EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000006170 (Gene tree)
Gene ID: 108230746
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4349 bases
Position: chrLWHD01000009.1:6199021-6203369
Accession: 108230746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008185	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008312	-	2591	XM_017407219	ENSKMAP00000008185	218 (aa)	XP_017262708	UPI00022B0D84

Gene Model

Click here to download ENSKMAG00000006170's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000006170	-	99	81.567	ENSKMAG00000015516	rab11al	99	81.567
ENSKMAG00000006170	-	74	33.129	ENSKMAG00000017893	mras	82	34.659
ENSKMAG00000006170	-	66	40.667	ENSKMAG00000020034	-	51	40.667
ENSKMAG00000006170	-	75	47.239	ENSKMAG00000020038	rab5c	89	41.667
ENSKMAG00000006170	-	78	32.941	ENSKMAG00000003938	kras	93	34.066
ENSKMAG00000006170	-	87	47.917	ENSKMAG00000017357	rab1ab	95	47.917
ENSKMAG00000006170	-	79	33.140	ENSKMAG00000018270	rab23	80	32.984
ENSKMAG00000006170	-	78	40.462	ENSKMAG00000002862	zgc:101559	74	40.462
ENSKMAG00000006170	-	80	43.678	ENSKMAG00000003494	si:dkey-16l2.16	98	40.670
ENSKMAG00000006170	-	79	41.243	ENSKMAG00000019964	rab9b	86	41.243
ENSKMAG00000006170	-	82	32.432	ENSKMAG00000017150	-	83	32.432
ENSKMAG00000006170	-	73	32.500	ENSKMAG00000020448	rheb	86	32.500
ENSKMAG00000006170	-	77	52.695	ENSKMAG00000017487	rab14	78	52.695
ENSKMAG00000006170	-	77	52.096	ENSKMAG00000011301	-	78	52.096
ENSKMAG00000006170	-	68	35.333	ENSKMAG00000001922	Ha-ras	85	36.420
ENSKMAG00000006170	-	96	38.571	ENSKMAG00000004439	rab30	97	38.571
ENSKMAG00000006170	-	72	39.264	ENSKMAG00000020013	-	79	39.264
ENSKMAG00000006170	-	77	46.154	ENSKMAG00000012657	-	76	46.154
ENSKMAG00000006170	-	100	96.330	ENSKMAG00000006082	-	100	96.330
ENSKMAG00000006170	-	76	43.373	ENSKMAG00000020392	rab15	78	43.373
ENSKMAG00000006170	-	72	37.580	ENSKMAG00000002545	-	74	37.580
ENSKMAG00000006170	-	84	42.473	ENSKMAG00000007267	rab42a	85	42.473
ENSKMAG00000006170	-	89	32.000	ENSKMAG00000015507	rab6ba	92	32.000
ENSKMAG00000006170	-	93	34.314	ENSKMAG00000020733	rras	94	34.314
ENSKMAG00000006170	-	70	37.500	ENSKMAG00000013146	-	79	37.500
ENSKMAG00000006170	-	74	39.521	ENSKMAG00000003646	-	83	39.521
ENSKMAG00000006170	-	74	33.333	ENSKMAG00000003080	si:cabz01085950.1	82	33.333
ENSKMAG00000006170	-	100	97.706	ENSKMAG00000009033	rab11bb	100	97.706
ENSKMAG00000006170	-	94	41.176	ENSKMAG00000005111	rab5aa	89	41.176
ENSKMAG00000006170	-	76	49.398	ENSKMAG00000006854	rab35b	94	44.560
ENSKMAG00000006170	-	97	45.755	ENSKMAG00000014038	-	96	45.755
ENSKMAG00000006170	-	71	32.500	ENSKMAG00000021039	si:dkey-13a21.4	66	32.500
ENSKMAG00000006170	-	96	38.278	ENSKMAG00000018973	-	87	38.278
ENSKMAG00000006170	-	87	44.211	ENSKMAG00000001908	rab13	98	44.211
ENSKMAG00000006170	-	95	33.482	ENSKMAG00000012778	si:dkey-34d22.5	97	33.482
ENSKMAG00000006170	-	53	30.252	ENSKMAG00000011334	arl4cb	60	30.252
ENSKMAG00000006170	-	83	36.316	ENSKMAG00000003105	rab33ba	81	36.316
ENSKMAG00000006170	-	75	47.239	ENSKMAG00000017417	-	74	47.239
ENSKMAG00000006170	-	83	72.376	ENSKMAG00000015488	rab25b	87	72.376
ENSKMAG00000006170	-	78	54.386	ENSKMAG00000009799	rab2a	81	54.386
ENSKMAG00000006170	-	74	43.210	ENSKMAG00000001191	RAB15	77	43.210
ENSKMAG00000006170	-	72	35.669	ENSKMAG00000011278	rab6bb	77	35.948
ENSKMAG00000006170	-	77	37.059	ENSKMAG00000012723	rabl2	72	37.059
