EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000005854 (Gene tree)
Gene ID: 108242269
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 15601 bases
Position: chrLWHD01000099.1:769885-785485
Accession: 108242269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000007796	KH_1	PF00013.29	4.4e-06	1	1
ENSKMAP00000007796	zf-CCHC	PF00098.23	0.00045	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000007920	-	4527	XM_025008248	ENSKMAP00000007796	651 (aa)	XP_024864016	-

Gene Model

Click here to download ENSKMAG00000005854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005854	sf1	91	91.092	ENSAPOG00000012341	sf1	84	91.228	Acanthochromis_polyacanthus
ENSKMAG00000005854	sf1	70	84.615	ENSACIG00000016514	sf1	66	84.532	Amphilophus_citrinellus
ENSKMAG00000005854	sf1	91	90.588	ENSAOCG00000010934	sf1	84	91.404	Amphiprion_ocellaris
ENSKMAG00000005854	sf1	91	90.588	ENSAPEG00000009498	sf1	84	91.404	Amphiprion_percula
ENSKMAG00000005854	sf1	70	89.497	ENSATEG00000001894	sf1	84	91.419	Anabas_testudineus
ENSKMAG00000005854	sf1	63	78.689	ENSANAG00000026664	-	91	81.841	Aotus_nancymaae
ENSKMAG00000005854	sf1	75	64.571	ENSANAG00000022607	-	89	73.210	Aotus_nancymaae
ENSKMAG00000005854	sf1	70	87.253	ENSACLG00000007633	sf1	70	87.800	Astatotilapia_calliptera
ENSKMAG00000005854	sf1	72	82.166	ENSAMXG00000003630	sf1	61	80.932	Astyanax_mexicanus
ENSKMAG00000005854	sf1	63	77.283	ENSBTAG00000001035	SF1	63	82.398	Bos_taurus
ENSKMAG00000005854	sf1	63	77.283	ENSCJAG00000002780	SF1	75	68.714	Callithrix_jacchus
ENSKMAG00000005854	sf1	63	77.283	ENSCAFG00000014239	SF1	60	82.398	Canis_familiaris
ENSKMAG00000005854	sf1	63	77.283	ENSCAFG00020014381	SF1	60	82.398	Canis_lupus_dingo
ENSKMAG00000005854	sf1	63	77.283	ENSCHIG00000025867	SF1	60	82.398	Capra_hircus
ENSKMAG00000005854	sf1	61	77.966	ENSCAPG00000010762	SF1	66	83.862	Cavia_aperea
ENSKMAG00000005854	sf1	62	77.619	ENSCPOG00000012290	SF1	59	83.508	Cavia_porcellus
ENSKMAG00000005854	sf1	63	70.238	ENSCCAG00000023781	-	85	71.355	Cebus_capucinus
ENSKMAG00000005854	sf1	63	77.283	ENSCCAG00000037881	SF1	91	81.841	Cebus_capucinus
ENSKMAG00000005854	sf1	63	77.283	ENSCATG00000011564	SF1	91	81.841	Cercocebus_atys
ENSKMAG00000005854	sf1	59	73.116	ENSCHOG00000006008	SF1	67	78.237	Choloepus_hoffmanni
ENSKMAG00000005854	sf1	64	83.294	ENSCPBG00000023763	SF1	51	83.582	Chrysemys_picta_bellii
ENSKMAG00000005854	sf1	62	56.595	ENSCING00000005564	-	92	53.879	Ciona_intestinalis
ENSKMAG00000005854	sf1	63	58.852	ENSCSAVG00000009055	-	72	60.912	Ciona_savignyi
ENSKMAG00000005854	sf1	63	77.283	ENSCANG00000042201	SF1	91	81.841	Colobus_angolensis_palliatus
ENSKMAG00000005854	sf1	63	77.518	ENSCGRG00001003677	Sf1	67	82.908	Cricetulus_griseus_chok1gshd
ENSKMAG00000005854	sf1	61	78.692	ENSCGRG00000001708	Sf1	66	84.031	Cricetulus_griseus_crigri
