EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000005605 (Gene tree)
Gene ID
108246311
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
21628 bases
Position
chrLWHD01000206.1:38445-60072
Accession
108246311
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000007505tRNA_anti-codonPF01336.258.6e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000007626-2672-ENSKMAP00000007505610 (aa)-UPI0007F88319
Gene Model
Click here to download ENSKMAG00000005605's gene model file
Pathways
Pathway IDPathway NameSource
kmr03030DNA replicationKEGG
kmr03420Nucleotide excision repairKEGG
kmr03430Mismatch repairKEGG
kmr03440Homologous recombinationKEGG
kmr03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005605's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000005605rpa19959.375ENSKMAG00000000234RPA19959.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000005605rpa19968.161ENSAPOG00000019409RPA18968.161Acanthochromis_polyacanthus
ENSKMAG00000005605rpa19979.967ENSAPOG00000011658rpa19979.836Acanthochromis_polyacanthus
ENSKMAG00000005605rpa19661.889ENSAMEG00000007706RPA19561.383Ailuropoda_melanoleuca
ENSKMAG00000005605rpa19672.867ENSACIG00000007277rpa19972.696Amphilophus_citrinellus
ENSKMAG00000005605rpa19562.226ENSACIG00000012881RPA19961.993Amphilophus_citrinellus
ENSKMAG00000005605rpa19980.952ENSAOCG00000023376rpa19980.624Amphiprion_ocellaris
ENSKMAG00000005605rpa19958.669ENSAOCG00000009003RPA19958.669Amphiprion_ocellaris
ENSKMAG00000005605rpa19980.952ENSAPEG00000008634rpa19980.624Amphiprion_percula
ENSKMAG00000005605rpa19957.640ENSAPEG00000019132RPA19957.640Amphiprion_percula
ENSKMAG00000005605rpa19580.345ENSATEG00000022024rpa110080.034Anabas_testudineus
ENSKMAG00000005605rpa19959.538ENSATEG00000006443RPA19959.385Anabas_testudineus
ENSKMAG00000005605rpa19751.988ENSAPLG00000012442RPA19063.592Anas_platyrhynchos
ENSKMAG00000005605rpa19955.250ENSACAG00000014490RPA19955.200Anolis_carolinensis
ENSKMAG00000005605rpa19662.732ENSANAG00000023456RPA19861.977Aotus_nancymaae
ENSKMAG00000005605rpa19481.818ENSACLG00000006640rpa19981.643Astatotilapia_calliptera
ENSKMAG00000005605rpa19961.068ENSACLG00000005223RPA19960.748Astatotilapia_calliptera
ENSKMAG00000005605rpa19973.399ENSAMXG00000008418rpa19973.235Astyanax_mexicanus
ENSKMAG00000005605rpa19962.013ENSBTAG00000009711RPA19961.688Bos_taurus
ENSKMAG00000005605rpa19959.740ENSCJAG00000001848RPA19960.294Callithrix_jacchus
ENSKMAG00000005605rpa19961.866ENSCAFG00000019249RPA19961.538Canis_familiaris
ENSKMAG00000005605rpa19961.866ENSCAFG00020009847RPA19961.538Canis_lupus_dingo
ENSKMAG00000005605rpa19961.951ENSCHIG00000026308RPA19961.951Capra_hircus
ENSKMAG00000005605rpa19961.111ENSTSYG00000003482-9961.111Carlito_syrichta
ENSKMAG00000005605rpa19961.827ENSCPOG00000000035RPA19961.175Cavia_porcellus
ENSKMAG00000005605rpa19949.435ENSCCAG00000010981RPA19949.919Cebus_capucinus
ENSKMAG00000005605rpa19958.401ENSCLAG00000015045-9957.749Chinchilla_lanigera
ENSKMAG00000005605rpa19961.664ENSCLAG00000005185-9961.175Chinchilla_lanigera
