EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSKMAG00000005685 (Gene tree)
Gene ID
108233100
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Minus strand
Length
14379 bases
Position
chrLWHD01000019.1:2667306-2681684
Accession
108233100
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000007677CSDPF00313.227.9e-8215
ENSKMAP00000007677CSDPF00313.227.9e-8225
ENSKMAP00000007677CSDPF00313.227.9e-8235
ENSKMAP00000007677CSDPF00313.227.9e-8245
ENSKMAP00000007677CSDPF00313.227.9e-8255
ENSKMAP00000007697CSDPF00313.221.5e-8115
ENSKMAP00000007697CSDPF00313.221.5e-8125
ENSKMAP00000007697CSDPF00313.221.5e-8135
ENSKMAP00000007697CSDPF00313.221.5e-8145
ENSKMAP00000007697CSDPF00313.221.5e-8155
ENSKMAP00000007641CSDPF00313.223.2e-8115
ENSKMAP00000007641CSDPF00313.223.2e-8125
ENSKMAP00000007641CSDPF00313.223.2e-8135
ENSKMAP00000007641CSDPF00313.223.2e-8145
ENSKMAP00000007641CSDPF00313.223.2e-8155
ENSKMAP00000007744CSDPF00313.221.2e-7815
ENSKMAP00000007744CSDPF00313.221.2e-7825
ENSKMAP00000007744CSDPF00313.221.2e-7835
ENSKMAP00000007744CSDPF00313.221.2e-7845
ENSKMAP00000007744CSDPF00313.221.2e-7855
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000007798-4807XM_017411307ENSKMAP00000007677857 (aa)XP_017266796-
ENSKMAT00000007867-2220-ENSKMAP00000007744739 (aa)--
ENSKMAT00000007819-4630XM_017411316ENSKMAP00000007697805 (aa)XP_017266805-
ENSKMAT00000007762-4819XM_017411305ENSKMAP00000007641861 (aa)XP_017266794-
Gene Model
Click here to download ENSKMAG00000005685's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005685's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000005685csde110076.267ENSG00000009307CSDE110081.915Homo_sapiens
ENSKMAG00000005685csde110089.818ENSAPOG00000015538csde110089.818Acanthochromis_polyacanthus
ENSKMAG00000005685csde110073.234ENSAMEG00000017129CSDE19971.986Ailuropoda_melanoleuca
ENSKMAG00000005685csde18891.200ENSACIG00000015175csde110092.183Amphilophus_citrinellus
ENSKMAG00000005685csde110089.212ENSAOCG00000011510csde110088.279Amphiprion_ocellaris
ENSKMAG00000005685csde110091.811ENSAPEG00000007194csde110089.647Amphiprion_percula
ENSKMAG00000005685csde110086.973ENSATEG00000003864csde110087.406Anabas_testudineus
ENSKMAG00000005685csde110075.465ENSAPLG00000008797CSDE110075.841Anas_platyrhynchos
ENSKMAG00000005685csde110077.874ENSACAG00000003120CSDE110078.261Anolis_carolinensis
ENSKMAG00000005685csde110076.020ENSANAG00000024665CSDE19974.941Aotus_nancymaae
ENSKMAG00000005685csde19258.846ENSANAG00000028396-9162.245Aotus_nancymaae
ENSKMAG00000005685csde110091.315ENSACLG00000013296csde110091.771Astatotilapia_calliptera
ENSKMAG00000005685csde110081.931ENSAMXG00000007436csde110082.338Astyanax_mexicanus
ENSKMAG00000005685csde110076.143ENSBTAG00000000678CSDE110074.097Bos_taurus
ENSKMAG00000005685csde110076.143ENSCJAG00000012565CSDE19975.059Callithrix_jacchus
ENSKMAG00000005685csde19874.210ENSCAFG00000009618CSDE19873.269Canis_familiaris
ENSKMAG00000005685csde110074.102ENSCAFG00020000481CSDE110074.471Canis_lupus_dingo
ENSKMAG00000005685csde110076.020ENSCHIG00000017250CSDE110073.973Capra_hircus
ENSKMAG00000005685csde110076.267ENSTSYG00000003747CSDE110076.646Carlito_syrichta
