EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000005853 (Gene tree)
Gene ID: 108234399
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8314 bases
Position: chrLWHD01000026.1:986835-995148
Accession: 108234399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000007795	R3H	PF01424.22	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000007918	-	4885	XM_017413578	ENSKMAP00000007795	256 (aa)	XP_017269067	UPI0007F8E649

Gene Model

Click here to download ENSKMAG00000005853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005853	r3hdm4	91	56.485	ENSG00000198858	R3HDM4	97	55.602	Homo_sapiens
ENSKMAG00000005853	r3hdm4	91	56.067	ENSAMEG00000003001	R3HDM4	97	56.067	Ailuropoda_melanoleuca
ENSKMAG00000005853	r3hdm4	100	86.719	ENSACIG00000004672	r3hdm4	100	86.719	Amphilophus_citrinellus
ENSKMAG00000005853	r3hdm4	98	82.540	ENSATEG00000015913	r3hdm4	99	82.540	Anabas_testudineus
ENSKMAG00000005853	r3hdm4	91	57.322	ENSANAG00000029748	R3HDM4	98	57.322	Aotus_nancymaae
ENSKMAG00000005853	r3hdm4	95	55.212	ENSBTAG00000046406	R3HDM4	91	56.400	Bos_taurus
ENSKMAG00000005853	r3hdm4	93	56.627	ENSCJAG00000020114	R3HDM4	92	56.627	Callithrix_jacchus
ENSKMAG00000005853	r3hdm4	91	56.904	ENSCAFG00000019665	R3HDM4	87	56.904	Canis_familiaris
ENSKMAG00000005853	r3hdm4	91	57.322	ENSCAFG00020016880	R3HDM4	87	57.322	Canis_lupus_dingo
ENSKMAG00000005853	r3hdm4	93	56.800	ENSCHIG00000020110	R3HDM4	91	57.741	Capra_hircus
ENSKMAG00000005853	r3hdm4	91	56.911	ENSCCAG00000019955	R3HDM4	89	56.911	Cebus_capucinus
ENSKMAG00000005853	r3hdm4	91	56.017	ENSCATG00000037269	R3HDM4	89	56.250	Cercocebus_atys
ENSKMAG00000005853	r3hdm4	91	56.303	ENSCLAG00000007094	R3HDM4	97	56.303	Chinchilla_lanigera
ENSKMAG00000005853	r3hdm4	91	56.485	ENSCSAG00000012574	R3HDM4	88	56.485	Chlorocebus_sabaeus
ENSKMAG00000005853	r3hdm4	100	60.902	ENSCPBG00000009805	R3HDM4	100	60.902	Chrysemys_picta_bellii
ENSKMAG00000005853	r3hdm4	91	56.485	ENSCANG00000040439	R3HDM4	83	56.485	Colobus_angolensis_palliatus
ENSKMAG00000005853	r3hdm4	99	52.075	ENSCGRG00001021650	R3hdm4	99	52.075	Cricetulus_griseus_chok1gshd
ENSKMAG00000005853	r3hdm4	99	52.075	ENSCGRG00000013169	R3hdm4	99	52.075	Cricetulus_griseus_crigri
ENSKMAG00000005853	r3hdm4	100	75.781	ENSCSEG00000018211	r3hdm4	100	75.781	Cynoglossus_semilaevis
ENSKMAG00000005853	r3hdm4	100	89.453	ENSCVAG00000017127	r3hdm4	100	89.453	Cyprinodon_variegatus
ENSKMAG00000005853	r3hdm4	90	55.417	ENSDORG00000006605	R3hdm4	96	55.417	Dipodomys_ordii
ENSKMAG00000005853	r3hdm4	91	56.485	ENSEASG00005021556	R3HDM4	86	56.485	Equus_asinus_asinus
ENSKMAG00000005853	r3hdm4	91	56.485	ENSECAG00000000003	R3HDM4	87	56.485	Equus_caballus
ENSKMAG00000005853	r3hdm4	93	56.800	ENSFCAG00000042437	R3HDM4	92	56.800	Felis_catus
ENSKMAG00000005853	r3hdm4	90	64.378	ENSFALG00000013938	R3HDM4	96	64.378	Ficedula_albicollis
ENSKMAG00000005853	r3hdm4	91	55.649	ENSFDAG00000017040	R3HDM4	97	55.649	Fukomys_damarensis
ENSKMAG00000005853	r3hdm4	100	89.062	ENSFHEG00000017636	r3hdm4	100	89.062	Fundulus_heteroclitus
ENSKMAG00000005853	r3hdm4	95	72.314	ENSGMOG00000001231	r3hdm4	100	72.314	Gadus_morhua