ENSKMAG00000005605rpa19951.535ENSCSAG00000013833RPA19952.033Chlorocebus_sabaeus
ENSKMAG00000005605rpa17169.053ENSCHOG00000009454-9969.053Choloepus_hoffmanni
ENSKMAG00000005605rpa19560.818ENSCHOG00000013540-9960.136Choloepus_hoffmanni
ENSKMAG00000005605rpa19961.201ENSCPBG00000020377RPA19962.500Chrysemys_picta_bellii
ENSKMAG00000005605rpa19941.734ENSCING00000023482-9940.753Ciona_intestinalis
ENSKMAG00000005605rpa19661.655ENSCANG00000030911RPA19861.655Colobus_angolensis_palliatus
ENSKMAG00000005605rpa19960.650ENSCGRG00001008197Rpa19960.650Cricetulus_griseus_chok1gshd
ENSKMAG00000005605rpa18161.811ENSCGRG00000000582Rpa19961.811Cricetulus_griseus_crigri
ENSKMAG00000005605rpa110076.873ENSCSEG00000013066rpa110075.856Cynoglossus_semilaevis
ENSKMAG00000005605rpa19954.213ENSCSEG00000012726RPA19954.872Cynoglossus_semilaevis
ENSKMAG00000005605rpa19655.814ENSCVAG00000013446-9656.502Cyprinodon_variegatus
ENSKMAG00000005605rpa110083.797ENSCVAG00000019431rpa110083.797Cyprinodon_variegatus
ENSKMAG00000005605rpa19971.686ENSDARG00000003938rpa19971.195Danio_rerio
ENSKMAG00000005605rpa19862.438ENSDNOG00000017218RPA19861.779Dasypus_novemcinctus
ENSKMAG00000005605rpa19963.132ENSDORG00000006199Rpa19962.969Dipodomys_ordii
ENSKMAG00000005605rpa19941.396FBgn0010173RpA-709941.883Drosophila_melanogaster
ENSKMAG00000005605rpa18271.277ENSETEG00000017608RPA18271.277Echinops_telfairi
ENSKMAG00000005605rpa19662.925ENSEASG00005009372RPA19861.606Equus_asinus_asinus
ENSKMAG00000005605rpa19962.092ENSECAG00000023886RPA19961.601Equus_caballus
ENSKMAG00000005605rpa16968.019ENSEEUG00000002186-6868.019Erinaceus_europaeus
ENSKMAG00000005605rpa18859.963ENSELUG00000006136RPA19959.124Esox_lucius
ENSKMAG00000005605rpa19976.307ENSELUG00000021071rpa19976.307Esox_lucius
ENSKMAG00000005605rpa19960.784ENSFCAG00000006306RPA19860.131Felis_catus
ENSKMAG00000005605rpa19960.976ENSFALG00000006575RPA19960.163Ficedula_albicollis
ENSKMAG00000005605rpa19962.316ENSFDAG00000007720RPA19961.678Fukomys_damarensis
ENSKMAG00000005605rpa110081.169ENSFHEG00000003580rpa110080.844Fundulus_heteroclitus
ENSKMAG00000005605rpa19972.158ENSGMOG00000010382rpa19971.993Gadus_morhua
ENSKMAG00000005605rpa19960.848ENSGALG00000003072RPA19960.749Gallus_gallus
ENSKMAG00000005605rpa19955.689ENSGAFG00000020953RPA19956.687Gambusia_affinis
ENSKMAG00000005605rpa110080.750ENSGAFG00000012916rpa110080.229Gambusia_affinis
ENSKMAG00000005605rpa110078.502ENSGACG00000010856rpa110078.013Gasterosteus_aculeatus
ENSKMAG00000005605rpa19961.039ENSGAGG00000013611RPA19861.765Gopherus_agassizii
ENSKMAG00000005605rpa19961.349ENSGGOG00000014186RPA19961.349Gorilla_gorilla
ENSKMAG00000005605rpa19983.470ENSHBUG00000017773rpa19983.306Haplochromis_burtoni
ENSKMAG00000005605rpa19556.376ENSHBUG00000009348RPA19855.853Haplochromis_burtoni
ENSKMAG00000005605rpa19961.184ENSHGLG00000008846RPA19962.153Heterocephalus_glaber_female
ENSKMAG00000005605rpa19961.184ENSHGLG00100017755-9962.153Heterocephalus_glaber_male
