EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000005965 (Gene tree)
Gene ID: 108246847
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 6331 bases
Position: chrLWHD01000237.1:519838-526168
Accession: 108246847
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000007925	GN3L_Grn1	PF08701.11	4.3e-23	1	1
ENSKMAP00000007925	MMR_HSR1	PF01926.23	5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008049	-	3061	XM_017434588	ENSKMAP00000007925	547 (aa)	XP_017290077	UPI0007F91733

Gene Model

Click here to download ENSKMAG00000005965's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000005965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000005965	gnl3	76	40.371	ENSKMAG00000020874	gnl3l	57	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000005965	gnl3	99	45.341	ENSG00000163938	GNL3	100	49.630	Homo_sapiens
ENSKMAG00000005965	gnl3	100	74.147	ENSAPOG00000004048	gnl3	100	75.224	Acanthochromis_polyacanthus
ENSKMAG00000005965	gnl3	99	43.750	ENSAMEG00000008456	GNL3	99	43.393	Ailuropoda_melanoleuca
ENSKMAG00000005965	gnl3	100	69.273	ENSACIG00000000545	gnl3	100	69.273	Amphilophus_citrinellus
ENSKMAG00000005965	gnl3	100	75.045	ENSAOCG00000012879	gnl3	100	75.045	Amphiprion_ocellaris
ENSKMAG00000005965	gnl3	100	75.045	ENSAPEG00000006146	gnl3	100	75.045	Amphiprion_percula
ENSKMAG00000005965	gnl3	100	70.547	ENSATEG00000024242	gnl3	100	72.352	Anabas_testudineus
ENSKMAG00000005965	gnl3	96	44.917	ENSAPLG00000005171	GNL3	99	45.656	Anas_platyrhynchos
ENSKMAG00000005965	gnl3	99	47.576	ENSACAG00000007357	GNL3	99	47.576	Anolis_carolinensis
ENSKMAG00000005965	gnl3	99	45.341	ENSANAG00000033209	GNL3	99	44.803	Aotus_nancymaae
ENSKMAG00000005965	gnl3	100	69.470	ENSACLG00000007381	gnl3	100	70.000	Astatotilapia_calliptera
ENSKMAG00000005965	gnl3	99	52.364	ENSAMXG00000020880	gnl3	99	53.097	Astyanax_mexicanus
ENSKMAG00000005965	gnl3	99	45.053	ENSBTAG00000014549	GNL3	99	45.826	Bos_taurus
ENSKMAG00000005965	gnl3	99	45.504	ENSCJAG00000044256	-	99	44.964	Callithrix_jacchus
ENSKMAG00000005965	gnl3	99	45.504	ENSCJAG00000006864	-	99	44.964	Callithrix_jacchus
ENSKMAG00000005965	gnl3	99	43.929	ENSCAFG00000009004	GNL3	99	44.643	Canis_familiaris
ENSKMAG00000005965	gnl3	89	46.869	ENSCAFG00020002613	GNL3	93	46.371	Canis_lupus_dingo
ENSKMAG00000005965	gnl3	99	44.599	ENSCHIG00000022181	GNL3	99	46.277	Capra_hircus
ENSKMAG00000005965	gnl3	99	44.086	ENSTSYG00000006851	GNL3	99	45.438	Carlito_syrichta
ENSKMAG00000005965	gnl3	99	42.518	ENSCPOG00000000282	GNL3	99	42.518	Cavia_porcellus
ENSKMAG00000005965	gnl3	99	44.964	ENSCCAG00000033281	GNL3	99	44.424	Cebus_capucinus
