016314	-	66	69.133	Fundulus_heteroclitus
ENSKMAG00000005539	rrp1	82	58.005	ENSGMOG00000001953	-	73	57.881	Gadus_morhua
ENSKMAG00000005539	rrp1	81	50.400	ENSGALG00000035696	RRP1B	63	50.286	Gallus_gallus
ENSKMAG00000005539	rrp1	100	53.219	ENSGACG00000001438	rrp1	59	63.342	Gasterosteus_aculeatus
ENSKMAG00000005539	rrp1	81	51.613	ENSGAGG00000000375	RRP1B	63	50.857	Gopherus_agassizii
ENSKMAG00000005539	rrp1	51	48.986	ENSGGOG00000000173	RRP1	72	48.406	Gorilla_gorilla
ENSKMAG00000005539	rrp1	75	46.358	ENSGGOG00000012069	RRP1B	64	46.761	Gorilla_gorilla
ENSKMAG00000005539	rrp1	76	65.217	ENSHBUG00000003766	-	61	65.152	Haplochromis_burtoni
ENSKMAG00000005539	rrp1	51	46.667	ENSHGLG00000017085	RRP1	70	47.536	Heterocephalus_glaber_female
ENSKMAG00000005539	rrp1	78	47.200	ENSHGLG00000004968	RRP1B	61	45.902	Heterocephalus_glaber_female
ENSKMAG00000005539	rrp1	68	47.200	ENSHGLG00100002232	RRP1B	53	45.902	Heterocephalus_glaber_male
ENSKMAG00000005539	rrp1	82	57.920	ENSHCOG00000018388	-	65	57.920	Hippocampus_comes
ENSKMAG00000005539	rrp1	71	57.983	ENSIPUG00000000673	-	67	59.104	Ictalurus_punctatus
ENSKMAG00000005539	rrp1	51	48.266	ENSSTOG00000011116	RRP1	75	47.977	Ictidomys_tridecemlineatus
ENSKMAG00000005539	rrp1	70	48.000	ENSSTOG00000011790	RRP1B	60	48.000	Ictidomys_tridecemlineatus
ENSKMAG00000005539	rrp1	51	49.275	ENSJJAG00000018886	Rrp1	74	48.711	Jaculus_jaculus
ENSKMAG00000005539	rrp1	70	47.183	ENSJJAG00000021279	Rrp1b	64	47.183	Jaculus_jaculus
ENSKMAG00000005539	rrp1	54	66.125	ENSLBEG00000021417	RRP1	99	64.987	Labrus_bergylta
ENSKMAG00000005539	rrp1	76	47.150	ENSLACG00000017332	-	64	47.863	Latimeria_chalumnae
ENSKMAG00000005539	rrp1	54	56.164	ENSLOCG00000004064	-	65	55.172	Lepisosteus_oculatus
ENSKMAG00000005539	rrp1	63	43.953	ENSLAFG00000000766	RRP1B	81	47.175	Loxodonta_africana
ENSKMAG00000005539	rrp1	51	44.944	ENSLAFG00000022901	RRP1	76	45.225	Loxodonta_africana
ENSKMAG00000005539	rrp1	51	49.565	ENSMFAG00000003202	RRP1	72	49.565	Macaca_fascicularis
ENSKMAG00000005539	rrp1	73	50.400	ENSMFAG00000039152	RRP1B	61	50.365	Macaca_fascicularis
ENSKMAG00000005539	rrp1	51	49.275	ENSMMUG00000012304	RRP1	72	49.565	Macaca_mulatta
ENSKMAG00000005539	rrp1	69	52.128	ENSMMUG00000000104	RRP1B	56	56.250	Macaca_mulatta
ENSKMAG00000005539	rrp1	73	48.760	ENSMNEG00000034269	RRP1B	61	48.872	Macaca_nemestrina
ENSKMAG00000005539	rrp1	51	48.986	ENSMNEG00000031210	RRP1	72	48.986	Macaca_nemestrina
