EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000006149 (Gene tree)
Gene ID: 108249770
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 29342 bases
Position: chrLWHD01000494.1:11598-40939
Accession: 108249770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008356	Not1	PF04054.15	1.6e-152	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008483	-	7146	XM_017439350	ENSKMAP00000008356	2381 (aa)	XP_017294839	-

Gene Model

Click here to download ENSKMAG00000006149's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006149	cnot1	100	90.323	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSKMAG00000006149	cnot1	100	93.997	ENSAPOG00000005042	cnot1	100	93.997	Acanthochromis_polyacanthus
ENSKMAG00000006149	cnot1	100	90.364	ENSAMEG00000017298	CNOT1	100	90.528	Ailuropoda_melanoleuca
ENSKMAG00000006149	cnot1	90	95.482	ENSACIG00000016003	cnot1	100	95.482	Amphilophus_citrinellus
ENSKMAG00000006149	cnot1	100	95.718	ENSAPEG00000022342	cnot1	100	95.718	Amphiprion_percula
ENSKMAG00000006149	cnot1	100	93.118	ENSATEG00000012892	cnot1	100	93.705	Anabas_testudineus
ENSKMAG00000006149	cnot1	100	89.599	ENSAPLG00000007162	CNOT1	100	89.808	Anas_platyrhynchos
ENSKMAG00000006149	cnot1	91	88.889	ENSACAG00000001602	CNOT1	98	88.904	Anolis_carolinensis
ENSKMAG00000006149	cnot1	100	87.308	ENSANAG00000038198	CNOT1	100	87.552	Aotus_nancymaae
ENSKMAG00000006149	cnot1	100	94.335	ENSACLG00000014234	cnot1	100	94.083	Astatotilapia_calliptera
ENSKMAG00000006149	cnot1	100	93.535	ENSAMXG00000013170	cnot1	100	93.829	Astyanax_mexicanus
ENSKMAG00000006149	cnot1	95	96.208	ENSBTAG00000020782	CNOT1	100	96.208	Bos_taurus
ENSKMAG00000006149	cnot1	78	41.263	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSKMAG00000006149	cnot1	100	90.008	ENSCJAG00000011318	CNOT1	100	92.364	Callithrix_jacchus
ENSKMAG00000006149	cnot1	100	89.821	ENSCAFG00000008426	CNOT1	100	90.067	Canis_familiaris
ENSKMAG00000006149	cnot1	100	89.171	ENSCAFG00020010156	CNOT1	100	93.042	Canis_lupus_dingo
ENSKMAG00000006149	cnot1	100	90.176	ENSCHIG00000010452	CNOT1	100	90.339	Capra_hircus
ENSKMAG00000006149	cnot1	100	90.134	ENSTSYG00000006888	CNOT1	100	90.297	Carlito_syrichta
ENSKMAG00000006149	cnot1	100	86.288	ENSCPOG00000013026	CNOT1	100	86.407	Cavia_porcellus
ENSKMAG00000006149	cnot1	100	88.503	ENSCCAG00000026333	CNOT1	100	88.666	Cebus_capucinus
ENSKMAG00000006149	cnot1	100	90.092	ENSCATG00000032625	CNOT1	100	90.255	Cercocebus_atys
ENSKMAG00000006149	cnot1	100	90.134	ENSCLAG00000006289	CNOT1	100	90.255	Chinchilla_lanigera
ENSKMAG00000006149	cnot1	100	90.092	ENSCSAG00000004731	CNOT1	100	90.255	Chlorocebus_sabaeus