ENSKMAG00000005965	gnl3	99	45.648	ENSCATG00000040886	GNL3	99	45.471	Cercocebus_atys
ENSKMAG00000005965	gnl3	99	43.116	ENSCLAG00000010109	-	99	43.116	Chinchilla_lanigera
ENSKMAG00000005965	gnl3	99	45.161	ENSCSAG00000013315	GNL3	99	44.982	Chlorocebus_sabaeus
ENSKMAG00000005965	gnl3	99	40.767	ENSCHOG00000002726	GNL3	99	40.388	Choloepus_hoffmanni
ENSKMAG00000005965	gnl3	77	46.330	ENSCPBG00000018330	-	96	47.140	Chrysemys_picta_bellii
ENSKMAG00000005965	gnl3	98	44.465	ENSCANG00000039969	GNL3	99	44.139	Colobus_angolensis_palliatus
ENSKMAG00000005965	gnl3	99	44.920	ENSCGRG00001020950	Gnl3	99	45.027	Cricetulus_griseus_chok1gshd
ENSKMAG00000005965	gnl3	99	44.920	ENSCGRG00000015225	Gnl3	99	45.027	Cricetulus_griseus_crigri
ENSKMAG00000005965	gnl3	99	64.209	ENSCSEG00000005009	gnl3	100	64.209	Cynoglossus_semilaevis
ENSKMAG00000005965	gnl3	100	74.007	ENSCVAG00000010679	gnl3	100	74.007	Cyprinodon_variegatus
ENSKMAG00000005965	gnl3	99	53.464	ENSDARG00000006219	gnl3	99	55.062	Danio_rerio
ENSKMAG00000005965	gnl3	99	43.238	ENSDNOG00000001037	GNL3	99	44.050	Dasypus_novemcinctus
ENSKMAG00000005965	gnl3	99	45.471	ENSDORG00000000674	Gnl3	99	45.471	Dipodomys_ordii
ENSKMAG00000005965	gnl3	99	39.531	ENSETEG00000016534	-	88	76.056	Echinops_telfairi
ENSKMAG00000005965	gnl3	99	44.909	ENSEASG00005014636	GNL3	99	44.909	Equus_asinus_asinus
ENSKMAG00000005965	gnl3	99	42.756	ENSECAG00000014850	GNL3	99	42.152	Equus_caballus
ENSKMAG00000005965	gnl3	99	43.728	ENSEEUG00000004427	GNL3	99	42.287	Erinaceus_europaeus
ENSKMAG00000005965	gnl3	100	61.471	ENSELUG00000008767	gnl3	100	60.351	Esox_lucius
ENSKMAG00000005965	gnl3	99	43.640	ENSFCAG00000015719	GNL3	99	43.739	Felis_catus
ENSKMAG00000005965	gnl3	99	47.016	ENSFALG00000008957	GNL3	99	47.662	Ficedula_albicollis
ENSKMAG00000005965	gnl3	99	43.470	ENSFDAG00000020679	GNL3	99	43.557	Fukomys_damarensis
ENSKMAG00000005965	gnl3	100	72.645	ENSFHEG00000020897	gnl3	100	72.760	Fundulus_heteroclitus
ENSKMAG00000005965	gnl3	99	58.855	ENSGMOG00000001745	gnl3	100	57.424	Gadus_morhua
ENSKMAG00000005965	gnl3	99	44.367	ENSGALG00000001613	GNL3	99	46.447	Gallus_gallus
ENSKMAG00000005965	gnl3	99	61.538	ENSGAFG00000007184	gnl3	99	61.651	Gambusia_affinis
ENSKMAG00000005965	gnl3	99	65.364	ENSGACG00000000309	gnl3	99	66.903	Gasterosteus_aculeatus
ENSKMAG00000005965	gnl3	79	46.563	ENSGAGG00000021579	-	99	46.813	Gopherus_agassizii
ENSKMAG00000005965	gnl3	99	45.161	ENSGGOG00000011444	GNL3	99	44.624	Gorilla_gorilla
ENSKMAG00000005965	gnl3	100	71.892	ENSHBUG00000001340	gnl3	100	72.613	Haplochromis_burtoni
