EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000005954 (Gene tree)
Gene ID: 108230783
Gene Symbol: polr2eb
Alias: fk97g10|polr2e|wu:fk97g10|zgc:101098
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4781 bases
Position: chrLWHD01000009.1:6129016-6133796
Accession: 108230783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000007935	RNA_pol_Rpb5_N	PF03871.14	7.3e-35	1	1
ENSKMAP00000007935	RNA_pol_Rpb5_C	PF01191.19	9.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008059	-	900	XM_017407311	ENSKMAP00000007935	210 (aa)	XP_017262800	UPI0000318DEB

Gene Model

Click here to download ENSKMAG00000005954's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG
kmr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005954	polr2eb	100	95.238	ENSG00000099817	POLR2E	100	95.238	Homo_sapiens
ENSKMAG00000005954	polr2eb	100	100.000	ENSAPOG00000002935	polr2eb	100	100.000	Acanthochromis_polyacanthus
ENSKMAG00000005954	polr2eb	100	95.714	ENSAMEG00000003159	POLR2E	100	95.714	Ailuropoda_melanoleuca
ENSKMAG00000005954	polr2eb	100	86.667	ENSACIG00000024371	polr2eb	100	86.667	Amphilophus_citrinellus
ENSKMAG00000005954	polr2eb	100	100.000	ENSAOCG00000018166	polr2eb	100	100.000	Amphiprion_ocellaris
ENSKMAG00000005954	polr2eb	100	100.000	ENSAPEG00000009000	polr2eb	100	100.000	Amphiprion_percula
ENSKMAG00000005954	polr2eb	100	100.000	ENSATEG00000023760	polr2eb	100	100.000	Anabas_testudineus
ENSKMAG00000005954	polr2eb	100	95.714	ENSANAG00000038488	POLR2E	100	95.714	Aotus_nancymaae
ENSKMAG00000005954	polr2eb	100	99.524	ENSACLG00000005254	polr2eb	100	99.524	Astatotilapia_calliptera
ENSKMAG00000005954	polr2eb	100	99.524	ENSAMXG00000018915	POLR2E	100	99.524	Astyanax_mexicanus
ENSKMAG00000005954	polr2eb	100	95.714	ENSBTAG00000020776	POLR2E	100	95.714	Bos_taurus
ENSKMAG00000005954	polr2eb	99	78.846	WBGene00019246	rpb-5	99	78.846	Caenorhabditis_elegans
ENSKMAG00000005954	polr2eb	67	90.714	ENSCJAG00000007666	-	77	90.714	Callithrix_jacchus
ENSKMAG00000005954	polr2eb	100	92.857	ENSCAFG00000019546	POLR2E	100	92.857	Canis_familiaris
ENSKMAG00000005954	polr2eb	100	95.714	ENSCAFG00020017111	POLR2E	100	95.714	Canis_lupus_dingo
ENSKMAG00000005954	polr2eb	100	95.714	ENSCHIG00000014151	POLR2E	100	95.714	Capra_hircus
ENSKMAG00000005954	polr2eb	100	78.605	ENSTSYG00000026377	POLR2E	100	78.605	Carlito_syrichta
ENSKMAG00000005954	polr2eb	91	95.312	ENSCAPG00000010843	POLR2E	93	95.312	Cavia_aperea
ENSKMAG00000005954	polr2eb	100	95.714	ENSCPOG00000001542	POLR2E	100	95.714	Cavia_porcellus
ENSKMAG00000005954	polr2eb	100	95.714	ENSCCAG00000025658	POLR2E	100	95.714	Cebus_capucinus
ENSKMAG00000005954	polr2eb	100	95.714	ENSCATG00000008926	POLR2E	100	95.714	Cercocebus_atys
ENSKMAG00000005954	polr2eb	98	73.171	ENSCLAG00000009238	-	100	73.171	Chinchilla_lanigera
ENSKMAG00000005954	polr2eb	100	95.238	ENSCLAG00000014874	-	100	95.238	Chinchilla_lanigera