ENSKMAG00000005854	sf1	87	87.741	ENSCSEG00000014375	sf1	66	88.286	Cynoglossus_semilaevis
ENSKMAG00000005854	sf1	87	91.053	ENSCVAG00000001670	sf1	68	91.285	Cyprinodon_variegatus
ENSKMAG00000005854	sf1	68	90.331	ENSDARG00000008188	sf1	68	90.331	Danio_rerio
ENSKMAG00000005854	sf1	63	77.283	ENSDORG00000016334	Sf1	60	82.398	Dipodomys_ordii
ENSKMAG00000005854	sf1	61	71.429	ENSETEG00000012830	SF1	52	74.868	Echinops_telfairi
ENSKMAG00000005854	sf1	90	47.153	ENSEBUG00000012728	sf1	61	55.556	Eptatretus_burgeri
ENSKMAG00000005854	sf1	55	78.610	ENSEEUG00000001058	SF1	84	84.024	Erinaceus_europaeus
ENSKMAG00000005854	sf1	80	77.757	ENSELUG00000013225	sf1	61	82.692	Esox_lucius
ENSKMAG00000005854	sf1	63	77.283	ENSFCAG00000012231	SF1	75	69.112	Felis_catus
ENSKMAG00000005854	sf1	62	78.043	ENSFDAG00000009833	SF1	66	83.862	Fukomys_damarensis
ENSKMAG00000005854	sf1	91	87.899	ENSFHEG00000022656	sf1	84	89.631	Fundulus_heteroclitus
ENSKMAG00000005854	sf1	75	77.347	ENSGMOG00000007469	sf1	61	91.343	Gadus_morhua
ENSKMAG00000005854	sf1	91	91.107	ENSGAFG00000019284	sf1	74	91.939	Gambusia_affinis
ENSKMAG00000005854	sf1	59	89.583	ENSGACG00000000826	sf1	66	89.764	Gasterosteus_aculeatus
ENSKMAG00000005854	sf1	64	83.059	ENSGAGG00000021691	SF1	70	71.657	Gopherus_agassizii
ENSKMAG00000005854	sf1	70	89.278	ENSHBUG00000011598	sf1	67	89.325	Haplochromis_burtoni
ENSKMAG00000005854	sf1	63	77.283	ENSHGLG00000009541	SF1	67	82.398	Heterocephalus_glaber_female
ENSKMAG00000005854	sf1	57	71.744	ENSHGLG00100008255	-	75	74.490	Heterocephalus_glaber_male
ENSKMAG00000005854	sf1	61	78.450	ENSHGLG00100013879	-	65	84.874	Heterocephalus_glaber_male
ENSKMAG00000005854	sf1	72	84.534	ENSHCOG00000011388	sf1	84	85.614	Hippocampus_comes
ENSKMAG00000005854	sf1	61	78.450	ENSSTOG00000009790	-	59	83.508	Ictidomys_tridecemlineatus
ENSKMAG00000005854	sf1	66	69.074	ENSSTOG00000024353	-	69	72.634	Ictidomys_tridecemlineatus
ENSKMAG00000005854	sf1	63	77.518	ENSJJAG00000011788	Sf1	60	82.653	Jaculus_jaculus
ENSKMAG00000005854	sf1	70	88.197	ENSLBEG00000019836	sf1	64	86.878	Labrus_bergylta
ENSKMAG00000005854	sf1	76	72.673	ENSLACG00000018493	SF1	68	80.585	Latimeria_chalumnae
ENSKMAG00000005854	sf1	70	79.915	ENSLOCG00000002130	sf1	73	79.665	Lepisosteus_oculatus
ENSKMAG00000005854	sf1	62	79.714	ENSLAFG00000007201	SF1	64	83.594	Loxodonta_africana
ENSKMAG00000005854	sf1	63	77.283	ENSMFAG00000033122	SF1	91	81.841	Macaca_fascicularis
ENSKMAG00000005854	sf1	63	77.283	ENSMMUG00000022606	SF1	91	83.290	Macaca_mulatta
ENSKMAG00000005854	sf1	63	77.283	ENSMNEG00000037901	SF1	91	81.841	Macaca_nemestrina
ENSKMAG00000005854	sf1	62	78.230	ENSMLEG00000040706	SF1	91	81.795	Mandrillus_leucophaeus
ENSKMAG00000005854	sf1	70	89.716	ENSMAMG00000001780	sf1	84	90.718	Mastacembelus_armatus