ENSKMAG00000006149	cnot1	80	97.527	ENSCHOG00000009712	CNOT1	83	97.527	Choloepus_hoffmanni
ENSKMAG00000006149	cnot1	93	95.644	ENSCPBG00000026222	CNOT1	98	95.644	Chrysemys_picta_bellii
ENSKMAG00000006149	cnot1	100	58.454	ENSCING00000009149	-	100	58.454	Ciona_intestinalis
ENSKMAG00000006149	cnot1	89	62.552	ENSCSAVG00000002414	-	95	79.470	Ciona_savignyi
ENSKMAG00000006149	cnot1	100	88.294	ENSCANG00000040534	CNOT1	100	88.455	Colobus_angolensis_palliatus
ENSKMAG00000006149	cnot1	100	89.883	ENSCGRG00001016365	Cnot1	100	89.958	Cricetulus_griseus_chok1gshd
ENSKMAG00000006149	cnot1	100	89.883	ENSCGRG00000001714	Cnot1	100	89.958	Cricetulus_griseus_crigri
ENSKMAG00000006149	cnot1	97	99.439	ENSCVAG00000018930	cnot1	100	99.439	Cyprinodon_variegatus
ENSKMAG00000006149	cnot1	100	93.414	ENSDARG00000004174	cnot1	100	93.289	Danio_rerio
ENSKMAG00000006149	cnot1	100	88.080	ENSDNOG00000013250	CNOT1	100	88.122	Dasypus_novemcinctus
ENSKMAG00000006149	cnot1	99	45.838	FBgn0085436	Not1	99	48.070	Drosophila_melanogaster
ENSKMAG00000006149	cnot1	84	94.428	ENSETEG00000012806	CNOT1	84	94.428	Echinops_telfairi
ENSKMAG00000006149	cnot1	81	76.042	ENSEBUG00000011534	cnot1	95	76.042	Eptatretus_burgeri
ENSKMAG00000006149	cnot1	95	95.825	ENSEASG00005005819	CNOT1	100	96.208	Equus_asinus_asinus
ENSKMAG00000006149	cnot1	100	90.092	ENSECAG00000009889	CNOT1	100	90.255	Equus_caballus
ENSKMAG00000006149	cnot1	89	89.202	ENSEEUG00000006015	CNOT1	90	89.202	Erinaceus_europaeus
ENSKMAG00000006149	cnot1	100	93.750	ENSELUG00000014085	cnot1	100	93.667	Esox_lucius
ENSKMAG00000006149	cnot1	100	89.871	ENSFCAG00000025155	CNOT1	100	90.117	Felis_catus
ENSKMAG00000006149	cnot1	100	90.126	ENSFALG00000007285	CNOT1	100	90.042	Ficedula_albicollis
ENSKMAG00000006149	cnot1	100	90.092	ENSFDAG00000013399	CNOT1	100	90.213	Fukomys_damarensis
ENSKMAG00000006149	cnot1	100	95.936	ENSFHEG00000020574	cnot1	100	95.936	Fundulus_heteroclitus
ENSKMAG00000006149	cnot1	91	94.390	ENSGMOG00000012864	cnot1	100	94.251	Gadus_morhua
ENSKMAG00000006149	cnot1	100	89.916	ENSGALG00000002301	CNOT1	100	89.833	Gallus_gallus
ENSKMAG00000006149	cnot1	100	94.880	ENSGAFG00000015005	cnot1	100	94.880	Gambusia_affinis
ENSKMAG00000006149	cnot1	91	96.154	ENSGACG00000002606	cnot1	100	98.667	Gasterosteus_aculeatus
ENSKMAG00000006149	cnot1	100	90.167	ENSGAGG00000022646	CNOT1	100	91.512	Gopherus_agassizii
ENSKMAG00000006149	cnot1	100	90.134	ENSGGOG00000009547	CNOT1	100	90.297	Gorilla_gorilla
ENSKMAG00000006149	cnot1	100	94.419	ENSHBUG00000001729	cnot1	100	94.167	Haplochromis_burtoni
ENSKMAG00000006149	cnot1	100	90.008	ENSHGLG00000014322	CNOT1	100	90.171	Heterocephalus_glaber_female