ENSKMAG00000005954	polr2eb	100	95.714	ENSCSAG00000012336	POLR2E	100	95.714	Chlorocebus_sabaeus
ENSKMAG00000005954	polr2eb	100	96.190	ENSCPBG00000009702	POLR2E	100	96.190	Chrysemys_picta_bellii
ENSKMAG00000005954	polr2eb	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSKMAG00000005954	polr2eb	100	95.714	ENSCANG00000025560	POLR2E	100	95.714	Colobus_angolensis_palliatus
ENSKMAG00000005954	polr2eb	100	95.714	ENSCGRG00001022927	Polr2e	100	95.714	Cricetulus_griseus_chok1gshd
ENSKMAG00000005954	polr2eb	100	89.302	ENSCGRG00000016441	Polr2e	100	89.302	Cricetulus_griseus_crigri
ENSKMAG00000005954	polr2eb	100	98.095	ENSCSEG00000007107	polr2eb	92	98.095	Cynoglossus_semilaevis
ENSKMAG00000005954	polr2eb	100	100.000	ENSCVAG00000019940	polr2eb	100	100.000	Cyprinodon_variegatus
ENSKMAG00000005954	polr2eb	100	99.048	ENSDARG00000026183	polr2eb	100	99.048	Danio_rerio
ENSKMAG00000005954	polr2eb	90	95.263	ENSDNOG00000044994	POLR2E	84	95.263	Dasypus_novemcinctus
ENSKMAG00000005954	polr2eb	100	95.714	ENSDORG00000001154	Polr2e	100	95.714	Dipodomys_ordii
ENSKMAG00000005954	polr2eb	99	85.646	FBgn0033571	Rpb5	99	85.646	Drosophila_melanogaster
ENSKMAG00000005954	polr2eb	75	92.357	ENSEBUG00000010159	-	76	92.357	Eptatretus_burgeri
ENSKMAG00000005954	polr2eb	69	88.966	ENSEASG00005021615	POLR2E	67	83.333	Equus_asinus_asinus
ENSKMAG00000005954	polr2eb	91	94.241	ENSECAG00000011124	POLR2E	100	82.857	Equus_caballus
ENSKMAG00000005954	polr2eb	100	97.143	ENSELUG00000020646	polr2e	100	97.143	Esox_lucius
ENSKMAG00000005954	polr2eb	100	98.095	ENSELUG00000005815	POLR2E	100	98.095	Esox_lucius
ENSKMAG00000005954	polr2eb	100	95.238	ENSFCAG00000007318	POLR2E	100	95.238	Felis_catus
ENSKMAG00000005954	polr2eb	91	95.833	ENSFALG00000013986	POLR2E	99	95.833	Ficedula_albicollis
ENSKMAG00000005954	polr2eb	100	95.714	ENSFDAG00000014539	POLR2E	100	95.714	Fukomys_damarensis
ENSKMAG00000005954	polr2eb	100	100.000	ENSFHEG00000022398	polr2eb	100	100.000	Fundulus_heteroclitus
ENSKMAG00000005954	polr2eb	100	98.571	ENSGMOG00000007615	polr2eb	100	98.571	Gadus_morhua
ENSKMAG00000005954	polr2eb	100	96.190	ENSGALG00000002591	POLR2E	100	96.190	Gallus_gallus
ENSKMAG00000005954	polr2eb	100	99.524	ENSGAFG00000005087	polr2eb	100	99.524	Gambusia_affinis
ENSKMAG00000005954	polr2eb	100	98.571	ENSGACG00000013247	polr2eb	100	98.571	Gasterosteus_aculeatus
ENSKMAG00000005954	polr2eb	100	96.190	ENSGAGG00000008356	POLR2E	100	96.190	Gopherus_agassizii
ENSKMAG00000005954	polr2eb	100	95.714	ENSGGOG00000011267	POLR2E	100	95.714	Gorilla_gorilla
ENSKMAG00000005954	polr2eb	68	95.070	ENSHBUG00000011099	polr2eb	100	95.070	Haplochromis_burtoni
ENSKMAG00000005954	polr2eb	100	95.714	ENSHGLG00000013330	POLR2E	100	95.714	Heterocephalus_glaber_female
ENSKMAG00000005954	polr2eb	100	95.714	ENSHGLG00100011014	POLR2E	100	95.714	Heterocephalus_glaber_male
ENSKMAG00000005954	polr2eb	100	98.571	ENSHCOG00000000906	polr2eb	100	98.571	Hippocampus_comes