ENSKMAG00000005854	sf1	70	89.278	ENSMZEG00005009196	sf1	67	89.325	Maylandia_zebra
ENSKMAG00000005854	sf1	63	77.518	ENSMAUG00000014064	Sf1	67	82.908	Mesocricetus_auratus
ENSKMAG00000005854	sf1	63	77.283	ENSMICG00000001202	SF1	91	81.633	Microcebus_murinus
ENSKMAG00000005854	sf1	63	77.518	ENSMOCG00000022038	Sf1	67	82.653	Microtus_ochrogaster
ENSKMAG00000005854	sf1	89	85.445	ENSMMOG00000020474	sf1	84	87.895	Mola_mola
ENSKMAG00000005854	sf1	62	78.282	ENSMODG00000029407	SF1	81	83.551	Monodelphis_domestica
ENSKMAG00000005854	sf1	87	83.803	ENSMALG00000020521	sf1	92	85.915	Monopterus_albus
ENSKMAG00000005854	sf1	63	77.518	MGP_CAROLIEiJ_G0022607	Sf1	99	94.737	Mus_caroli
ENSKMAG00000005854	sf1	63	77.518	ENSMUSG00000024949	Sf1	99	94.737	Mus_musculus
ENSKMAG00000005854	sf1	63	77.518	MGP_PahariEiJ_G0014101	Sf1	99	94.737	Mus_pahari
ENSKMAG00000005854	sf1	63	77.518	MGP_SPRETEiJ_G0023518	Sf1	99	94.737	Mus_spretus
ENSKMAG00000005854	sf1	62	77.910	ENSMPUG00000012684	SF1	59	83.161	Mustela_putorius_furo
ENSKMAG00000005854	sf1	62	77.725	ENSMLUG00000015217	-	59	82.687	Myotis_lucifugus
ENSKMAG00000005854	sf1	68	72.985	ENSMLUG00000029800	-	66	78.061	Myotis_lucifugus
ENSKMAG00000005854	sf1	63	77.518	ENSNGAG00000005550	Sf1	67	82.653	Nannospalax_galili
ENSKMAG00000005854	sf1	70	87.253	ENSNBRG00000017606	sf1	68	87.800	Neolamprologus_brichardi
ENSKMAG00000005854	sf1	63	77.283	ENSNLEG00000005236	-	91	81.841	Nomascus_leucogenys
ENSKMAG00000005854	sf1	60	79.024	ENSMEUG00000013424	SF1	69	84.267	Notamacropus_eugenii
ENSKMAG00000005854	sf1	70	89.278	ENSONIG00000015728	sf1	67	89.325	Oreochromis_niloticus
ENSKMAG00000005854	sf1	51	74.855	ENSOANG00000002909	SF1	77	75.232	Ornithorhynchus_anatinus
ENSKMAG00000005854	sf1	62	77.619	ENSOCUG00000026486	SF1	60	83.377	Oryctolagus_cuniculus
ENSKMAG00000005854	sf1	72	87.339	ENSORLG00000011853	sf1	67	87.555	Oryzias_latipes
ENSKMAG00000005854	sf1	72	87.339	ENSORLG00020011834	sf1	67	87.555	Oryzias_latipes_hni
ENSKMAG00000005854	sf1	70	86.900	ENSORLG00015012855	sf1	68	86.596	Oryzias_latipes_hsok
ENSKMAG00000005854	sf1	87	89.437	ENSOMEG00000005210	sf1	84	89.437	Oryzias_melastigma
ENSKMAG00000005854	sf1	63	77.283	ENSOGAG00000016196	SF1	60	82.398	Otolemur_garnettii
ENSKMAG00000005854	sf1	63	77.283	ENSOARG00000009166	SF1	67	82.398	Ovis_aries
ENSKMAG00000005854	sf1	62	78.759	ENSPPAG00000002799	-	91	82.597	Pan_paniscus
ENSKMAG00000005854	sf1	62	78.230	ENSPPRG00000013566	SF1	58	84.384	Panthera_pardus
ENSKMAG00000005854	sf1	63	77.230	ENSPTIG00000016141	SF1	68	82.990	Panthera_tigris_altaica
ENSKMAG00000005854	sf1	64	77.471	ENSPTRG00000003846	SF1	91	81.841	Pan_troglodytes
ENSKMAG00000005854	sf1	63	77.283	ENSPANG00000020754	SF1	91	81.841	Papio_anubis
ENSKMAG00000005854	sf1	50	80.415	ENSPKIG00000012116	sf1	83	78.979	Paramormyrops_kingsleyae