ENSKMAG00000005605rpa19957.586ENSHGLG00100000799-9957.586Heterocephalus_glaber_male
ENSKMAG00000005605rpa19952.855ENSHGLG00100002005-9952.855Heterocephalus_glaber_male
ENSKMAG00000005605rpa110073.779ENSHCOG00000001401rpa110073.430Hippocampus_comes
ENSKMAG00000005605rpa19944.171ENSHCOG00000000351RPA19843.586Hippocampus_comes
ENSKMAG00000005605rpa19972.204ENSIPUG00000004400rpa19972.204Ictalurus_punctatus
ENSKMAG00000005605rpa19160.702ENSSTOG00000022475RPA19560.351Ictidomys_tridecemlineatus
ENSKMAG00000005605rpa19662.121ENSJJAG00000000876Rpa19862.121Jaculus_jaculus
ENSKMAG00000005605rpa19669.161ENSLBEG00000002281RPA17968.778Labrus_bergylta
ENSKMAG00000005605rpa19979.479ENSLBEG00000021604rpa19979.153Labrus_bergylta
ENSKMAG00000005605rpa17362.472ENSLACG00000007210RPA19062.247Latimeria_chalumnae
ENSKMAG00000005605rpa19970.888ENSLOCG00000006397rpa19969.885Lepisosteus_oculatus
ENSKMAG00000005605rpa19961.712ENSLAFG00000015354RPA19961.003Loxodonta_africana
ENSKMAG00000005605rpa18061.044ENSMFAG00000036138-9861.044Macaca_fascicularis
ENSKMAG00000005605rpa19956.863ENSMMUG00000002442-9956.863Macaca_mulatta
ENSKMAG00000005605rpa19962.193ENSMMUG00000011604-9962.193Macaca_mulatta
ENSKMAG00000005605rpa19960.976ENSMNEG00000031632-9960.976Macaca_nemestrina
ENSKMAG00000005605rpa18762.851ENSMNEG00000029837-9862.851Macaca_nemestrina
ENSKMAG00000005605rpa19659.532ENSMLEG00000038768-9859.732Mandrillus_leucophaeus
ENSKMAG00000005605rpa110081.863ENSMAMG00000017993rpa110081.669Mastacembelus_armatus
ENSKMAG00000005605rpa19369.606ENSMAMG00000020097RPA18368.009Mastacembelus_armatus
ENSKMAG00000005605rpa19961.068ENSMZEG00005024731RPA19960.748Maylandia_zebra
ENSKMAG00000005605rpa19983.142ENSMZEG00005007551rpa19982.979Maylandia_zebra
ENSKMAG00000005605rpa19959.935ENSMGAG00000005315RPA19859.446Meleagris_gallopavo
ENSKMAG00000005605rpa19661.800ENSMAUG00000010474Rpa19861.074Mesocricetus_auratus
ENSKMAG00000005605rpa19962.787ENSMICG00000012867RPA19962.480Microcebus_murinus
ENSKMAG00000005605rpa19960.556ENSMOCG00000013019Rpa19959.738Microtus_ochrogaster
ENSKMAG00000005605rpa110076.885ENSMMOG00000014292rpa110078.680Mola_mola
ENSKMAG00000005605rpa19861.167ENSMMOG00000010868RPA19867.277Mola_mola
ENSKMAG00000005605rpa19961.851ENSMODG00000010549RPA19961.058Monodelphis_domestica
ENSKMAG00000005605rpa110080.820ENSMALG00000011453rpa110080.656Monopterus_albus
ENSKMAG00000005605rpa19969.042ENSMALG00000001208RPA18769.042Monopterus_albus
ENSKMAG00000005605rpa19961.047MGP_CAROLIEiJ_G0016734Rpa19961.011Mus_caroli
ENSKMAG00000005605rpa19960.616ENSMUSG00000000751Rpa19960.065Mus_musculus
ENSKMAG00000005605rpa19961.401MGP_PahariEiJ_G0017871Rpa19960.685Mus_pahari
ENSKMAG00000005605rpa19960.518MGP_SPRETEiJ_G0017577Rpa19959.968Mus_spretus
ENSKMAG00000005605rpa19961.601ENSMPUG00000013119RPA19961.047Mustela_putorius_furo
ENSKMAG00000005605rpa19961.353ENSMLUG00000006113RPA19960.548Myotis_lucifugus
ENSKMAG00000005605rpa19662.752ENSNGAG00000004522Rpa19462.248Nannospalax_galili
ENSKMAG00000005605rpa19858.979ENSNBRG00000009672RPA19758.553Neolamprologus_brichardi