ENSKMAG00000005954	polr2eb	53	96.429	ENSHCOG00000012099	-	88	96.429	Hippocampus_comes
ENSKMAG00000005954	polr2eb	100	100.000	ENSIPUG00000019801	polr2e	100	100.000	Ictalurus_punctatus
ENSKMAG00000005954	polr2eb	100	95.714	ENSSTOG00000002853	POLR2E	100	95.714	Ictidomys_tridecemlineatus
ENSKMAG00000005954	polr2eb	77	78.882	ENSJJAG00000015812	-	100	78.882	Jaculus_jaculus
ENSKMAG00000005954	polr2eb	100	95.714	ENSJJAG00000016595	-	100	95.714	Jaculus_jaculus
ENSKMAG00000005954	polr2eb	100	77.619	ENSJJAG00000003145	-	100	77.619	Jaculus_jaculus
ENSKMAG00000005954	polr2eb	100	100.000	ENSLBEG00000024802	polr2eb	100	100.000	Labrus_bergylta
ENSKMAG00000005954	polr2eb	100	96.667	ENSLACG00000013686	POLR2E	100	96.667	Latimeria_chalumnae
ENSKMAG00000005954	polr2eb	77	99.383	ENSLOCG00000004599	POLR2E	100	99.383	Lepisosteus_oculatus
ENSKMAG00000005954	polr2eb	100	76.415	ENSLAFG00000025587	POLR2E	100	76.415	Loxodonta_africana
ENSKMAG00000005954	polr2eb	100	95.714	ENSMFAG00000002884	POLR2E	100	95.714	Macaca_fascicularis
ENSKMAG00000005954	polr2eb	100	95.714	ENSMMUG00000013927	POLR2E	100	95.714	Macaca_mulatta
ENSKMAG00000005954	polr2eb	100	95.714	ENSMNEG00000034046	-	100	95.714	Macaca_nemestrina
ENSKMAG00000005954	polr2eb	100	64.455	ENSMNEG00000033452	-	100	64.455	Macaca_nemestrina
ENSKMAG00000005954	polr2eb	92	78.756	ENSMLEG00000012405	POLR2E	94	78.756	Mandrillus_leucophaeus
ENSKMAG00000005954	polr2eb	100	100.000	ENSMAMG00000018703	polr2eb	100	100.000	Mastacembelus_armatus
ENSKMAG00000005954	polr2eb	90	99.474	ENSMZEG00005010796	polr2eb	96	99.474	Maylandia_zebra
ENSKMAG00000005954	polr2eb	100	95.261	ENSMGAG00000003769	POLR2E	100	95.261	Meleagris_gallopavo
ENSKMAG00000005954	polr2eb	92	94.819	ENSMAUG00000010125	-	100	95.288	Mesocricetus_auratus
ENSKMAG00000005954	polr2eb	100	64.762	ENSMAUG00000011003	-	100	64.762	Mesocricetus_auratus
ENSKMAG00000005954	polr2eb	100	95.714	ENSMICG00000013063	POLR2E	100	95.714	Microcebus_murinus
ENSKMAG00000005954	polr2eb	100	95.714	ENSMOCG00000013414	Polr2e	100	95.714	Microtus_ochrogaster
ENSKMAG00000005954	polr2eb	91	89.005	ENSMMOG00000001167	polr2eb	88	89.005	Mola_mola
ENSKMAG00000005954	polr2eb	100	85.238	ENSMMOG00000001161	polr2eb	100	85.238	Mola_mola
ENSKMAG00000005954	polr2eb	100	96.190	ENSMODG00000005494	POLR2E	100	96.190	Monodelphis_domestica
ENSKMAG00000005954	polr2eb	100	99.048	ENSMALG00000021888	polr2eb	100	99.048	Monopterus_albus
ENSKMAG00000005954	polr2eb	100	95.714	MGP_CAROLIEiJ_G0015561	Polr2e	100	95.714	Mus_caroli
ENSKMAG00000005954	polr2eb	100	95.714	ENSMUSG00000004667	Polr2e	100	95.714	Mus_musculus
ENSKMAG00000005954	polr2eb	100	95.714	MGP_PahariEiJ_G0030974	Polr2e	100	95.714	Mus_pahari
ENSKMAG00000005954	polr2eb	100	95.714	MGP_SPRETEiJ_G0016379	Polr2e	100	95.714	Mus_spretus
ENSKMAG00000005954	polr2eb	100	94.762	ENSMPUG00000008953	POLR2E	100	94.762	Mustela_putorius_furo