ENSKMAG00000005854	sf1	63	77.518	ENSPEMG00000010463	Sf1	67	82.908	Peromyscus_maniculatus_bairdii
ENSKMAG00000005854	sf1	51	71.687	ENSPMAG00000008272	sf1	56	63.659	Petromyzon_marinus
ENSKMAG00000005854	sf1	63	77.752	ENSPCIG00000018173	SF1	62	82.653	Phascolarctos_cinereus
ENSKMAG00000005854	sf1	87	91.930	ENSPFOG00000013683	sf1	68	92.157	Poecilia_formosa
ENSKMAG00000005854	sf1	80	91.969	ENSPLAG00000018076	sf1	63	92.233	Poecilia_latipinna
ENSKMAG00000005854	sf1	87	91.754	ENSPMEG00000005726	sf1	68	91.939	Poecilia_mexicana
ENSKMAG00000005854	sf1	91	91.275	ENSPREG00000004155	sf1	68	91.721	Poecilia_reticulata
ENSKMAG00000005854	sf1	63	77.283	ENSPPYG00000003098	-	72	82.398	Pongo_abelii
ENSKMAG00000005854	sf1	69	71.706	ENSPCAG00000013631	SF1	75	67.823	Procavia_capensis
ENSKMAG00000005854	sf1	63	77.283	ENSPCOG00000027546	SF1	91	81.633	Propithecus_coquereli
ENSKMAG00000005854	sf1	63	76.869	ENSPVAG00000016938	SF1	75	70.175	Pteropus_vampyrus
ENSKMAG00000005854	sf1	70	88.403	ENSPNYG00000004673	sf1	67	89.107	Pundamilia_nyererei
ENSKMAG00000005854	sf1	70	81.400	ENSPNAG00000013072	sf1	69	80.255	Pygocentrus_nattereri
ENSKMAG00000005854	sf1	63	77.518	ENSRNOG00000021085	Sf1	60	82.398	Rattus_norvegicus
ENSKMAG00000005854	sf1	63	77.283	ENSRBIG00000042818	SF1	91	81.841	Rhinopithecus_bieti
ENSKMAG00000005854	sf1	62	78.230	ENSRROG00000045655	SF1	92	81.795	Rhinopithecus_roxellana
ENSKMAG00000005854	sf1	62	36.597	YLR116W	MSL5	56	44.565	Saccharomyces_cerevisiae
ENSKMAG00000005854	sf1	78	62.362	ENSSBOG00000022267	-	91	67.857	Saimiri_boliviensis_boliviensis
ENSKMAG00000005854	sf1	75	71.255	ENSSHAG00000006841	SF1	71	83.420	Sarcophilus_harrisii
ENSKMAG00000005854	sf1	73	79.834	ENSSFOG00015021978	sf1	68	78.858	Scleropages_formosus
ENSKMAG00000005854	sf1	87	86.082	ENSSMAG00000007549	sf1	71	87.473	Scophthalmus_maximus
ENSKMAG00000005854	sf1	70	90.393	ENSSDUG00000003903	sf1	72	90.928	Seriola_dumerili
ENSKMAG00000005854	sf1	70	90.175	ENSSLDG00000013075	sf1	84	91.958	Seriola_lalandi_dorsalis
ENSKMAG00000005854	sf1	61	73.608	ENSSARG00000008180	SF1	72	78.796	Sorex_araneus
ENSKMAG00000005854	sf1	61	79.953	ENSSPUG00000012907	SF1	59	86.872	Sphenodon_punctatus
ENSKMAG00000005854	sf1	91	90.588	ENSSPAG00000019060	sf1	84	91.404	Stegastes_partitus
ENSKMAG00000005854	sf1	63	77.283	ENSSSCG00000013021	SF1	60	82.398	Sus_scrofa
ENSKMAG00000005854	sf1	76	71.004	ENSTNIG00000004820	sf1	74	76.000	Tetraodon_nigroviridis
ENSKMAG00000005854	sf1	63	70.714	ENSTBEG00000013133	SF1	55	74.740	Tupaia_belangeri
ENSKMAG00000005854	sf1	69	72.323	ENSUMAG00000007268	SF1	72	83.161	Ursus_maritimus
ENSKMAG00000005854	sf1	78	73.025	ENSXETG00000008434	sf1	64	82.713	Xenopus_tropicalis
ENSKMAG00000005854	sf1	56	94.231	ENSXCOG00000003704	sf1	69	94.262	Xiphophorus_couchianus
ENSKMAG00000005854	sf1	91	91.107	ENSXMAG00000007822	sf1	70	91.721	Xiphophorus_maculatus