ENSKMAG00000005965	gnl3	99	42.655	ENSHGLG00000018299	GNL3	99	42.549	Heterocephalus_glaber_female
ENSKMAG00000005965	gnl3	99	60.971	ENSHCOG00000009446	gnl3	99	61.162	Hippocampus_comes
ENSKMAG00000005965	gnl3	86	53.390	ENSIPUG00000023677	gnl3	99	49.270	Ictalurus_punctatus
ENSKMAG00000005965	gnl3	99	43.728	ENSSTOG00000000356	GNL3	99	43.363	Ictidomys_tridecemlineatus
ENSKMAG00000005965	gnl3	99	45.208	ENSJJAG00000021993	Gnl3	100	45.208	Jaculus_jaculus
ENSKMAG00000005965	gnl3	100	71.119	ENSLBEG00000011394	gnl3	100	71.119	Labrus_bergylta
ENSKMAG00000005965	gnl3	99	48.421	ENSLACG00000001259	GNL3	99	49.123	Latimeria_chalumnae
ENSKMAG00000005965	gnl3	99	51.943	ENSLOCG00000010542	gnl3	99	53.108	Lepisosteus_oculatus
ENSKMAG00000005965	gnl3	99	40.885	ENSLAFG00000016056	GNL3	99	41.062	Loxodonta_africana
ENSKMAG00000005965	gnl3	99	45.341	ENSMFAG00000000613	GNL3	99	45.520	Macaca_fascicularis
ENSKMAG00000005965	gnl3	98	44.139	ENSMMUG00000012511	GNL3	99	44.322	Macaca_mulatta
ENSKMAG00000005965	gnl3	98	44.322	ENSMNEG00000041979	GNL3	99	44.505	Macaca_nemestrina
ENSKMAG00000005965	gnl3	99	46.004	ENSMLEG00000027696	GNL3	99	45.826	Mandrillus_leucophaeus
ENSKMAG00000005965	gnl3	100	73.333	ENSMAMG00000008904	gnl3	100	73.333	Mastacembelus_armatus
ENSKMAG00000005965	gnl3	86	67.585	ENSMZEG00005014957	-	96	67.006	Maylandia_zebra
ENSKMAG00000005965	gnl3	100	72.072	ENSMZEG00005014857	gnl3	100	72.793	Maylandia_zebra
ENSKMAG00000005965	gnl3	99	38.007	ENSMGAG00000000848	GNL3	99	39.696	Meleagris_gallopavo
ENSKMAG00000005965	gnl3	99	43.649	ENSMAUG00000020178	Gnl3	99	43.400	Mesocricetus_auratus
ENSKMAG00000005965	gnl3	99	42.179	ENSMICG00000016373	GNL3	99	41.652	Microcebus_murinus
ENSKMAG00000005965	gnl3	99	42.576	ENSMOCG00000018437	Gnl3	99	42.703	Microtus_ochrogaster
ENSKMAG00000005965	gnl3	99	67.395	ENSMMOG00000002815	gnl3	99	67.395	Mola_mola
ENSKMAG00000005965	gnl3	99	47.509	ENSMODG00000011257	GNL3	99	46.679	Monodelphis_domestica
ENSKMAG00000005965	gnl3	96	67.355	ENSMALG00000021043	gnl3	95	74.051	Monopterus_albus
ENSKMAG00000005965	gnl3	99	43.517	MGP_CAROLIEiJ_G0019063	Gnl3	99	43.423	Mus_caroli
ENSKMAG00000005965	gnl3	99	42.806	ENSMUSG00000042354	Gnl3	100	51.701	Mus_musculus
ENSKMAG00000005965	gnl3	99	43.694	MGP_PahariEiJ_G0030080	Gnl3	99	43.243	Mus_pahari
ENSKMAG00000005965	gnl3	99	43.872	MGP_SPRETEiJ_G0019948	Gnl3	99	43.243	Mus_spretus
ENSKMAG00000005965	gnl3	99	42.934	ENSMPUG00000016777	GNL3	99	43.036	Mustela_putorius_furo
ENSKMAG00000005965	gnl3	99	44.883	ENSMLUG00000000728	GNL3	99	44.604	Myotis_lucifugus