ENSKMAG00000005954	polr2eb	66	90.580	ENSMLUG00000006376	-	100	79.630	Myotis_lucifugus
ENSKMAG00000005954	polr2eb	100	95.714	ENSMLUG00000013193	POLR2E	100	95.714	Myotis_lucifugus
ENSKMAG00000005954	polr2eb	100	95.714	ENSNGAG00000001147	Polr2e	100	95.714	Nannospalax_galili
ENSKMAG00000005954	polr2eb	85	72.626	ENSNGAG00000017344	-	96	72.626	Nannospalax_galili
ENSKMAG00000005954	polr2eb	100	86.667	ENSNBRG00000022772	polr2eb	100	86.667	Neolamprologus_brichardi
ENSKMAG00000005954	polr2eb	100	91.943	ENSNLEG00000001207	-	100	91.943	Nomascus_leucogenys
ENSKMAG00000005954	polr2eb	100	73.333	ENSNLEG00000031364	-	100	73.333	Nomascus_leucogenys
ENSKMAG00000005954	polr2eb	100	84.286	ENSOPRG00000008331	POLR2E	100	84.286	Ochotona_princeps
ENSKMAG00000005954	polr2eb	89	84.946	ENSODEG00000007985	-	100	84.946	Octodon_degus
ENSKMAG00000005954	polr2eb	100	69.048	ENSODEG00000011490	-	100	69.048	Octodon_degus
ENSKMAG00000005954	polr2eb	100	95.714	ENSODEG00000013230	-	100	95.714	Octodon_degus
ENSKMAG00000005954	polr2eb	100	99.048	ENSONIG00000002519	polr2eb	100	99.048	Oreochromis_niloticus
ENSKMAG00000005954	polr2eb	100	99.524	ENSORLG00000015346	polr2eb	100	99.524	Oryzias_latipes
ENSKMAG00000005954	polr2eb	100	99.524	ENSORLG00020020700	polr2e	100	99.524	Oryzias_latipes_hni
ENSKMAG00000005954	polr2eb	100	99.524	ENSORLG00015016842	polr2e	100	99.524	Oryzias_latipes_hsok
ENSKMAG00000005954	polr2eb	100	100.000	ENSOMEG00000002709	polr2eb	100	100.000	Oryzias_melastigma
ENSKMAG00000005954	polr2eb	100	95.714	ENSOGAG00000012311	POLR2E	100	95.714	Otolemur_garnettii
ENSKMAG00000005954	polr2eb	100	95.714	ENSOARG00000010994	POLR2E	100	95.714	Ovis_aries
ENSKMAG00000005954	polr2eb	91	95.288	ENSPPAG00000003145	POLR2E	100	95.288	Pan_paniscus
ENSKMAG00000005954	polr2eb	100	95.238	ENSPPRG00000000777	POLR2E	100	95.238	Panthera_pardus
ENSKMAG00000005954	polr2eb	91	73.438	ENSPTIG00000012237	POLR2E	98	90.132	Panthera_tigris_altaica
ENSKMAG00000005954	polr2eb	100	95.714	ENSPTRG00000010183	POLR2E	100	95.714	Pan_troglodytes
ENSKMAG00000005954	polr2eb	100	95.714	ENSPANG00000018011	POLR2E	100	95.714	Papio_anubis
ENSKMAG00000005954	polr2eb	100	98.571	ENSPKIG00000009607	POLR2E	100	98.571	Paramormyrops_kingsleyae
ENSKMAG00000005954	polr2eb	100	98.571	ENSPKIG00000024123	POLR2E	100	98.571	Paramormyrops_kingsleyae
ENSKMAG00000005954	polr2eb	98	92.195	ENSPSIG00000002870	POLR2E	99	92.195	Pelodiscus_sinensis
ENSKMAG00000005954	polr2eb	100	87.143	ENSPMGG00000014354	polr2eb	100	87.143	Periophthalmus_magnuspinnatus
ENSKMAG00000005954	polr2eb	100	95.714	ENSPEMG00000023261	Polr2e	100	95.714	Peromyscus_maniculatus_bairdii
ENSKMAG00000005954	polr2eb	90	95.767	ENSPCIG00000007312	POLR2E	75	95.767	Phascolarctos_cinereus
ENSKMAG00000005954	polr2eb	100	99.524	ENSPFOG00000005734	polr2eb	100	99.524	Poecilia_formosa
ENSKMAG00000005954	polr2eb	100	99.524	ENSPLAG00000014496	polr2eb	100	99.524	Poecilia_latipinna