ENSKMAG00000006170	-	74	31.214	ENSKMAG00000017097	rasl11a	70	31.214
ENSKMAG00000006170	-	94	31.944	ENSKMAG00000019647	rab34a	77	31.944
ENSKMAG00000006170	-	75	43.030	ENSKMAG00000020056	rab12	85	37.799
ENSKMAG00000006170	-	75	45.122	ENSKMAG00000007364	rab18b	80	45.122
ENSKMAG00000006170	-	95	42.105	ENSKMAG00000008625	RAB39B	97	42.105
ENSKMAG00000006170	-	82	38.043	ENSKMAG00000006593	rab33a	85	38.043
ENSKMAG00000006170	-	93	31.163	ENSKMAG00000019341	rab34b	81	31.163
ENSKMAG00000006170	-	77	54.386	ENSKMAG00000020250	rab4a	80	54.386
ENSKMAG00000006170	-	99	63.303	ENSKMAG00000004945	rab25a	99	63.303
ENSKMAG00000006170	-	79	37.288	ENSKMAG00000017662	rab9a	86	37.288
ENSKMAG00000006170	-	74	43.478	ENSKMAG00000014705	rab22a	83	43.478
ENSKMAG00000006170	-	74	30.061	ENSKMAG00000019397	rhebl1	88	30.061
ENSKMAG00000006170	-	77	52.381	ENSKMAG00000009856	zgc:171927	79	52.381
ENSKMAG00000006170	-	100	86.239	ENSKMAG00000011905	rab11a	100	86.239
ENSKMAG00000006170	-	72	40.491	ENSKMAG00000006812	RAB7A	78	40.491
ENSKMAG00000006170	-	76	53.614	ENSKMAG00000006810	rab1ba	83	53.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006170	-	100	97.706	ENSAPOG00000023455	rab11bb	100	97.706	Acanthochromis_polyacanthus
ENSKMAG00000006170	-	100	100.000	ENSACIG00000024376	-	100	100.000	Amphilophus_citrinellus
ENSKMAG00000006170	-	100	85.780	ENSACIG00000019631	rab11bb	100	85.780	Amphilophus_citrinellus
ENSKMAG00000006170	-	100	97.706	ENSAOCG00000018239	rab11bb	100	97.706	Amphiprion_ocellaris
ENSKMAG00000006170	-	100	100.000	ENSAOCG00000018849	-	100	100.000	Amphiprion_ocellaris
ENSKMAG00000006170	-	100	97.706	ENSAPEG00000016590	rab11bb	100	97.706	Amphiprion_percula
ENSKMAG00000006170	-	100	97.706	ENSATEG00000017696	rab11bb	100	97.706	Anabas_testudineus
ENSKMAG00000006170	-	100	99.541	ENSATEG00000023725	-	100	99.541	Anabas_testudineus
ENSKMAG00000006170	-	94	98.544	ENSAPLG00000011046	-	94	98.544	Anas_platyrhynchos
ENSKMAG00000006170	-	100	100.000	ENSACLG00000005446	-	100	100.000	Astatotilapia_calliptera
ENSKMAG00000006170	-	100	97.706	ENSACLG00000007076	rab11bb	100	97.706	Astatotilapia_calliptera
ENSKMAG00000006170	-	100	99.083	ENSAMXG00000042655	rab11bb	100	99.083	Astyanax_mexicanus
ENSKMAG00000006170	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSKMAG00000006170	-	100	96.789	ENSBTAG00000002475	RAB11B	100	96.789	Bos_taurus
ENSKMAG00000006170	-	96	95.215	ENSCHIG00000022426	-	93	95.215	Capra_hircus
ENSKMAG00000006170	-	100	96.789	ENSCATG00000029188	-	100	96.789	Cercocebus_atys
ENSKMAG00000006170	-	100	97.706	ENSCPBG00000017056	-	100	97.706	Chrysemys_picta_bellii
ENSKMAG00000006170	-	100	99.541	ENSCSEG00000007239	-	100	99.541	Cynoglossus_semilaevis
ENSKMAG00000006170	-	100	97.706	ENSCSEG00000012149	rab11bb	100	97.706	Cynoglossus_semilaevis
ENSKMAG00000006170	-	100	95.872	ENSCVAG00000019751	-	100	95.872	Cyprinodon_variegatus
ENSKMAG00000006170	-	100	97.706	ENSCVAG00000017021	-	100	97.706	Cyprinodon_variegatus
ENSKMAG00000006170	-	100	99.083	ENSCVAG00000019718	-	100	99.083	Cyprinodon_variegatus
ENSKMAG00000006170	-	100	97.706	ENSDARG00000090086	rab11bb	100	97.706	Danio_rerio
ENSKMAG00000006170	-	99	94.470	ENSETEG00000000905	-	99	94.470	Echinops_telfairi
ENSKMAG00000006170	-	99	94.419	ENSEASG00005003708	-	99	94.419	Equus_asinus_asinus
ENSKMAG00000006170	-	99	94.419	ENSECAG00000000716	RAB11B	99	94.419	Equus_caballus