ENSKMAG00000005853	r3hdm4	91	61.765	ENSGALG00000001998	R3HDM4	90	61.765	Gallus_gallus
ENSKMAG00000005853	r3hdm4	100	86.719	ENSGAFG00000004173	r3hdm4	100	86.719	Gambusia_affinis
ENSKMAG00000005853	r3hdm4	100	60.526	ENSGAGG00000019698	R3HDM4	100	60.526	Gopherus_agassizii
ENSKMAG00000005853	r3hdm4	91	56.904	ENSGGOG00000008040	R3HDM4	97	56.904	Gorilla_gorilla
ENSKMAG00000005853	r3hdm4	100	87.109	ENSHBUG00000014810	r3hdm4	100	87.109	Haplochromis_burtoni
ENSKMAG00000005853	r3hdm4	91	55.882	ENSHGLG00000016194	R3HDM4	88	55.882	Heterocephalus_glaber_female
ENSKMAG00000005853	r3hdm4	99	80.392	ENSHCOG00000008422	r3hdm4	99	80.392	Hippocampus_comes
ENSKMAG00000005853	r3hdm4	100	69.767	ENSIPUG00000006716	r3hdm4	100	69.767	Ictalurus_punctatus
ENSKMAG00000005853	r3hdm4	91	53.782	ENSSTOG00000023015	R3HDM4	97	54.393	Ictidomys_tridecemlineatus
ENSKMAG00000005853	r3hdm4	90	55.932	ENSJJAG00000012475	R3hdm4	89	55.932	Jaculus_jaculus
ENSKMAG00000005853	r3hdm4	100	84.375	ENSLBEG00000000730	r3hdm4	100	84.375	Labrus_bergylta
ENSKMAG00000005853	r3hdm4	100	59.924	ENSLACG00000016445	R3HDM4	100	59.924	Latimeria_chalumnae
ENSKMAG00000005853	r3hdm4	100	67.816	ENSLOCG00000002423	r3hdm4	100	68.966	Lepisosteus_oculatus
ENSKMAG00000005853	r3hdm4	91	56.118	ENSLAFG00000017796	R3HDM4	91	56.118	Loxodonta_africana
ENSKMAG00000005853	r3hdm4	91	56.485	ENSMFAG00000044131	R3HDM4	88	56.485	Macaca_fascicularis
ENSKMAG00000005853	r3hdm4	86	57.778	ENSMMUG00000009682	R3HDM4	90	57.778	Macaca_mulatta
ENSKMAG00000005853	r3hdm4	91	56.485	ENSMNEG00000044115	R3HDM4	96	56.485	Macaca_nemestrina
ENSKMAG00000005853	r3hdm4	92	55.738	ENSMLEG00000035693	R3HDM4	89	55.967	Mandrillus_leucophaeus
ENSKMAG00000005853	r3hdm4	87	82.511	ENSMAMG00000005652	r3hdm4	91	82.511	Mastacembelus_armatus
ENSKMAG00000005853	r3hdm4	99	52.075	ENSMAUG00000010611	R3hdm4	99	52.075	Mesocricetus_auratus
ENSKMAG00000005853	r3hdm4	91	56.904	ENSMICG00000010124	R3HDM4	88	56.904	Microcebus_murinus
ENSKMAG00000005853	r3hdm4	99	51.331	ENSMOCG00000002646	R3hdm4	99	52.091	Microtus_ochrogaster
ENSKMAG00000005853	r3hdm4	100	82.812	ENSMMOG00000008253	r3hdm4	100	82.812	Mola_mola
ENSKMAG00000005853	r3hdm4	89	58.696	ENSMODG00000005698	R3HDM4	99	58.696	Monodelphis_domestica
ENSKMAG00000005853	r3hdm4	100	81.641	ENSMALG00000018856	r3hdm4	100	81.641	Monopterus_albus
ENSKMAG00000005853	r3hdm4	91	54.468	MGP_CAROLIEiJ_G0015551	R3hdm4	89	55.319	Mus_caroli
ENSKMAG00000005853	r3hdm4	90	55.603	ENSMUSG00000035781	R3hdm4	99	51.341	Mus_musculus
ENSKMAG00000005853	r3hdm4	91	54.132	MGP_PahariEiJ_G0030964	R3hdm4	92	54.959	Mus_pahari
ENSKMAG00000005853	r3hdm4	99	52.091	MGP_SPRETEiJ_G0016369	-	84	52.091	Mus_spretus
ENSKMAG00000005853	r3hdm4	89	58.798	ENSMPUG00000009394	R3HDM4	86	58.798	Mustela_putorius_furo
ENSKMAG00000005853	r3hdm4	100	86.719	ENSNBRG00000004438	r3hdm4	100	86.719	Neolamprologus_brichardi
ENSKMAG00000005853	r3hdm4	86	53.043	ENSNLEG00000001022	R3HDM4	99	53.043	Nomascus_leucogenys
ENSKMAG00000005853	r3hdm4	91	57.627	ENSMEUG00000011020	R3HDM4	99	57.627	Notamacropus_eugenii
ENSKMAG00000005853	r3hdm4	91	55.462	ENSODEG00000011745	R3HDM4	88	55.462	Octodon_degus