ENSKMAG00000005954	polr2eb	100	99.524	ENSPMEG00000008053	polr2eb	100	99.524	Poecilia_mexicana
ENSKMAG00000005954	polr2eb	100	99.524	ENSPREG00000006489	polr2eb	100	99.524	Poecilia_reticulata
ENSKMAG00000005954	polr2eb	100	88.152	ENSPPYG00000009305	POLR2E	100	88.152	Pongo_abelii
ENSKMAG00000005954	polr2eb	53	93.694	ENSPCAG00000016605	POLR2E	100	93.694	Procavia_capensis
ENSKMAG00000005954	polr2eb	100	95.714	ENSPCOG00000014491	POLR2E	100	95.714	Propithecus_coquereli
ENSKMAG00000005954	polr2eb	65	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSKMAG00000005954	polr2eb	90	99.474	ENSPNYG00000019797	polr2eb	96	99.474	Pundamilia_nyererei
ENSKMAG00000005954	polr2eb	100	99.048	ENSPNAG00000026263	POLR2E	100	99.048	Pygocentrus_nattereri
ENSKMAG00000005954	polr2eb	100	95.714	ENSRNOG00000013545	Polr2e	100	95.714	Rattus_norvegicus
ENSKMAG00000005954	polr2eb	100	70.616	ENSRBIG00000027259	-	100	70.616	Rhinopithecus_bieti
ENSKMAG00000005954	polr2eb	100	95.714	ENSRBIG00000028726	-	100	95.714	Rhinopithecus_bieti
ENSKMAG00000005954	polr2eb	100	95.714	ENSRROG00000043763	POLR2E	100	95.714	Rhinopithecus_roxellana
ENSKMAG00000005954	polr2eb	99	44.954	YBR154C	RPB5	98	44.954	Saccharomyces_cerevisiae
ENSKMAG00000005954	polr2eb	100	95.714	ENSSBOG00000027241	POLR2E	100	95.714	Saimiri_boliviensis_boliviensis
ENSKMAG00000005954	polr2eb	100	96.190	ENSSHAG00000010690	POLR2E	100	96.190	Sarcophilus_harrisii
ENSKMAG00000005954	polr2eb	100	100.000	ENSSFOG00015006073	polr2e	100	100.000	Scleropages_formosus
ENSKMAG00000005954	polr2eb	100	100.000	ENSSMAG00000012782	polr2eb	100	100.000	Scophthalmus_maximus
ENSKMAG00000005954	polr2eb	100	100.000	ENSSDUG00000003352	polr2eb	100	100.000	Seriola_dumerili
ENSKMAG00000005954	polr2eb	100	100.000	ENSSLDG00000004965	polr2eb	100	100.000	Seriola_lalandi_dorsalis
ENSKMAG00000005954	polr2eb	100	96.190	ENSSPUG00000006114	POLR2E	100	96.190	Sphenodon_punctatus
ENSKMAG00000005954	polr2eb	100	100.000	ENSSPAG00000017556	polr2eb	100	100.000	Stegastes_partitus
ENSKMAG00000005954	polr2eb	100	95.714	ENSSSCG00000021472	POLR2E	100	95.714	Sus_scrofa
ENSKMAG00000005954	polr2eb	66	87.857	ENSTGUG00000000922	POLR2E	99	87.857	Taeniopygia_guttata
ENSKMAG00000005954	polr2eb	96	95.522	ENSTRUG00000018238	polr2eb	100	87.143	Takifugu_rubripes
ENSKMAG00000005954	polr2eb	100	100.000	ENSTNIG00000013187	polr2eb	100	100.000	Tetraodon_nigroviridis
ENSKMAG00000005954	polr2eb	100	95.238	ENSTTRG00000001484	POLR2E	100	95.238	Tursiops_truncatus
ENSKMAG00000005954	polr2eb	92	92.268	ENSUAMG00000009166	POLR2E	100	82.381	Ursus_americanus
ENSKMAG00000005954	polr2eb	100	95.714	ENSVVUG00000022818	POLR2E	54	95.714	Vulpes_vulpes
ENSKMAG00000005954	polr2eb	100	97.143	ENSXETG00000003291	polr2e	100	97.143	Xenopus_tropicalis
ENSKMAG00000005954	polr2eb	100	86.667	ENSXCOG00000009197	polr2eb	100	86.667	Xiphophorus_couchianus
ENSKMAG00000005954	polr2eb	100	99.524	ENSXMAG00000026495	polr2eb	100	99.524	Xiphophorus_maculatus