ENSKMAG00000006149	cnot1	100	94.931	ENSHCOG00000006501	cnot1	100	94.847	Hippocampus_comes
ENSKMAG00000006149	cnot1	100	91.921	ENSIPUG00000011915	cnot1	100	91.921	Ictalurus_punctatus
ENSKMAG00000006149	cnot1	100	90.050	ENSSTOG00000005490	CNOT1	100	89.942	Ictidomys_tridecemlineatus
ENSKMAG00000006149	cnot1	100	89.507	ENSJJAG00000000633	Cnot1	100	89.628	Jaculus_jaculus
ENSKMAG00000006149	cnot1	95	98.403	ENSLBEG00000004740	cnot1	100	98.403	Labrus_bergylta
ENSKMAG00000006149	cnot1	100	90.502	ENSLACG00000010869	CNOT1	100	90.377	Latimeria_chalumnae
ENSKMAG00000006149	cnot1	100	94.044	ENSLOCG00000006324	cnot1	100	94.044	Lepisosteus_oculatus
ENSKMAG00000006149	cnot1	100	89.975	ENSLAFG00000000098	CNOT1	100	90.221	Loxodonta_africana
ENSKMAG00000006149	cnot1	100	90.323	ENSMFAG00000035888	CNOT1	100	90.486	Macaca_fascicularis
ENSKMAG00000006149	cnot1	100	90.050	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSKMAG00000006149	cnot1	100	87.620	ENSMNEG00000031820	CNOT1	100	89.981	Macaca_nemestrina
ENSKMAG00000006149	cnot1	100	88.712	ENSMLEG00000040933	CNOT1	100	88.949	Mandrillus_leucophaeus
ENSKMAG00000006149	cnot1	100	93.745	ENSMAMG00000016524	cnot1	100	93.745	Mastacembelus_armatus
ENSKMAG00000006149	cnot1	100	90.113	ENSMZEG00005016210	cnot1	100	90.448	Maylandia_zebra
ENSKMAG00000006149	cnot1	100	90.189	ENSMGAG00000001908	CNOT1	100	90.105	Meleagris_gallopavo
ENSKMAG00000006149	cnot1	100	90.323	ENSMICG00000007071	CNOT1	100	90.452	Microcebus_murinus
ENSKMAG00000006149	cnot1	100	89.883	ENSMOCG00000017969	Cnot1	100	90.004	Microtus_ochrogaster
ENSKMAG00000006149	cnot1	100	91.772	ENSMMOG00000019134	cnot1	100	92.359	Mola_mola
ENSKMAG00000006149	cnot1	100	89.887	ENSMODG00000014199	CNOT1	100	90.134	Monodelphis_domestica
ENSKMAG00000006149	cnot1	100	94.416	ENSMALG00000008645	cnot1	100	94.416	Monopterus_albus
ENSKMAG00000006149	cnot1	95	95.238	MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	Mus_caroli
ENSKMAG00000006149	cnot1	100	90.071	ENSMUSG00000036550	Cnot1	100	90.193	Mus_musculus
ENSKMAG00000006149	cnot1	100	89.925	MGP_PahariEiJ_G0023028	Cnot1	100	90.046	Mus_pahari
ENSKMAG00000006149	cnot1	100	89.925	MGP_SPRETEiJ_G0032549	Cnot1	100	90.046	Mus_spretus
ENSKMAG00000006149	cnot1	100	90.134	ENSMPUG00000004830	CNOT1	100	90.297	Mustela_putorius_furo
ENSKMAG00000006149	cnot1	100	89.883	ENSMLUG00000003728	CNOT1	100	90.046	Myotis_lucifugus
ENSKMAG00000006149	cnot1	100	89.967	ENSNGAG00000018628	Cnot1	100	90.088	Nannospalax_galili
ENSKMAG00000006149	cnot1	97	87.740	ENSNBRG00000019358	cnot1	100	88.288	Neolamprologus_brichardi