ENSKMAG00000005605rpa19581.488ENSNBRG00000020595rpa19981.315Neolamprologus_brichardi
ENSKMAG00000005605rpa19962.480ENSNLEG00000017149RPA19962.480Nomascus_leucogenys
ENSKMAG00000005605rpa19653.188ENSMEUG00000006714RPA19753.188Notamacropus_eugenii
ENSKMAG00000005605rpa19562.689ENSODEG00000009038RPA19662.689Octodon_degus
ENSKMAG00000005605rpa19981.380ENSONIG00000013135rpa19981.220Oreochromis_niloticus
ENSKMAG00000005605rpa19862.336ENSOANG00000010880RPA19961.678Ornithorhynchus_anatinus
ENSKMAG00000005605rpa19959.627ENSOCUG00000001504RPA19959.346Oryctolagus_cuniculus
ENSKMAG00000005605rpa19981.609ENSORLG00000004856rpa19980.952Oryzias_latipes
ENSKMAG00000005605rpa19957.427ENSORLG00000003368RPA18567.955Oryzias_latipes
ENSKMAG00000005605rpa19955.838ENSORLG00020015284RPA18666.150Oryzias_latipes_hni
ENSKMAG00000005605rpa19981.773ENSORLG00020008980rpa19981.117Oryzias_latipes_hni
ENSKMAG00000005605rpa16767.402ENSORLG00015005867-9367.157Oryzias_latipes_hsok
ENSKMAG00000005605rpa19981.773ENSORLG00015013982rpa19981.117Oryzias_latipes_hsok
ENSKMAG00000005605rpa19958.346ENSORLG00015020383RPA19957.566Oryzias_latipes_hsok
ENSKMAG00000005605rpa19558.448ENSOMEG00000011040RPA19958.031Oryzias_melastigma
ENSKMAG00000005605rpa19978.161ENSOMEG00000004704rpa19977.504Oryzias_melastigma
ENSKMAG00000005605rpa19755.282ENSOGAG00000029379-9676.471Otolemur_garnettii
ENSKMAG00000005605rpa19961.967ENSOGAG00000005581-9961.501Otolemur_garnettii
ENSKMAG00000005605rpa19961.951ENSOARG00000014479RPA19961.951Ovis_aries
ENSKMAG00000005605rpa19962.643ENSPPAG00000039680RPA19962.643Pan_paniscus
ENSKMAG00000005605rpa19960.948ENSPPRG00000011807RPA19860.294Panthera_pardus
ENSKMAG00000005605rpa19960.948ENSPTIG00000007898RPA19860.294Panthera_tigris_altaica
ENSKMAG00000005605rpa19962.969ENSPTRG00000008539RPA19962.969Pan_troglodytes
ENSKMAG00000005605rpa19962.175ENSPANG00000024592RPA19962.175Papio_anubis
ENSKMAG00000005605rpa19474.310ENSPKIG00000008053rpa19474.828Paramormyrops_kingsleyae
ENSKMAG00000005605rpa19762.040ENSPSIG00000015617RPA19762.563Pelodiscus_sinensis
ENSKMAG00000005605rpa19958.643ENSPMGG00000000543RPA19961.199Periophthalmus_magnuspinnatus
ENSKMAG00000005605rpa19975.658ENSPMGG00000011589rpa19975.658Periophthalmus_magnuspinnatus
ENSKMAG00000005605rpa19961.967ENSPEMG00000021061Rpa19960.556Peromyscus_maniculatus_bairdii
ENSKMAG00000005605rpa19960.714ENSPCIG00000019049RPA19961.364Phascolarctos_cinereus
ENSKMAG00000005605rpa110081.240ENSPFOG00000003987rpa110080.719Poecilia_formosa
ENSKMAG00000005605rpa110081.240ENSPLAG00000004984rpa110080.719Poecilia_latipinna
ENSKMAG00000005605rpa19457.536ENSPLAG00000008844-9657.374Poecilia_latipinna
ENSKMAG00000005605rpa19657.325ENSPMEG00000003627-9856.280Poecilia_mexicana
ENSKMAG00000005605rpa110081.403ENSPMEG00000020602rpa110080.882Poecilia_mexicana
ENSKMAG00000005605rpa19069.565ENSPREG00000010119RPA18169.951Poecilia_reticulata
ENSKMAG00000005605rpa19374.737ENSPREG00000010174rpa19574.431Poecilia_reticulata