ENSKMAG00000005539	rrp1	75	51.200	ENSMLEG00000040044	RRP1B	59	51.095	Mandrillus_leucophaeus
ENSKMAG00000005539	rrp1	93	61.758	ENSMAMG00000007131	-	56	64.439	Mastacembelus_armatus
ENSKMAG00000005539	rrp1	81	50.400	ENSMGAG00000014591	RRP1B	63	50.286	Meleagris_gallopavo
ENSKMAG00000005539	rrp1	51	47.246	ENSMICG00000004700	RRP1	76	46.821	Microcebus_murinus
ENSKMAG00000005539	rrp1	51	41.787	ENSMOCG00000001117	Rrp1b	65	45.695	Microtus_ochrogaster
ENSKMAG00000005539	rrp1	55	61.273	ENSMMOG00000019175	rrp1	95	61.735	Mola_mola
ENSKMAG00000005539	rrp1	51	48.547	ENSMODG00000021036	-	50	49.711	Monodelphis_domestica
ENSKMAG00000005539	rrp1	74	47.814	ENSMODG00000021033	RRP1B	63	47.727	Monodelphis_domestica
ENSKMAG00000005539	rrp1	58	67.758	ENSMALG00000010310	rrp1	99	67.506	Monopterus_albus
ENSKMAG00000005539	rrp1	51	45.361	MGP_CAROLIEiJ_G0015508	Rrp1	79	44.845	Mus_caroli
ENSKMAG00000005539	rrp1	68	47.500	MGP_CAROLIEiJ_G0021376	Rrp1b	58	57.353	Mus_caroli
ENSKMAG00000005539	rrp1	51	45.876	ENSMUSG00000061032	Rrp1	79	45.361	Mus_musculus
ENSKMAG00000005539	rrp1	68	48.361	ENSMUSG00000058392	Rrp1b	58	57.353	Mus_musculus
ENSKMAG00000005539	rrp1	53	41.160	MGP_PahariEiJ_G0023695	Rrp1b	58	55.882	Mus_pahari
ENSKMAG00000005539	rrp1	99	34.506	MGP_SPRETEiJ_G0022290	Rrp1b	58	57.353	Mus_spretus
ENSKMAG00000005539	rrp1	51	43.299	ENSMPUG00000009826	RRP1	79	43.152	Mustela_putorius_furo
ENSKMAG00000005539	rrp1	70	49.650	ENSNGAG00000021073	Rrp1b	63	49.650	Nannospalax_galili
ENSKMAG00000005539	rrp1	51	49.275	ENSNLEG00000034734	RRP1	72	48.696	Nomascus_leucogenys
ENSKMAG00000005539	rrp1	75	46.358	ENSNLEG00000001490	RRP1B	66	46.761	Nomascus_leucogenys
ENSKMAG00000005539	rrp1	55	54.237	ENSMEUG00000003226	-	61	55.556	Notamacropus_eugenii
ENSKMAG00000005539	rrp1	51	41.449	ENSOPRG00000001319	RRP1	90	42.319	Ochotona_princeps
ENSKMAG00000005539	rrp1	72	66.667	ENSONIG00000004264	rrp1	65	66.667	Oreochromis_niloticus
ENSKMAG00000005539	rrp1	51	49.855	ENSOANG00000006472	-	99	45.528	Ornithorhynchus_anatinus
ENSKMAG00000005539	rrp1	71	44.800	ENSOANG00000006470	RRP1B	60	44.800	Ornithorhynchus_anatinus
ENSKMAG00000005539	rrp1	63	47.619	ENSOCUG00000025931	RRP1B	61	47.619	Oryctolagus_cuniculus
ENSKMAG00000005539	rrp1	100	61.244	ENSORLG00020007199	-	65	61.814	Oryzias_latipes_hni
ENSKMAG00000005539	rrp1	100	60.766	ENSORLG00015004425	-	65	61.337	Oryzias_latipes_hsok
ENSKMAG00000005539	rrp1	83	63.659	ENSOMEG00000016910	-	66	64.160	Oryzias_melastigma