ENSKMAG00000005965	gnl3	99	42.294	ENSNGAG00000017202	Gnl3	99	42.370	Nannospalax_galili
ENSKMAG00000005965	gnl3	86	68.776	ENSNBRG00000013161	gnl3	99	67.951	Neolamprologus_brichardi
ENSKMAG00000005965	gnl3	99	45.324	ENSNLEG00000007173	GNL3	99	44.784	Nomascus_leucogenys
ENSKMAG00000005965	gnl3	62	44.970	ENSMEUG00000011502	-	87	41.827	Notamacropus_eugenii
ENSKMAG00000005965	gnl3	78	41.458	ENSOPRG00000009356	GNL3	96	41.458	Ochotona_princeps
ENSKMAG00000005965	gnl3	99	43.806	ENSODEG00000009492	GNL3	99	43.627	Octodon_degus
ENSKMAG00000005965	gnl3	100	72.662	ENSONIG00000019335	gnl3	100	72.662	Oreochromis_niloticus
ENSKMAG00000005965	gnl3	99	45.471	ENSOANG00000013437	GNL3	99	46.223	Ornithorhynchus_anatinus
ENSKMAG00000005965	gnl3	99	44.883	ENSOCUG00000009841	GNL3	99	44.186	Oryctolagus_cuniculus
ENSKMAG00000005965	gnl3	100	69.455	ENSORLG00000016030	gnl3	100	68.670	Oryzias_latipes
ENSKMAG00000005965	gnl3	100	69.636	ENSORLG00020014358	gnl3	100	68.852	Oryzias_latipes_hni
ENSKMAG00000005965	gnl3	100	69.636	ENSORLG00015009489	gnl3	100	68.852	Oryzias_latipes_hsok
ENSKMAG00000005965	gnl3	100	69.161	ENSOMEG00000005462	gnl3	100	68.739	Oryzias_melastigma
ENSKMAG00000005965	gnl3	99	44.014	ENSOGAG00000004101	GNL3	99	43.640	Otolemur_garnettii
ENSKMAG00000005965	gnl3	99	44.194	ENSOARG00000002470	GNL3	99	44.618	Ovis_aries
ENSKMAG00000005965	gnl3	99	45.520	ENSPPAG00000019253	GNL3	99	44.982	Pan_paniscus
ENSKMAG00000005965	gnl3	99	43.060	ENSPPRG00000009550	GNL3	99	43.162	Panthera_pardus
ENSKMAG00000005965	gnl3	99	42.883	ENSPTIG00000009356	GNL3	99	42.984	Panthera_tigris_altaica
ENSKMAG00000005965	gnl3	99	45.520	ENSPTRG00000015009	GNL3	99	44.982	Pan_troglodytes
ENSKMAG00000005965	gnl3	99	43.728	ENSPANG00000016579	GNL3	99	43.907	Papio_anubis
ENSKMAG00000005965	gnl3	100	57.838	ENSPKIG00000024295	gnl3	100	57.838	Paramormyrops_kingsleyae
ENSKMAG00000005965	gnl3	98	49.009	ENSPSIG00000011486	GNL3	99	48.556	Pelodiscus_sinensis
ENSKMAG00000005965	gnl3	99	62.044	ENSPMGG00000008210	gnl3	99	62.795	Periophthalmus_magnuspinnatus
ENSKMAG00000005965	gnl3	99	43.165	ENSPEMG00000017577	Gnl3	99	42.806	Peromyscus_maniculatus_bairdii
ENSKMAG00000005965	gnl3	86	50.210	ENSPCIG00000018642	GNL3	98	44.583	Phascolarctos_cinereus
ENSKMAG00000005965	gnl3	100	71.403	ENSPFOG00000017601	gnl3	96	75.483	Poecilia_formosa
ENSKMAG00000005965	gnl3	100	75.271	ENSPLAG00000016968	gnl3	100	75.271	Poecilia_latipinna
ENSKMAG00000005965	gnl3	99	71.193	ENSPMEG00000018775	gnl3	99	71.193	Poecilia_mexicana
ENSKMAG00000005965	gnl3	99	71.193	ENSPREG00000002909	gnl3	99	71.193	Poecilia_reticulata
