EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000006039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 3788 bases
Position: chrLWHD01000611.1:80143-83930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008060	RVT_1	PF00078.27	2.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008185	-	3788	-	ENSKMAP00000008060	975 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000006039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000006039	-	55	90.943	ENSKMAG00000017599	-	61	90.943
ENSKMAG00000006039	-	52	30.268	ENSKMAG00000006893	-	52	30.268
ENSKMAG00000006039	-	50	86.708	ENSKMAG00000007124	-	100	86.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006039	-	56	30.906	ENSAPEG00000019256	-	56	30.906	Amphiprion_percula
ENSKMAG00000006039	-	93	40.412	ENSACLG00000015496	-	100	40.412	Astatotilapia_calliptera
ENSKMAG00000006039	-	52	31.274	ENSACLG00000003130	-	57	31.274	Astatotilapia_calliptera
ENSKMAG00000006039	-	55	30.275	ENSACLG00000012223	-	52	30.258	Astatotilapia_calliptera
ENSKMAG00000006039	-	53	30.326	ENSLOCG00000000437	-	59	30.845	Lepisosteus_oculatus
ENSKMAG00000006039	-	53	32.276	ENSONIG00000021275	-	67	32.115	Oreochromis_niloticus
ENSKMAG00000006039	-	51	30.648	ENSORLG00000027405	-	55	30.648	Oryzias_latipes
ENSKMAG00000006039	-	94	40.538	ENSORLG00000023632	-	99	40.538	Oryzias_latipes
ENSKMAG00000006039	-	52	32.246	ENSORLG00000026511	-	51	32.246	Oryzias_latipes
ENSKMAG00000006039	-	57	31.414	ENSORLG00000024714	-	60	31.818	Oryzias_latipes
ENSKMAG00000006039	-	98	40.515	ENSORLG00000027187	-	81	40.909	Oryzias_latipes
ENSKMAG00000006039	-	56	30.838	ENSOMEG00000010354	-	55	30.841	Oryzias_melastigma
ENSKMAG00000006039	-	78	37.273	ENSTNIG00000001636	-	99	37.273	Tetraodon_nigroviridis
ENSKMAG00000006039	-	57	32.692	ENSXETG00000032308	-	65	32.692	Xenopus_tropicalis