ENSKMAG00000005539	rrp1	53	43.802	ENSOGAG00000009872	RRP1B	50	44.509	Otolemur_garnettii
ENSKMAG00000005539	rrp1	52	47.025	ENSOGAG00000006105	RRP1	75	48.986	Otolemur_garnettii
ENSKMAG00000005539	rrp1	63	44.444	ENSOARG00000011314	RRP1B	58	44.444	Ovis_aries
ENSKMAG00000005539	rrp1	69	46.358	ENSPPAG00000035319	RRP1B	61	46.358	Pan_paniscus
ENSKMAG00000005539	rrp1	51	48.696	ENSPPAG00000029050	RRP1	72	48.116	Pan_paniscus
ENSKMAG00000005539	rrp1	73	49.219	ENSPPRG00000010356	RRP1B	62	49.206	Panthera_pardus
ENSKMAG00000005539	rrp1	51	48.986	ENSPPRG00000010656	RRP1	74	48.127	Panthera_pardus
ENSKMAG00000005539	rrp1	66	48.837	ENSPTIG00000016894	RRP1B	70	48.819	Panthera_tigris_altaica
ENSKMAG00000005539	rrp1	75	46.358	ENSPTRG00000013958	RRP1B	64	46.761	Pan_troglodytes
ENSKMAG00000005539	rrp1	51	48.986	ENSPTRG00000013962	RRP1	72	48.406	Pan_troglodytes
ENSKMAG00000005539	rrp1	51	49.565	ENSPANG00000015097	RRP1	72	48.696	Papio_anubis
ENSKMAG00000005539	rrp1	81	50.400	ENSPANG00000011090	RRP1B	60	51.200	Papio_anubis
ENSKMAG00000005539	rrp1	77	56.614	ENSPKIG00000003422	-	67	55.629	Paramormyrops_kingsleyae
ENSKMAG00000005539	rrp1	82	53.083	ENSPSIG00000008152	RRP1B	59	51.714	Pelodiscus_sinensis
ENSKMAG00000005539	rrp1	55	48.072	ENSPMGG00000007512	-	94	47.059	Periophthalmus_magnuspinnatus
ENSKMAG00000005539	rrp1	51	48.127	ENSPEMG00000018421	Rrp1	75	48.571	Peromyscus_maniculatus_bairdii
ENSKMAG00000005539	rrp1	92	42.541	ENSPEMG00000022490	Rrp1b	61	50.820	Peromyscus_maniculatus_bairdii
ENSKMAG00000005539	rrp1	73	48.800	ENSPCIG00000015513	RRP1B	60	48.800	Phascolarctos_cinereus
ENSKMAG00000005539	rrp1	64	44.165	ENSPCIG00000015523	-	72	48.116	Phascolarctos_cinereus
ENSKMAG00000005539	rrp1	92	66.901	ENSPFOG00000007424	-	74	65.962	Poecilia_formosa
ENSKMAG00000005539	rrp1	68	65.733	ENSPLAG00000016684	-	59	67.773	Poecilia_latipinna
ENSKMAG00000005539	rrp1	99	65.443	ENSPMEG00000007042	-	71	67.376	Poecilia_mexicana
ENSKMAG00000005539	rrp1	95	63.793	ENSPREG00000015673	-	71	66.903	Poecilia_reticulata
ENSKMAG00000005539	rrp1	75	46.358	ENSPPYG00000011470	RRP1B	64	46.761	Pongo_abelii
ENSKMAG00000005539	rrp1	51	48.406	ENSPPYG00000011474	RRP1	72	48.116	Pongo_abelii
ENSKMAG00000005539	rrp1	51	45.055	ENSPCOG00000017706	RRP1	75	45.821	Propithecus_coquereli
ENSKMAG00000005539	rrp1	73	51.587	ENSPCOG00000017927	RRP1B	62	51.587	Propithecus_coquereli