ENSKMAG00000005605rpa19962.480ENSPCOG00000001799RPA19962.153Propithecus_coquereli
ENSKMAG00000005605rpa19961.789ENSPVAG00000002149RPA19961.301Pteropus_vampyrus
ENSKMAG00000005605rpa19960.911ENSPNYG00000024165RPA19960.592Pundamilia_nyererei
ENSKMAG00000005605rpa19983.470ENSPNYG00000016316rpa19983.306Pundamilia_nyererei
ENSKMAG00000005605rpa19964.735ENSPNAG00000008599rpa19963.355Pygocentrus_nattereri
ENSKMAG00000005605rpa19666.341ENSRNOG00000003123Rpa19960.720Rattus_norvegicus
ENSKMAG00000005605rpa19961.851ENSRBIG00000036587RPA19961.851Rhinopithecus_bieti
ENSKMAG00000005605rpa19956.888ENSRROG00000043278RPA19956.818Rhinopithecus_roxellana
ENSKMAG00000005605rpa19432.264YAR007CRFA17036.961Saccharomyces_cerevisiae
ENSKMAG00000005605rpa19061.879ENSSBOG00000030233RPA19662.500Saimiri_boliviensis_boliviensis
ENSKMAG00000005605rpa19961.827ENSSHAG00000007969RPA19861.175Sarcophilus_harrisii
ENSKMAG00000005605rpa19975.941ENSSFOG00015005362rpa19275.738Scleropages_formosus
ENSKMAG00000005605rpa19956.383ENSSMAG00000019746RPA19952.128Scophthalmus_maximus
ENSKMAG00000005605rpa19070.670ENSSDUG00000016358RPA18170.091Seriola_dumerili
ENSKMAG00000005605rpa110081.803ENSSDUG00000011949rpa110081.669Seriola_dumerili
ENSKMAG00000005605rpa19070.208ENSSLDG00000020784RPA18069.635Seriola_lalandi_dorsalis
ENSKMAG00000005605rpa110082.131ENSSLDG00000011806rpa110081.997Seriola_lalandi_dorsalis
ENSKMAG00000005605rpa19649.580ENSSARG00000007506RPA19849.241Sorex_araneus
ENSKMAG00000005605rpa19761.279ENSSPUG00000007223RPA19860.606Sphenodon_punctatus
ENSKMAG00000005605rpa19962.336ENSSPAG00000011165RPA19962.171Stegastes_partitus
ENSKMAG00000005605rpa110082.488ENSSPAG00000009903rpa110082.160Stegastes_partitus
ENSKMAG00000005605rpa19960.884ENSSSCG00000017822RPA19862.814Sus_scrofa
ENSKMAG00000005605rpa19960.522ENSTGUG00000005775RPA19959.869Taeniopygia_guttata
ENSKMAG00000005605rpa19269.535ENSTRUG00000000405RPA17769.266Takifugu_rubripes
ENSKMAG00000005605rpa110077.049ENSTRUG00000003616rpa110077.049Takifugu_rubripes
ENSKMAG00000005605rpa110078.525ENSTNIG00000016199rpa19977.903Tetraodon_nigroviridis
ENSKMAG00000005605rpa17168.879ENSTBEG00000002709RPA17368.879Tupaia_belangeri
ENSKMAG00000005605rpa19961.463ENSTTRG00000001169RPA19961.463Tursiops_truncatus
ENSKMAG00000005605rpa18669.231ENSUAMG00000015676RPA19569.231Ursus_americanus
ENSKMAG00000005605rpa19961.011ENSUMAG00000009328RPA19960.458Ursus_maritimus
ENSKMAG00000005605rpa19960.229ENSVPAG00000009443RPA19959.481Vicugna_pacos
ENSKMAG00000005605rpa19961.538ENSVVUG00000021715RPA19961.211Vulpes_vulpes
ENSKMAG00000005605rpa19965.260ENSXETG00000013538rpa19965.113Xenopus_tropicalis
ENSKMAG00000005605rpa19559.520ENSXCOG00000009899-9959.450Xiphophorus_couchianus
ENSKMAG00000005605rpa19579.793ENSXCOG00000010068rpa19679.275Xiphophorus_couchianus
ENSKMAG00000005605rpa110079.739ENSXMAG00000004102rpa110079.298Xiphophorus_maculatus
ENSKMAG00000005605rpa19168.650ENSXMAG00000010333RPA17968.650Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us