ENSKMAG00000006149	cnot1	100	90.327	ENSNLEG00000003566	CNOT1	100	90.293	Nomascus_leucogenys
ENSKMAG00000006149	cnot1	86	91.275	ENSMEUG00000006145	CNOT1	88	91.275	Notamacropus_eugenii
ENSKMAG00000006149	cnot1	86	97.778	ENSOPRG00000005604	CNOT1	86	97.778	Ochotona_princeps
ENSKMAG00000006149	cnot1	100	90.050	ENSODEG00000016337	CNOT1	100	90.171	Octodon_degus
ENSKMAG00000006149	cnot1	100	96.097	ENSONIG00000007358	cnot1	100	96.097	Oreochromis_niloticus
ENSKMAG00000006149	cnot1	91	89.547	ENSOANG00000012109	CNOT1	100	89.916	Ornithorhynchus_anatinus
ENSKMAG00000006149	cnot1	100	90.134	ENSOCUG00000006911	CNOT1	100	90.335	Oryctolagus_cuniculus
ENSKMAG00000006149	cnot1	100	95.096	ENSORLG00000013734	cnot1	100	95.641	Oryzias_latipes
ENSKMAG00000006149	cnot1	100	93.367	ENSORLG00020017012	cnot1	100	93.913	Oryzias_latipes_hni
ENSKMAG00000006149	cnot1	100	93.325	ENSORLG00015007091	cnot1	100	93.871	Oryzias_latipes_hsok
ENSKMAG00000006149	cnot1	100	93.462	ENSOMEG00000015124	cnot1	100	93.462	Oryzias_melastigma
ENSKMAG00000006149	cnot1	100	90.335	ENSOGAG00000000543	CNOT1	100	90.293	Otolemur_garnettii
ENSKMAG00000006149	cnot1	100	90.176	ENSOARG00000001567	CNOT1	100	90.339	Ovis_aries
ENSKMAG00000006149	cnot1	100	90.092	ENSPPAG00000022013	CNOT1	100	90.255	Pan_paniscus
ENSKMAG00000006149	cnot1	100	90.134	ENSPPRG00000004867	CNOT1	100	90.297	Panthera_pardus
ENSKMAG00000006149	cnot1	100	90.134	ENSPTIG00000012589	CNOT1	100	90.297	Panthera_tigris_altaica
ENSKMAG00000006149	cnot1	100	89.829	ENSPTRG00000008183	CNOT1	100	90.075	Pan_troglodytes
ENSKMAG00000006149	cnot1	100	87.223	ENSPANG00000020901	CNOT1	100	87.385	Papio_anubis
ENSKMAG00000006149	cnot1	100	93.663	ENSPKIG00000023538	CNOT1	100	93.580	Paramormyrops_kingsleyae
ENSKMAG00000006149	cnot1	100	86.861	ENSPKIG00000002914	CNOT1	99	86.797	Paramormyrops_kingsleyae
ENSKMAG00000006149	cnot1	100	89.749	ENSPSIG00000005499	CNOT1	100	89.874	Pelodiscus_sinensis
ENSKMAG00000006149	cnot1	100	79.256	ENSPMAG00000009381	cnot1	100	79.256	Petromyzon_marinus
ENSKMAG00000006149	cnot1	95	96.407	ENSPCIG00000007343	CNOT1	100	96.407	Phascolarctos_cinereus
ENSKMAG00000006149	cnot1	99	96.232	ENSPFOG00000003497	cnot1	100	96.232	Poecilia_formosa
ENSKMAG00000006149	cnot1	95	98.204	ENSPLAG00000014018	cnot1	100	98.204	Poecilia_latipinna
ENSKMAG00000006149	cnot1	95	98.204	ENSPMEG00000005868	cnot1	100	98.204	Poecilia_mexicana
ENSKMAG00000006149	cnot1	95	98.204	ENSPREG00000018793	cnot1	100	98.204	Poecilia_reticulata
ENSKMAG00000006149	cnot1	100	90.134	ENSPPYG00000007410	CNOT1	100	90.297	Pongo_abelii
ENSKMAG00000006149	cnot1	87	89.362	ENSPCAG00000003241	CNOT1	88	89.362	Procavia_capensis
