EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000005605 (Gene tree)
Gene ID
108246311
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Plus strand
Length
21628 bases
Position
chrLWHD01000206.1:38445-60072
Accession
108246311
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000007505tRNA_anti-codonPF01336.258.6e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000007626-2672-ENSKMAP00000007505610 (aa)-UPI0007F88319
Gene Model
Click here to download ENSKMAG00000005605's gene model file
Pathways
Pathway IDPathway NameSource
kmr03030DNA replicationKEGG
kmr03420Nucleotide excision repairKEGG
kmr03430Mismatch repairKEGG
kmr03440Homologous recombinationKEGG
kmr03460Fanconi anemia pathwayKEGG
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000005605rpa19959.375ENSKMAG00000000234RPA19959.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000005605rpa19968.161ENSAPOG00000019409RPA18968.161Acanthochromis_polyacanthus
ENSKMAG00000005605rpa19979.967ENSAPOG00000011658rpa19979.836Acanthochromis_polyacanthus
ENSKMAG00000005605rpa19661.889ENSAMEG00000007706RPA19561.383Ailuropoda_melanoleuca
ENSKMAG00000005605rpa19672.867ENSACIG00000007277rpa19972.696Amphilophus_citrinellus
ENSKMAG00000005605rpa19562.226ENSACIG00000012881RPA19961.993Amphilophus_citrinellus
ENSKMAG00000005605rpa19980.952ENSAOCG00000023376rpa19980.624Amphiprion_ocellaris
ENSKMAG00000005605rpa19958.669ENSAOCG00000009003RPA19958.669Amphiprion_ocellaris
ENSKMAG00000005605rpa19980.952ENSAPEG00000008634rpa19980.624Amphiprion_percula
ENSKMAG00000005605rpa19957.640ENSAPEG00000019132RPA19957.640Amphiprion_percula
ENSKMAG00000005605rpa19580.345ENSATEG00000022024rpa110080.034Anabas_testudineus
ENSKMAG00000005605rpa19959.538ENSATEG00000006443RPA19959.385Anabas_testudineus
ENSKMAG00000005605rpa19751.988ENSAPLG00000012442RPA19063.592Anas_platyrhynchos
ENSKMAG00000005605rpa19955.250ENSACAG00000014490RPA19955.200Anolis_carolinensis
ENSKMAG00000005605rpa19662.732ENSANAG00000023456RPA19861.977Aotus_nancymaae
ENSKMAG00000005605rpa19481.818ENSACLG00000006640rpa19981.643Astatotilapia_calliptera
ENSKMAG00000005605rpa19961.068ENSACLG00000005223RPA19960.748Astatotilapia_calliptera
ENSKMAG00000005605rpa19973.399ENSAMXG00000008418rpa19973.235Astyanax_mexicanus
ENSKMAG00000005605rpa19962.013ENSBTAG00000009711RPA19961.688Bos_taurus
ENSKMAG00000005605rpa19959.740ENSCJAG00000001848RPA19960.294Callithrix_jacchus
ENSKMAG00000005605rpa19961.866ENSCAFG00000019249RPA19961.538Canis_familiaris
ENSKMAG00000005605rpa19961.866ENSCAFG00020009847RPA19961.538Canis_lupus_dingo
ENSKMAG00000005605rpa19961.951ENSCHIG00000026308RPA19961.951Capra_hircus
ENSKMAG00000005605rpa19961.111ENSTSYG00000003482-9961.111Carlito_syrichta
ENSKMAG00000005605rpa19961.827ENSCPOG00000000035RPA19961.175Cavia_porcellus
ENSKMAG00000005605rpa19949.435ENSCCAG00000010981RPA19949.919Cebus_capucinus
ENSKMAG00000005605rpa19958.401ENSCLAG00000015045-9957.749Chinchilla_lanigera
ENSKMAG00000005605rpa19961.664ENSCLAG00000005185-9961.175Chinchilla_lanigera