ENSKMAG00000005685csde110075.460ENSCAPG00000015128CSDE110075.460Cavia_aperea
ENSKMAG00000005685csde110072.367ENSCPOG00000040388CSDE110072.727Cavia_porcellus
ENSKMAG00000005685csde110076.143ENSCCAG00000036794CSDE110076.522Cebus_capucinus
ENSKMAG00000005685csde19854.405ENSCCAG00000030878-9154.705Cebus_capucinus
ENSKMAG00000005685csde19555.581ENSCCAG00000033677-9956.103Cebus_capucinus
ENSKMAG00000005685csde110076.267ENSCATG00000036962CSDE19975.177Cercocebus_atys
ENSKMAG00000005685csde110076.391ENSCLAG00000006618CSDE110076.770Chinchilla_lanigera
ENSKMAG00000005685csde110076.267ENSCSAG00000001658CSDE19975.177Chlorocebus_sabaeus
ENSKMAG00000005685csde110081.553ENSCHOG00000000918CSDE19081.707Choloepus_hoffmanni
ENSKMAG00000005685csde110077.998ENSCPBG00000016547CSDE110078.385Chrysemys_picta_bellii
ENSKMAG00000005685csde19743.727ENSCING00000014465-9643.941Ciona_intestinalis
ENSKMAG00000005685csde19742.073ENSCSAVG00000008100-9055.882Ciona_savignyi
ENSKMAG00000005685csde19079.401ENSCANG00000031069-9379.401Colobus_angolensis_palliatus
ENSKMAG00000005685csde110076.267ENSCANG00000035096CSDE19975.059Colobus_angolensis_palliatus
ENSKMAG00000005685csde110060.395ENSCGRG00001014011-10060.395Cricetulus_griseus_chok1gshd
ENSKMAG00000005685csde110075.773ENSCGRG00001016833-10076.025Cricetulus_griseus_chok1gshd
ENSKMAG00000005685csde19772.489ENSCGRG00000002225-10072.907Cricetulus_griseus_crigri
ENSKMAG00000005685csde110063.566ENSCGRG00000005831-10063.566Cricetulus_griseus_crigri
ENSKMAG00000005685csde110087.273ENSCSEG00000002620csde110085.910Cynoglossus_semilaevis
ENSKMAG00000005685csde110092.556ENSCVAG00000001344csde110092.556Cyprinodon_variegatus
ENSKMAG00000005685csde110084.758ENSDARG00000074758csde110085.181Danio_rerio
ENSKMAG00000005685csde110074.257ENSDNOG00000010287-9474.381Dasypus_novemcinctus
ENSKMAG00000005685csde15656.250ENSDNOG00000034464-9963.810Dasypus_novemcinctus
ENSKMAG00000005685csde110075.896ENSDORG00000011609Csde110076.273Dipodomys_ordii
ENSKMAG00000005685csde19948.577FBgn0263352Unr8246.979Drosophila_melanogaster
ENSKMAG00000005685csde19957.196ENSETEG00000013678-9957.481Echinops_telfairi
ENSKMAG00000005685csde17653.583ENSETEG00000007109-9953.934Echinops_telfairi
ENSKMAG00000005685csde19165.224ENSETEG00000006280-9965.616Echinops_telfairi
ENSKMAG00000005685csde19382.114ENSETEG00000002491-7882.114Echinops_telfairi
ENSKMAG00000005685csde19954.890ENSEBUG00000008647csde19953.452Eptatretus_burgeri
ENSKMAG00000005685csde110076.638ENSEASG00005006284CSDE110077.019Equus_asinus_asinus
ENSKMAG00000005685csde110076.638ENSECAG00000020885CSDE110077.019Equus_caballus
ENSKMAG00000005685csde19374.286ENSEEUG00000006286CSDE17371.649Erinaceus_europaeus
ENSKMAG00000005685csde110084.838ENSELUG00000015507csde110082.258Esox_lucius
ENSKMAG00000005685csde110076.514ENSFCAG00000029266CSDE110074.471Felis_catus
ENSKMAG00000005685csde110077.503ENSFALG00000003407CSDE110077.888Ficedula_albicollis
ENSKMAG00000005685csde110075.773ENSFDAG00000007882CSDE110076.149Fukomys_damarensis
ENSKMAG00000005685csde110092.079ENSFHEG00000010799csde110092.519Fundulus_heteroclitus
ENSKMAG00000005685csde19987.345ENSGMOG00000012731csde110087.781Gadus_morhua
