EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000005608 (Gene tree)
Gene ID: 108249754
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 24901 bases
Position: chrLWHD01000490.1:58955-83855
Accession: 108249754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000007434	RRM_1	PF00076.22	1.3e-19	1	1
ENSKMAP00000007434	U1snRNP70_N	PF12220.8	3.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000007554	-	2333	XM_017439331	ENSKMAP00000007434	462 (aa)	XP_017294820	UPI0007F8F9EE

Gene Model

Click here to download ENSKMAG00000005608's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005608	snrnp70	56	46.332	WBGene00004390	rnp-7	56	51.064	Caenorhabditis_elegans
ENSKMAG00000005608	snrnp70	99	77.874	ENSHCOG00000010270	snrnp70	100	77.991	Hippocampus_comes
ENSKMAG00000005608	snrnp70	55	83.203	ENSLAFG00000028536	SNRNP70	96	92.342	Loxodonta_africana
ENSKMAG00000005608	snrnp70	100	84.335	ENSXMAG00000012789	snrnp70	100	83.047	Xiphophorus_maculatus