ENSKMAG00000005605rpa19951.535ENSCSAG00000013833RPA19952.033Chlorocebus_sabaeus
ENSKMAG00000005605rpa17169.053ENSCHOG00000009454-9969.053Choloepus_hoffmanni
ENSKMAG00000005605rpa19560.818ENSCHOG00000013540-9960.136Choloepus_hoffmanni
ENSKMAG00000005605rpa19961.201ENSCPBG00000020377RPA19962.500Chrysemys_picta_bellii
ENSKMAG00000005605rpa19941.734ENSCING00000023482-9940.753Ciona_intestinalis
ENSKMAG00000005605rpa19661.655ENSCANG00000030911RPA19861.655Colobus_angolensis_palliatus
ENSKMAG00000005605rpa19960.650ENSCGRG00001008197Rpa19960.650Cricetulus_griseus_chok1gshd
ENSKMAG00000005605rpa18161.811ENSCGRG00000000582Rpa19961.811Cricetulus_griseus_crigri
ENSKMAG00000005605rpa110076.873ENSCSEG00000013066rpa110075.856Cynoglossus_semilaevis
ENSKMAG00000005605rpa19954.213ENSCSEG00000012726RPA19954.872Cynoglossus_semilaevis
ENSKMAG00000005605rpa19655.814ENSCVAG00000013446-9656.502Cyprinodon_variegatus
ENSKMAG00000005605rpa110083.797ENSCVAG00000019431rpa110083.797Cyprinodon_variegatus
ENSKMAG00000005605rpa19971.686ENSDARG00000003938rpa19971.195Danio_rerio
ENSKMAG00000005605rpa19862.438ENSDNOG00000017218RPA19861.779Dasypus_novemcinctus
ENSKMAG00000005605rpa19963.132ENSDORG00000006199Rpa19962.969Dipodomys_ordii
ENSKMAG00000005605rpa19941.396FBgn0010173RpA-709941.883Drosophila_melanogaster
ENSKMAG00000005605rpa18271.277ENSETEG00000017608RPA18271.277Echinops_telfairi
ENSKMAG00000005605rpa19662.925ENSEASG00005009372RPA19861.606Equus_asinus_asinus
ENSKMAG00000005605rpa19962.092ENSECAG00000023886RPA19961.601Equus_caballus
ENSKMAG00000005605rpa16968.019ENSEEUG00000002186-6868.019Erinaceus_europaeus
ENSKMAG00000005605rpa18859.963ENSELUG00000006136RPA19959.124Esox_lucius
ENSKMAG00000005605rpa19976.307ENSELUG00000021071rpa19976.307Esox_lucius
ENSKMAG00000005605rpa19960.784ENSFCAG00000006306RPA19860.131Felis_catus
ENSKMAG00000005605rpa19960.976ENSFALG00000006575RPA19960.163Ficedula_albicollis
ENSKMAG00000005605rpa19962.316ENSFDAG00000007720RPA19961.678Fukomys_damarensis
ENSKMAG00000005605rpa110081.169ENSFHEG00000003580rpa110080.844Fundulus_heteroclitus
ENSKMAG00000005605rpa19972.158ENSGMOG00000010382rpa19971.993Gadus_morhua
ENSKMAG00000005605rpa19960.848ENSGALG00000003072RPA19960.749Gallus_gallus
ENSKMAG00000005605rpa19955.689ENSGAFG00000020953RPA19956.687Gambusia_affinis
ENSKMAG00000005605rpa110080.750ENSGAFG00000012916rpa110080.229Gambusia_affinis
ENSKMAG00000005605rpa110078.502ENSGACG00000010856rpa110078.013Gasterosteus_aculeatus
ENSKMAG00000005605rpa19961.039ENSGAGG00000013611RPA19861.765Gopherus_agassizii
ENSKMAG00000005605rpa19961.349ENSGGOG00000014186RPA19961.349Gorilla_gorilla
ENSKMAG00000005605rpa19983.470ENSHBUG00000017773rpa19983.306Haplochromis_burtoni
ENSKMAG00000005605rpa19556.376ENSHBUG00000009348RPA19855.853Haplochromis_burtoni
ENSKMAG00000005605rpa19961.184ENSHGLG00000008846RPA19962.153Heterocephalus_glaber_female
ENSKMAG00000005605rpa19961.184ENSHGLG00100017755-9962.153Heterocephalus_glaber_male