ENSKMAG00000005685csde19877.834ENSGALG00000002139CSDE19878.228Gallus_gallus
ENSKMAG00000005685csde19587.572ENSGAFG00000005241csde19588.081Gambusia_affinis
ENSKMAG00000005685csde19989.317ENSGACG00000004544csde110089.763Gasterosteus_aculeatus
ENSKMAG00000005685csde110077.998ENSGAGG00000017685CSDE110078.385Gopherus_agassizii
ENSKMAG00000005685csde110076.267ENSGGOG00000002164CSDE110074.222Gorilla_gorilla
ENSKMAG00000005685csde110091.811ENSHBUG00000020315csde110091.502Haplochromis_burtoni
ENSKMAG00000005685csde110064.064ENSHGLG00000019549-10064.259Heterocephalus_glaber_female
ENSKMAG00000005685csde110066.543ENSHGLG00000003829-10066.874Heterocephalus_glaber_female
ENSKMAG00000005685csde19765.284ENSHGLG00000010039-10065.859Heterocephalus_glaber_female
ENSKMAG00000005685csde19967.111ENSHGLG00000008555-9967.511Heterocephalus_glaber_female
ENSKMAG00000005685csde19961.586ENSHGLG00000000650-9961.940Heterocephalus_glaber_female
ENSKMAG00000005685csde110069.592ENSHGLG00000009620-10070.062Heterocephalus_glaber_female
ENSKMAG00000005685csde19964.875ENSHGLG00000007471-9865.201Heterocephalus_glaber_female
ENSKMAG00000005685csde19765.066ENSHGLG00100006910-10065.639Heterocephalus_glaber_male
ENSKMAG00000005685csde110076.020ENSHGLG00100019438-10076.398Heterocephalus_glaber_male
ENSKMAG00000005685csde19760.089ENSHGLG00100004833-10060.352Heterocephalus_glaber_male
ENSKMAG00000005685csde19964.691ENSHGLG00100002245-9965.012Heterocephalus_glaber_male
ENSKMAG00000005685csde110062.330ENSHGLG00100012072-10062.640Heterocephalus_glaber_male
ENSKMAG00000005685csde19462.037ENSHGLG00100004195-10062.500Heterocephalus_glaber_male
ENSKMAG00000005685csde110060.670ENSHGLG00100001846-10060.848Heterocephalus_glaber_male
ENSKMAG00000005685csde19964.125ENSHGLG00100007287-9864.447Heterocephalus_glaber_male
ENSKMAG00000005685csde110089.082ENSHCOG00000004158csde110085.661Hippocampus_comes
ENSKMAG00000005685csde110081.064ENSIPUG00000000355csde110081.468Ictalurus_punctatus
ENSKMAG00000005685csde19255.137ENSSTOG00000032722-9859.191Ictidomys_tridecemlineatus
ENSKMAG00000005685csde110062.531ENSSTOG00000030994-10062.840Ictidomys_tridecemlineatus
ENSKMAG00000005685csde110076.020ENSJJAG00000019571Csde110076.273Jaculus_jaculus
ENSKMAG00000005685csde110089.576ENSLBEG00000014770csde110088.030Labrus_bergylta
ENSKMAG00000005685csde110075.092ENSLACG00000018452CSDE19973.740Latimeria_chalumnae
ENSKMAG00000005685csde110085.112ENSLOCG00000010413csde110082.964Lepisosteus_oculatus
ENSKMAG00000005685csde110073.606ENSLAFG00000007150CSDE19673.730Loxodonta_africana
ENSKMAG00000005685csde110076.267ENSMFAG00000003674CSDE110074.222Macaca_fascicularis
ENSKMAG00000005685csde110076.267ENSMMUG00000001974CSDE110074.222Macaca_mulatta
ENSKMAG00000005685csde110076.267ENSMNEG00000045247CSDE19975.177Macaca_nemestrina
ENSKMAG00000005685csde110076.020ENSMLEG00000038673CSDE19974.941Mandrillus_leucophaeus
ENSKMAG00000005685csde110089.455ENSMAMG00000008821csde110088.155Mastacembelus_armatus
ENSKMAG00000005685csde110091.811ENSMZEG00005021675csde110091.462Maylandia_zebra
ENSKMAG00000005685csde19877.960ENSMGAG00000016381CSDE19878.354Meleagris_gallopavo
ENSKMAG00000005685csde110075.773ENSMAUG00000014031Csde110076.025Mesocricetus_auratus