ENSKMAG00000005539	rrp1	75	42.759	ENSPVAG00000001436	RRP1B	50	49.378	Pteropus_vampyrus
ENSKMAG00000005539	rrp1	71	46.400	ENSRNOG00000001194	Rrp1b	61	46.400	Rattus_norvegicus
ENSKMAG00000005539	rrp1	73	49.167	ENSRBIG00000041689	RRP1B	58	50.000	Rhinopithecus_bieti
ENSKMAG00000005539	rrp1	51	48.696	ENSRBIG00000032082	RRP1	72	49.275	Rhinopithecus_bieti
ENSKMAG00000005539	rrp1	51	48.696	ENSRROG00000039799	RRP1	72	49.275	Rhinopithecus_roxellana
ENSKMAG00000005539	rrp1	73	49.167	ENSRROG00000031499	RRP1B	60	50.000	Rhinopithecus_roxellana
ENSKMAG00000005539	rrp1	70	45.161	ENSSBOG00000034727	RRP1B	63	45.161	Saimiri_boliviensis_boliviensis
ENSKMAG00000005539	rrp1	51	48.406	ENSSBOG00000034689	RRP1	72	48.116	Saimiri_boliviensis_boliviensis
ENSKMAG00000005539	rrp1	71	49.600	ENSSHAG00000017789	RRP1B	60	49.600	Sarcophilus_harrisii
ENSKMAG00000005539	rrp1	78	56.463	ENSSFOG00015003932	-	68	56.757	Scleropages_formosus
ENSKMAG00000005539	rrp1	94	73.402	ENSSMAG00000016847	-	92	68.010	Scophthalmus_maximus
ENSKMAG00000005539	rrp1	89	66.121	ENSSDUG00000000551	-	66	67.952	Seriola_dumerili
ENSKMAG00000005539	rrp1	86	69.565	ENSSLDG00000002538	-	66	68.193	Seriola_lalandi_dorsalis
ENSKMAG00000005539	rrp1	61	50.000	ENSSARG00000003108	-	59	50.806	Sorex_araneus
ENSKMAG00000005539	rrp1	71	47.354	ENSSPUG00000002834	RRP1B	60	46.518	Sphenodon_punctatus
ENSKMAG00000005539	rrp1	83	67.517	ENSSPAG00000005370	-	65	68.765	Stegastes_partitus
ENSKMAG00000005539	rrp1	54	44.504	ENSSSCG00000037061	RRP1	74	47.701	Sus_scrofa
ENSKMAG00000005539	rrp1	68	54.762	ENSSSCG00000021698	RRP1B	62	54.762	Sus_scrofa
ENSKMAG00000005539	rrp1	70	49.383	ENSTGUG00000005926	RRP1B	61	49.191	Taeniopygia_guttata
ENSKMAG00000005539	rrp1	54	65.123	ENSTRUG00000017592	rrp1	97	63.944	Takifugu_rubripes
ENSKMAG00000005539	rrp1	96	46.402	ENSTNIG00000005053	rrp1	71	60.417	Tetraodon_nigroviridis
ENSKMAG00000005539	rrp1	72	39.894	ENSTBEG00000000422	RRP1B	72	43.934	Tupaia_belangeri
ENSKMAG00000005539	rrp1	72	44.355	ENSTTRG00000000723	RRP1B	61	44.444	Tursiops_truncatus
ENSKMAG00000005539	rrp1	100	35.626	ENSUAMG00000026765	RRP1B	67	48.413	Ursus_americanus
ENSKMAG00000005539	rrp1	67	48.780	ENSUMAG00000025510	RRP1B	79	48.780	Ursus_maritimus
ENSKMAG00000005539	rrp1	94	33.989	ENSVVUG00000024509	RRP1B	59	49.194	Vulpes_vulpes
ENSKMAG00000005539	rrp1	73	45.692	ENSXETG00000013683	rrp1b	67	47.429	Xenopus_tropicalis
ENSKMAG00000005539	rrp1	99	67.062	ENSXMAG00000023123	-	71	67.536	Xiphophorus_maculatus