ENSKMAG00000005605rpa19957.586ENSHGLG00100000799-9957.586Heterocephalus_glaber_male
ENSKMAG00000005605rpa19952.855ENSHGLG00100002005-9952.855Heterocephalus_glaber_male
ENSKMAG00000005605rpa110073.779ENSHCOG00000001401rpa110073.430Hippocampus_comes
ENSKMAG00000005605rpa19944.171ENSHCOG00000000351RPA19843.586Hippocampus_comes
ENSKMAG00000005605rpa19972.204ENSIPUG00000004400rpa19972.204Ictalurus_punctatus
ENSKMAG00000005605rpa19160.702ENSSTOG00000022475RPA19560.351Ictidomys_tridecemlineatus
ENSKMAG00000005605rpa19662.121ENSJJAG00000000876Rpa19862.121Jaculus_jaculus
ENSKMAG00000005605rpa19669.161ENSLBEG00000002281RPA17968.778Labrus_bergylta
ENSKMAG00000005605rpa19979.479ENSLBEG00000021604rpa19979.153Labrus_bergylta
ENSKMAG00000005605rpa17362.472ENSLACG00000007210RPA19062.247Latimeria_chalumnae
ENSKMAG00000005605rpa19970.888ENSLOCG00000006397rpa19969.885Lepisosteus_oculatus
ENSKMAG00000005605rpa19961.712ENSLAFG00000015354RPA19961.003Loxodonta_africana
ENSKMAG00000005605rpa18061.044ENSMFAG00000036138-9861.044Macaca_fascicularis
ENSKMAG00000005605rpa19956.863ENSMMUG00000002442-9956.863Macaca_mulatta
ENSKMAG00000005605rpa19962.193ENSMMUG00000011604-9962.193Macaca_mulatta
ENSKMAG00000005605rpa19960.976ENSMNEG00000031632-9960.976Macaca_nemestrina
ENSKMAG00000005605rpa18762.851ENSMNEG00000029837-9862.851Macaca_nemestrina
ENSKMAG00000005605rpa19659.532ENSMLEG00000038768-9859.732Mandrillus_leucophaeus
ENSKMAG00000005605rpa110081.863ENSMAMG00000017993rpa110081.669Mastacembelus_armatus
ENSKMAG00000005605rpa19369.606ENSMAMG00000020097RPA18368.009Mastacembelus_armatus
ENSKMAG00000005605rpa19961.068ENSMZEG00005024731RPA19960.748Maylandia_zebra
ENSKMAG00000005605rpa19983.142ENSMZEG00005007551rpa19982.979Maylandia_zebra
ENSKMAG00000005605rpa19959.935ENSMGAG00000005315RPA19859.446Meleagris_gallopavo
ENSKMAG00000005605rpa19661.800ENSMAUG00000010474Rpa19861.074Mesocricetus_auratus
ENSKMAG00000005605rpa19962.787ENSMICG00000012867RPA19962.480Microcebus_murinus
ENSKMAG00000005605rpa19960.556ENSMOCG00000013019Rpa19959.738Microtus_ochrogaster
ENSKMAG00000005605rpa110076.885ENSMMOG00000014292rpa110078.680Mola_mola
ENSKMAG00000005605rpa19861.167ENSMMOG00000010868RPA19867.277Mola_mola
ENSKMAG00000005605rpa19961.851ENSMODG00000010549RPA19961.058Monodelphis_domestica
ENSKMAG00000005605rpa110080.820ENSMALG00000011453rpa110080.656Monopterus_albus
ENSKMAG00000005605rpa19969.042ENSMALG00000001208RPA18769.042Monopterus_albus
ENSKMAG00000005605rpa19961.047MGP_CAROLIEiJ_G0016734Rpa19961.011Mus_caroli
ENSKMAG00000005605rpa19960.616ENSMUSG00000000751Rpa19960.065Mus_musculus
ENSKMAG00000005605rpa19961.401MGP_PahariEiJ_G0017871Rpa19960.685Mus_pahari
ENSKMAG00000005605rpa19960.518MGP_SPRETEiJ_G0017577Rpa19959.968Mus_spretus
ENSKMAG00000005605rpa19961.601ENSMPUG00000013119RPA19961.047Mustela_putorius_furo
ENSKMAG00000005605rpa19961.353ENSMLUG00000006113RPA19960.548Myotis_lucifugus
ENSKMAG00000005605rpa19662.752ENSNGAG00000004522Rpa19462.248Nannospalax_galili
ENSKMAG00000005605rpa19858.979ENSNBRG00000009672RPA19758.553Neolamprologus_brichardi