ENSKMAG00000005685csde110076.143ENSMICG00000002050CSDE19875.149Microcebus_murinus
ENSKMAG00000005685csde110075.773ENSMOCG00000018960Csde110076.025Microtus_ochrogaster
ENSKMAG00000005685csde110087.965ENSMMOG00000015075csde110088.404Mola_mola
ENSKMAG00000005685csde110077.256ENSMODG00000004685CSDE110077.640Monodelphis_domestica
ENSKMAG00000005685csde110087.841ENSMALG00000007132csde110088.279Monopterus_albus
ENSKMAG00000005685csde110075.896MGP_CAROLIEiJ_G0025444Csde19292.157Mus_caroli
ENSKMAG00000005685csde110076.020ENSMUSG00000068823Csde19192.157Mus_musculus
ENSKMAG00000005685csde110075.896MGP_PahariEiJ_G0026888Csde19292.157Mus_pahari
ENSKMAG00000005685csde110075.896MGP_SPRETEiJ_G0026394Csde19292.157Mus_spretus
ENSKMAG00000005685csde19876.671ENSMPUG00000005753CSDE19977.060Mustela_putorius_furo
ENSKMAG00000005685csde110073.606ENSMLUG00000005681CSDE19872.825Myotis_lucifugus
ENSKMAG00000005685csde110075.649ENSNGAG00000021929Csde110075.901Nannospalax_galili
ENSKMAG00000005685csde19752.620ENSNGAG00000012599-10052.863Nannospalax_galili
ENSKMAG00000005685csde110087.841ENSNBRG00000020808csde110088.279Neolamprologus_brichardi
ENSKMAG00000005685csde110076.267ENSNLEG00000004842CSDE19975.177Nomascus_leucogenys
ENSKMAG00000005685csde19883.495ENSMEUG00000002677CSDE19583.495Notamacropus_eugenii
ENSKMAG00000005685csde19881.553ENSOPRG00000005002CSDE17681.553Ochotona_princeps
ENSKMAG00000005685csde110075.649ENSODEG00000007383-10076.025Octodon_degus
ENSKMAG00000005685csde19751.193ENSODEG00000005979-9852.796Octodon_degus
ENSKMAG00000005685csde110089.091ENSONIG00000009309csde110089.525Oreochromis_niloticus
ENSKMAG00000005685csde110081.356ENSOANG00000003346-8381.356Ornithorhynchus_anatinus
ENSKMAG00000005685csde110075.896ENSOCUG00000016438CSDE19975.059Oryctolagus_cuniculus
ENSKMAG00000005685csde110088.364ENSORLG00000000707csde110088.794Oryzias_latipes
ENSKMAG00000005685csde110090.323ENSORLG00020005148csde110089.825Oryzias_latipes_hni
ENSKMAG00000005685csde110090.323ENSORLG00015019415csde110088.672Oryzias_latipes_hsok
ENSKMAG00000005685csde110089.330ENSOMEG00000015656csde110088.307Oryzias_melastigma
ENSKMAG00000005685csde110073.978ENSOGAG00000012127CSDE19873.063Otolemur_garnettii
ENSKMAG00000005685csde110073.606ENSOARG00000020034CSDE19872.706Ovis_aries
ENSKMAG00000005685csde110076.267ENSPPAG00000025861CSDE110074.222Pan_paniscus
ENSKMAG00000005685csde110076.514ENSPPRG00000006747CSDE19875.505Panthera_pardus
ENSKMAG00000005685csde110076.514ENSPTIG00000015468CSDE110076.894Panthera_tigris_altaica
ENSKMAG00000005685csde110076.267ENSPTRG00000033721CSDE110076.646Pan_troglodytes
ENSKMAG00000005685csde110076.267ENSPANG00000018873CSDE110074.222Papio_anubis
ENSKMAG00000005685csde110081.514ENSPKIG00000009459csde110081.920Paramormyrops_kingsleyae
ENSKMAG00000005685csde19681.057ENSPSIG00000003823CSDE19681.057Pelodiscus_sinensis
ENSKMAG00000005685csde110084.615ENSPMGG00000000772csde110084.932Periophthalmus_magnuspinnatus
ENSKMAG00000005685csde110076.020ENSPEMG00000020357-10076.273Peromyscus_maniculatus_bairdii
ENSKMAG00000005685csde110077.379ENSPCIG00000022587CSDE110077.764Phascolarctos_cinereus
ENSKMAG00000005685csde19992.427ENSPFOG00000012664csde110092.427Poecilia_formosa