ENSKMAG00000006149	cnot1	100	90.017	ENSPCOG00000027139	CNOT1	100	90.230	Propithecus_coquereli
ENSKMAG00000006149	cnot1	100	87.333	ENSPVAG00000004243	CNOT1	100	87.829	Pteropus_vampyrus
ENSKMAG00000006149	cnot1	100	92.191	ENSPNYG00000012919	cnot1	100	92.527	Pundamilia_nyererei
ENSKMAG00000006149	cnot1	100	92.611	ENSPNAG00000000246	cnot1	100	92.695	Pygocentrus_nattereri
ENSKMAG00000006149	cnot1	100	89.883	ENSRNOG00000012271	Cnot1	100	90.004	Rattus_norvegicus
ENSKMAG00000006149	cnot1	100	87.953	ENSRBIG00000044598	CNOT1	100	88.115	Rhinopithecus_bieti
ENSKMAG00000006149	cnot1	100	90.092	ENSRROG00000000906	CNOT1	100	90.255	Rhinopithecus_roxellana
ENSKMAG00000006149	cnot1	56	30.846	YCR093W	CDC39	61	34.074	Saccharomyces_cerevisiae
ENSKMAG00000006149	cnot1	100	85.863	ENSSBOG00000029155	CNOT1	100	86.023	Saimiri_boliviensis_boliviensis
ENSKMAG00000006149	cnot1	100	90.092	ENSSHAG00000012187	CNOT1	100	90.213	Sarcophilus_harrisii
ENSKMAG00000006149	cnot1	100	91.552	ENSSFOG00015017614	cnot1	100	91.384	Scleropages_formosus
ENSKMAG00000006149	cnot1	100	95.686	ENSSMAG00000013844	cnot1	100	95.686	Scophthalmus_maximus
ENSKMAG00000006149	cnot1	100	92.950	ENSSDUG00000021491	cnot1	100	93.538	Seriola_dumerili
ENSKMAG00000006149	cnot1	100	96.696	ENSSLDG00000014816	cnot1	100	96.696	Seriola_lalandi_dorsalis
ENSKMAG00000006149	cnot1	84	97.600	ENSSARG00000000762	CNOT1	88	97.600	Sorex_araneus
ENSKMAG00000006149	cnot1	100	95.634	ENSSPAG00000018802	cnot1	100	95.634	Stegastes_partitus
ENSKMAG00000006149	cnot1	95	96.208	ENSSSCG00000002799	CNOT1	100	96.208	Sus_scrofa
ENSKMAG00000006149	cnot1	100	89.971	ENSTGUG00000005919	CNOT1	100	89.887	Taeniopygia_guttata
ENSKMAG00000006149	cnot1	100	93.693	ENSTNIG00000018706	cnot1	100	93.567	Tetraodon_nigroviridis
ENSKMAG00000006149	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	80	97.887	Tupaia_belangeri
ENSKMAG00000006149	cnot1	95	89.030	ENSTTRG00000008460	CNOT1	95	89.255	Tursiops_truncatus
ENSKMAG00000006149	cnot1	100	90.134	ENSUAMG00000009251	CNOT1	100	90.297	Ursus_americanus
ENSKMAG00000006149	cnot1	100	90.134	ENSUMAG00000021291	CNOT1	100	90.297	Ursus_maritimus
ENSKMAG00000006149	cnot1	97	92.091	ENSVPAG00000008846	CNOT1	97	92.091	Vicugna_pacos
ENSKMAG00000006149	cnot1	100	89.171	ENSVVUG00000024037	CNOT1	100	93.042	Vulpes_vulpes
ENSKMAG00000006149	cnot1	100	85.182	ENSXETG00000015900	cnot1	100	84.734	Xenopus_tropicalis
ENSKMAG00000006149	cnot1	100	94.964	ENSXCOG00000013552	cnot1	100	94.964	Xiphophorus_couchianus
ENSKMAG00000006149	cnot1	100	95.006	ENSXMAG00000006031	cnot1	100	95.006	Xiphophorus_maculatus