ENSKMAG00000005605rpa19581.488ENSNBRG00000020595rpa19981.315Neolamprologus_brichardi
ENSKMAG00000005605rpa19962.480ENSNLEG00000017149RPA19962.480Nomascus_leucogenys
ENSKMAG00000005605rpa19653.188ENSMEUG00000006714RPA19753.188Notamacropus_eugenii
ENSKMAG00000005605rpa19562.689ENSODEG00000009038RPA19662.689Octodon_degus
ENSKMAG00000005605rpa19981.380ENSONIG00000013135rpa19981.220Oreochromis_niloticus
ENSKMAG00000005605rpa19862.336ENSOANG00000010880RPA19961.678Ornithorhynchus_anatinus
ENSKMAG00000005605rpa19959.627ENSOCUG00000001504RPA19959.346Oryctolagus_cuniculus
ENSKMAG00000005605rpa19981.609ENSORLG00000004856rpa19980.952Oryzias_latipes
ENSKMAG00000005605rpa19957.427ENSORLG00000003368RPA18567.955Oryzias_latipes
ENSKMAG00000005605rpa19955.838ENSORLG00020015284RPA18666.150Oryzias_latipes_hni
ENSKMAG00000005605rpa19981.773ENSORLG00020008980rpa19981.117Oryzias_latipes_hni
ENSKMAG00000005605rpa16767.402ENSORLG00015005867-9367.157Oryzias_latipes_hsok
ENSKMAG00000005605rpa19981.773ENSORLG00015013982rpa19981.117Oryzias_latipes_hsok
ENSKMAG00000005605rpa19958.346ENSORLG00015020383RPA19957.566Oryzias_latipes_hsok
ENSKMAG00000005605rpa19558.448ENSOMEG00000011040RPA19958.031Oryzias_melastigma
ENSKMAG00000005605rpa19978.161ENSOMEG00000004704rpa19977.504Oryzias_melastigma
ENSKMAG00000005605rpa19755.282ENSOGAG00000029379-9676.471Otolemur_garnettii
ENSKMAG00000005605rpa19961.967ENSOGAG00000005581-9961.501Otolemur_garnettii
ENSKMAG00000005605rpa19961.951ENSOARG00000014479RPA19961.951Ovis_aries
ENSKMAG00000005605rpa19962.643ENSPPAG00000039680RPA19962.643Pan_paniscus
ENSKMAG00000005605rpa19960.948ENSPPRG00000011807RPA19860.294Panthera_pardus
ENSKMAG00000005605rpa19960.948ENSPTIG00000007898RPA19860.294Panthera_tigris_altaica
ENSKMAG00000005605rpa19962.969ENSPTRG00000008539RPA19962.969Pan_troglodytes
ENSKMAG00000005605rpa19962.175ENSPANG00000024592RPA19962.175Papio_anubis
ENSKMAG00000005605rpa19474.310ENSPKIG00000008053rpa19474.828Paramormyrops_kingsleyae
ENSKMAG00000005605rpa19762.040ENSPSIG00000015617RPA19762.563Pelodiscus_sinensis
ENSKMAG00000005605rpa19958.643ENSPMGG00000000543RPA19961.199Periophthalmus_magnuspinnatus
ENSKMAG00000005605rpa19975.658ENSPMGG00000011589rpa19975.658Periophthalmus_magnuspinnatus
ENSKMAG00000005605rpa19961.967ENSPEMG00000021061Rpa19960.556Peromyscus_maniculatus_bairdii
ENSKMAG00000005605rpa19960.714ENSPCIG00000019049RPA19961.364Phascolarctos_cinereus
ENSKMAG00000005605rpa110081.240ENSPFOG00000003987rpa110080.719Poecilia_formosa
ENSKMAG00000005605rpa110081.240ENSPLAG00000004984rpa110080.719Poecilia_latipinna
ENSKMAG00000005605rpa19457.536ENSPLAG00000008844-9657.374Poecilia_latipinna
ENSKMAG00000005605rpa19657.325ENSPMEG00000003627-9856.280Poecilia_mexicana
ENSKMAG00000005605rpa110081.403ENSPMEG00000020602rpa110080.882Poecilia_mexicana
ENSKMAG00000005605rpa19069.565ENSPREG00000010119RPA18169.951Poecilia_reticulata
ENSKMAG00000005605rpa19374.737ENSPREG00000010174rpa19574.431Poecilia_reticulata