ENSKMAG00000005685csde19589.223ENSPLAG00000017680csde19389.223Poecilia_latipinna
ENSKMAG00000005685csde19589.223ENSPMEG00000005094csde19589.223Poecilia_mexicana
ENSKMAG00000005685csde110092.680ENSPREG00000011631csde110089.568Poecilia_reticulata
ENSKMAG00000005685csde110076.143ENSPPYG00000000996CSDE110076.522Pongo_abelii
ENSKMAG00000005685csde110082.524ENSPCAG00000014368CSDE19082.524Procavia_capensis
ENSKMAG00000005685csde110076.391ENSPCOG00000017893CSDE110076.770Propithecus_coquereli
ENSKMAG00000005685csde19070.632ENSPCOG00000008223-9270.632Propithecus_coquereli
ENSKMAG00000005685csde110068.897ENSPVAG00000008225CSDE19968.252Pteropus_vampyrus
ENSKMAG00000005685csde110091.811ENSPNYG00000013745csde110091.502Pundamilia_nyererei
ENSKMAG00000005685csde110086.015ENSPNAG00000001958csde110082.711Pygocentrus_nattereri
ENSKMAG00000005685csde110075.773ENSRNOG00000061058Csde110076.025Rattus_norvegicus
ENSKMAG00000005685csde110071.481ENSRBIG00000038966-9970.720Rhinopithecus_bieti
ENSKMAG00000005685csde110073.300ENSRBIG00000038088-9973.518Rhinopithecus_bieti
ENSKMAG00000005685csde110076.267ENSRROG00000043101CSDE19975.177Rhinopithecus_roxellana
ENSKMAG00000005685csde110076.143ENSSBOG00000035592CSDE19975.059Saimiri_boliviensis_boliviensis
ENSKMAG00000005685csde110074.969ENSSHAG00000009831CSDE110075.342Sarcophilus_harrisii
ENSKMAG00000005685csde110082.652ENSSFOG00015007498csde110082.652Scleropages_formosus
ENSKMAG00000005685csde110088.606ENSSMAG00000007203csde110088.551Scophthalmus_maximus
ENSKMAG00000005685csde110088.875ENSSDUG00000015380csde110088.155Seriola_dumerili
ENSKMAG00000005685csde110090.943ENSSLDG00000008819csde110091.397Seriola_lalandi_dorsalis
ENSKMAG00000005685csde110073.482ENSSARG00000000738CSDE19972.209Sorex_araneus
ENSKMAG00000005685csde110077.998ENSSPUG00000008714CSDE110078.385Sphenodon_punctatus
ENSKMAG00000005685csde110091.687ENSSPAG00000000716csde110088.155Stegastes_partitus
ENSKMAG00000005685csde110076.638ENSSSCG00000006752CSDE110074.595Sus_scrofa
ENSKMAG00000005685csde110076.819ENSTGUG00000000972CSDE110077.200Taeniopygia_guttata
ENSKMAG00000005685csde110081.017ENSTRUG00000007996csde110081.421Takifugu_rubripes
ENSKMAG00000005685csde19391.188ENSTNIG00000010878csde110091.188Tetraodon_nigroviridis
ENSKMAG00000005685csde19379.755ENSTBEG00000011880-6477.500Tupaia_belangeri
ENSKMAG00000005685csde110073.606ENSTTRG00000015583CSDE19972.630Tursiops_truncatus
ENSKMAG00000005685csde19069.289ENSUAMG00000024289-9969.711Ursus_americanus
ENSKMAG00000005685csde19282.508ENSUAMG00000021779-9782.508Ursus_americanus
ENSKMAG00000005685csde110067.906ENSUMAG00000009720-9967.485Ursus_maritimus
ENSKMAG00000005685csde19471.860ENSUMAG00000011714-9972.535Ursus_maritimus
ENSKMAG00000005685csde110074.648ENSVPAG00000000749CSDE18374.648Vicugna_pacos
ENSKMAG00000005685csde19175.396ENSVVUG00000009890CSDE19475.832Vulpes_vulpes
ENSKMAG00000005685csde110076.724ENSXETG00000021448csde110077.104Xenopus_tropicalis
ENSKMAG00000005685csde19587.805ENSXCOG00000000035csde18988.525Xiphophorus_couchianus
ENSKMAG00000005685csde110092.680ENSXMAG00000009080csde110091.735Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us