ENSKMAG00000005853	r3hdm4	100	87.500	ENSONIG00000012675	r3hdm4	92	87.500	Oreochromis_niloticus
ENSKMAG00000005853	r3hdm4	100	84.375	ENSOMEG00000003005	r3hdm4	100	84.375	Oryzias_melastigma
ENSKMAG00000005853	r3hdm4	91	55.696	ENSOGAG00000025656	R3HDM4	89	55.696	Otolemur_garnettii
ENSKMAG00000005853	r3hdm4	91	56.904	ENSOARG00000009945	R3HDM4	97	56.904	Ovis_aries
ENSKMAG00000005853	r3hdm4	91	56.485	ENSPPAG00000042371	R3HDM4	97	56.485	Pan_paniscus
ENSKMAG00000005853	r3hdm4	91	56.485	ENSPANG00000015203	R3HDM4	88	56.485	Papio_anubis
ENSKMAG00000005853	r3hdm4	100	64.885	ENSPKIG00000007421	r3hdm4	100	66.794	Paramormyrops_kingsleyae
ENSKMAG00000005853	r3hdm4	100	75.875	ENSPMGG00000020467	r3hdm4	100	75.875	Periophthalmus_magnuspinnatus
ENSKMAG00000005853	r3hdm4	91	56.170	ENSPEMG00000008365	Tmem259	97	56.170	Peromyscus_maniculatus_bairdii
ENSKMAG00000005853	r3hdm4	100	85.156	ENSPFOG00000003199	r3hdm4	100	85.156	Poecilia_formosa
ENSKMAG00000005853	r3hdm4	100	85.156	ENSPMEG00000014183	r3hdm4	100	85.156	Poecilia_mexicana
ENSKMAG00000005853	r3hdm4	100	86.328	ENSPREG00000010709	r3hdm4	100	86.328	Poecilia_reticulata
ENSKMAG00000005853	r3hdm4	91	56.540	ENSPPYG00000009297	R3HDM4	88	56.540	Pongo_abelii
ENSKMAG00000005853	r3hdm4	58	57.616	ENSPCAG00000010997	R3HDM4	55	57.616	Procavia_capensis
ENSKMAG00000005853	r3hdm4	100	53.676	ENSPCOG00000016785	R3HDM4	100	53.676	Propithecus_coquereli
ENSKMAG00000005853	r3hdm4	100	87.109	ENSPNYG00000017489	r3hdm4	100	87.109	Pundamilia_nyererei
ENSKMAG00000005853	r3hdm4	91	54.468	ENSRNOG00000011489	R3hdm4	89	55.319	Rattus_norvegicus
ENSKMAG00000005853	r3hdm4	91	56.485	ENSRROG00000028842	R3HDM4	88	56.485	Rhinopithecus_roxellana
ENSKMAG00000005853	r3hdm4	91	56.225	ENSSBOG00000019298	R3HDM4	73	56.225	Saimiri_boliviensis_boliviensis
ENSKMAG00000005853	r3hdm4	56	59.589	ENSSHAG00000003036	-	100	59.589	Sarcophilus_harrisii
ENSKMAG00000005853	r3hdm4	96	74.797	ENSSFOG00015020574	r3hdm4	91	74.297	Scleropages_formosus
ENSKMAG00000005853	r3hdm4	100	82.422	ENSSMAG00000021090	r3hdm4	74	82.422	Scophthalmus_maximus
ENSKMAG00000005853	r3hdm4	100	86.328	ENSSDUG00000008488	r3hdm4	100	86.328	Seriola_dumerili
ENSKMAG00000005853	r3hdm4	100	86.328	ENSSLDG00000025328	r3hdm4	100	86.328	Seriola_lalandi_dorsalis
ENSKMAG00000005853	r3hdm4	92	61.250	ENSSPUG00000005434	R3HDM4	93	61.250	Sphenodon_punctatus
ENSKMAG00000005853	r3hdm4	99	78.516	ENSSPAG00000002562	r3hdm4	99	78.516	Stegastes_partitus
ENSKMAG00000005853	r3hdm4	93	56.400	ENSSSCG00000013419	R3HDM4	91	56.400	Sus_scrofa
ENSKMAG00000005853	r3hdm4	77	55.172	ENSTGUG00000000663	R3HDM4	97	55.665	Taeniopygia_guttata
ENSKMAG00000005853	r3hdm4	91	56.356	ENSTTRG00000001470	R3HDM4	97	56.904	Tursiops_truncatus
ENSKMAG00000005853	r3hdm4	93	50.403	ENSUAMG00000005751	R3HDM4	100	56.889	Ursus_americanus
ENSKMAG00000005853	r3hdm4	93	56.000	ENSVVUG00000022685	R3HDM4	91	56.000	Vulpes_vulpes
ENSKMAG00000005853	r3hdm4	96	47.773	ENSXETG00000033624	R3HDM4	96	47.773	Xenopus_tropicalis
ENSKMAG00000005853	r3hdm4	100	85.214	ENSXCOG00000005127	r3hdm4	100	85.214	Xiphophorus_couchianus
ENSKMAG00000005853	r3hdm4	100	85.547	ENSXMAG00000022875	r3hdm4	100	85.547	Xiphophorus_maculatus