ENSKMAG00000005965	gnl3	99	43.463	ENSPPYG00000013800	GNL3	99	43.463	Pongo_abelii
ENSKMAG00000005965	gnl3	81	45.011	ENSPCAG00000002006	GNL3	81	44.989	Procavia_capensis
ENSKMAG00000005965	gnl3	99	43.339	ENSPCOG00000026637	GNL3	99	43.872	Propithecus_coquereli
ENSKMAG00000005965	gnl3	99	43.894	ENSPVAG00000012586	GNL3	99	43.772	Pteropus_vampyrus
ENSKMAG00000005965	gnl3	93	63.462	ENSPNYG00000005130	gnl3	99	63.269	Pundamilia_nyererei
ENSKMAG00000005965	gnl3	99	52.297	ENSPNAG00000013096	gnl3	99	52.827	Pygocentrus_nattereri
ENSKMAG00000005965	gnl3	99	42.705	ENSRNOG00000028461	Gnl3	99	43.141	Rattus_norvegicus
ENSKMAG00000005965	gnl3	99	44.982	ENSRBIG00000031778	GNL3	99	45.161	Rhinopithecus_bieti
ENSKMAG00000005965	gnl3	99	44.982	ENSRROG00000030086	GNL3	99	45.161	Rhinopithecus_roxellana
ENSKMAG00000005965	gnl3	99	45.213	ENSSBOG00000019990	GNL3	99	44.723	Saimiri_boliviensis_boliviensis
ENSKMAG00000005965	gnl3	85	49.142	ENSSHAG00000006141	GNL3	99	45.683	Sarcophilus_harrisii
ENSKMAG00000005965	gnl3	100	58.951	ENSSFOG00015021228	gnl3	100	57.685	Scleropages_formosus
ENSKMAG00000005965	gnl3	100	70.290	ENSSMAG00000006662	gnl3	100	70.290	Scophthalmus_maximus
ENSKMAG00000005965	gnl3	100	73.514	ENSSDUG00000000972	gnl3	100	73.514	Seriola_dumerili
ENSKMAG00000005965	gnl3	100	74.054	ENSSLDG00000008692	gnl3	92	74.054	Seriola_lalandi_dorsalis
ENSKMAG00000005965	gnl3	89	45.233	ENSSARG00000002226	GNL3	92	44.664	Sorex_araneus
ENSKMAG00000005965	gnl3	99	48.174	ENSSPUG00000003582	GNL3	99	47.986	Sphenodon_punctatus
ENSKMAG00000005965	gnl3	100	75.000	ENSSPAG00000020180	gnl3	100	75.000	Stegastes_partitus
ENSKMAG00000005965	gnl3	99	42.527	ENSSSCG00000011449	GNL3	99	42.883	Sus_scrofa
ENSKMAG00000005965	gnl3	99	46.195	ENSTGUG00000005774	GNL3	99	47.257	Taeniopygia_guttata
ENSKMAG00000005965	gnl3	100	62.230	ENSTRUG00000005552	gnl3	100	61.331	Takifugu_rubripes
ENSKMAG00000005965	gnl3	100	61.733	ENSTNIG00000007263	gnl3	100	61.733	Tetraodon_nigroviridis
ENSKMAG00000005965	gnl3	97	40.575	ENSTBEG00000017518	GNL3	99	41.606	Tupaia_belangeri
ENSKMAG00000005965	gnl3	59	36.446	ENSTTRG00000008574	-	93	37.615	Tursiops_truncatus
ENSKMAG00000005965	gnl3	99	44.545	ENSUAMG00000012347	GNL3	99	44.182	Ursus_americanus
ENSKMAG00000005965	gnl3	99	44.286	ENSUMAG00000021001	GNL3	99	43.929	Ursus_maritimus
ENSKMAG00000005965	gnl3	99	43.784	ENSVVUG00000024536	-	99	43.243	Vulpes_vulpes
ENSKMAG00000005965	gnl3	99	59.484	ENSXCOG00000018425	gnl3	95	75.839	Xiphophorus_couchianus
ENSKMAG00000005965	gnl3	100	74.368	ENSXMAG00000022565	gnl3	100	74.368	Xiphophorus_maculatus