ENSKMAG00000005605rpa19962.480ENSPCOG00000001799RPA19962.153Propithecus_coquereli
ENSKMAG00000005605rpa19961.789ENSPVAG00000002149RPA19961.301Pteropus_vampyrus
ENSKMAG00000005605rpa19960.911ENSPNYG00000024165RPA19960.592Pundamilia_nyererei
ENSKMAG00000005605rpa19983.470ENSPNYG00000016316rpa19983.306Pundamilia_nyererei
ENSKMAG00000005605rpa19964.735ENSPNAG00000008599rpa19963.355Pygocentrus_nattereri
ENSKMAG00000005605rpa19666.341ENSRNOG00000003123Rpa19960.720Rattus_norvegicus
ENSKMAG00000005605rpa19961.851ENSRBIG00000036587RPA19961.851Rhinopithecus_bieti
ENSKMAG00000005605rpa19956.888ENSRROG00000043278RPA19956.818Rhinopithecus_roxellana
ENSKMAG00000005605rpa19432.264YAR007CRFA17036.961Saccharomyces_cerevisiae
ENSKMAG00000005605rpa19061.879ENSSBOG00000030233RPA19662.500Saimiri_boliviensis_boliviensis
ENSKMAG00000005605rpa19961.827ENSSHAG00000007969RPA19861.175Sarcophilus_harrisii
ENSKMAG00000005605rpa19975.941ENSSFOG00015005362rpa19275.738Scleropages_formosus
ENSKMAG00000005605rpa19956.383ENSSMAG00000019746RPA19952.128Scophthalmus_maximus
ENSKMAG00000005605rpa19070.670ENSSDUG00000016358RPA18170.091Seriola_dumerili
ENSKMAG00000005605rpa110081.803ENSSDUG00000011949rpa110081.669Seriola_dumerili
ENSKMAG00000005605rpa19070.208ENSSLDG00000020784RPA18069.635Seriola_lalandi_dorsalis
ENSKMAG00000005605rpa110082.131ENSSLDG00000011806rpa110081.997Seriola_lalandi_dorsalis
ENSKMAG00000005605rpa19649.580ENSSARG00000007506RPA19849.241Sorex_araneus
ENSKMAG00000005605rpa19761.279ENSSPUG00000007223RPA19860.606Sphenodon_punctatus
ENSKMAG00000005605rpa19962.336ENSSPAG00000011165RPA19962.171Stegastes_partitus
ENSKMAG00000005605rpa110082.488ENSSPAG00000009903rpa110082.160Stegastes_partitus
ENSKMAG00000005605rpa19960.884ENSSSCG00000017822RPA19862.814Sus_scrofa
ENSKMAG00000005605rpa19960.522ENSTGUG00000005775RPA19959.869Taeniopygia_guttata
ENSKMAG00000005605rpa19269.535ENSTRUG00000000405RPA17769.266Takifugu_rubripes
ENSKMAG00000005605rpa110077.049ENSTRUG00000003616rpa110077.049Takifugu_rubripes
ENSKMAG00000005605rpa110078.525ENSTNIG00000016199rpa19977.903Tetraodon_nigroviridis
ENSKMAG00000005605rpa17168.879ENSTBEG00000002709RPA17368.879Tupaia_belangeri
ENSKMAG00000005605rpa19961.463ENSTTRG00000001169RPA19961.463Tursiops_truncatus
ENSKMAG00000005605rpa18669.231ENSUAMG00000015676RPA19569.231Ursus_americanus
ENSKMAG00000005605rpa19961.011ENSUMAG00000009328RPA19960.458Ursus_maritimus
ENSKMAG00000005605rpa19960.229ENSVPAG00000009443RPA19959.481Vicugna_pacos
ENSKMAG00000005605rpa19961.538ENSVVUG00000021715RPA19961.211Vulpes_vulpes
ENSKMAG00000005605rpa19965.260ENSXETG00000013538rpa19965.113Xenopus_tropicalis
ENSKMAG00000005605rpa19559.520ENSXCOG00000009899-9959.450Xiphophorus_couchianus
ENSKMAG00000005605rpa19579.793ENSXCOG00000010068rpa19679.275Xiphophorus_couchianus
ENSKMAG00000005605rpa110079.739ENSXMAG00000004102rpa110079.298Xiphophorus_maculatus
ENSKMAG00000005605rpa19168.650ENSXMAG00000010333RPA17968.650Xiphophorus_maculatus

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