ENSKMAG00000006170	-	100	98.624	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSKMAG00000006170	-	100	97.706	ENSELUG00000000916	-	100	97.706	Esox_lucius
ENSKMAG00000006170	-	100	97.706	ENSELUG00000021148	rab11bb	100	97.706	Esox_lucius
ENSKMAG00000006170	-	100	97.706	ENSFALG00000011828	-	100	97.706	Ficedula_albicollis
ENSKMAG00000006170	-	100	99.541	ENSFHEG00000022676	-	100	99.541	Fundulus_heteroclitus
ENSKMAG00000006170	-	100	97.706	ENSFHEG00000018353	rab11bb	100	97.706	Fundulus_heteroclitus
ENSKMAG00000006170	-	100	97.706	ENSGMOG00000009211	rab11bb	100	97.706	Gadus_morhua
ENSKMAG00000006170	-	99	95.370	ENSGMOG00000009668	-	99	95.370	Gadus_morhua
ENSKMAG00000006170	-	100	97.706	ENSGALG00000000613	RAB11B	100	97.706	Gallus_gallus
ENSKMAG00000006170	-	100	97.706	ENSGAFG00000007102	rab11bb	100	97.706	Gambusia_affinis
ENSKMAG00000006170	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSKMAG00000006170	-	100	97.248	ENSGACG00000015479	rab11bb	100	97.248	Gasterosteus_aculeatus
ENSKMAG00000006170	-	100	96.789	ENSGGOG00000014516	RAB11B	100	96.789	Gorilla_gorilla
ENSKMAG00000006170	-	100	100.000	ENSHBUG00000009947	-	100	100.000	Haplochromis_burtoni
ENSKMAG00000006170	-	100	97.706	ENSHBUG00000014777	rab11bb	100	97.706	Haplochromis_burtoni
ENSKMAG00000006170	-	100	98.165	ENSHCOG00000002423	rab11bb	100	98.165	Hippocampus_comes
ENSKMAG00000006170	-	100	96.789	ENSHCOG00000000954	-	100	96.789	Hippocampus_comes
ENSKMAG00000006170	-	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSKMAG00000006170	-	100	96.789	ENSIPUG00000025100	rab11b	100	96.789	Ictalurus_punctatus
ENSKMAG00000006170	-	100	98.624	ENSIPUG00000019927	rab11bb	100	98.624	Ictalurus_punctatus
ENSKMAG00000006170	-	100	99.083	ENSLBEG00000004172	-	100	99.083	Labrus_bergylta
ENSKMAG00000006170	-	100	91.743	ENSLBEG00000005981	-	100	91.743	Labrus_bergylta
ENSKMAG00000006170	-	100	97.706	ENSLBEG00000015248	rab11bb	100	97.706	Labrus_bergylta
ENSKMAG00000006170	-	100	97.706	ENSLACG00000016857	-	100	97.706	Latimeria_chalumnae
ENSKMAG00000006170	-	100	96.789	ENSMFAG00000003654	RAB11B	100	96.789	Macaca_fascicularis
ENSKMAG00000006170	-	100	96.789	ENSMLEG00000030601	-	100	96.789	Mandrillus_leucophaeus
ENSKMAG00000006170	-	100	98.624	ENSMAMG00000018533	-	100	98.624	Mastacembelus_armatus
ENSKMAG00000006170	-	100	97.248	ENSMAMG00000006378	rab11bb	100	97.248	Mastacembelus_armatus
ENSKMAG00000006170	-	100	100.000	ENSMZEG00005010975	-	100	100.000	Maylandia_zebra
ENSKMAG00000006170	-	100	97.706	ENSMZEG00005003352	rab11bb	100	97.706	Maylandia_zebra
ENSKMAG00000006170	-	100	96.789	ENSMICG00000034065	-	100	96.789	Microcebus_murinus
ENSKMAG00000006170	-	94	97.561	ENSMMOG00000007917	rab11bb	100	97.561	Mola_mola
ENSKMAG00000006170	-	100	100.000	ENSMMOG00000001250	-	100	100.000	Mola_mola
ENSKMAG00000006170	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSKMAG00000006170	-	100	97.706	ENSMODG00000003841	-	100	97.706	Monodelphis_domestica
ENSKMAG00000006170	-	100	97.706	ENSMALG00000022187	rab11bb	100	97.706	Monopterus_albus
ENSKMAG00000006170	-	94	88.889	ENSMLUG00000006677	-	100	88.889	Myotis_lucifugus
ENSKMAG00000006170	-	100	100.000	ENSNBRG00000023885	-	100	100.000	Neolamprologus_brichardi
ENSKMAG00000006170	-	100	97.706	ENSNBRG00000000372	rab11bb	100	97.706	Neolamprologus_brichardi
ENSKMAG00000006170	-	100	97.706	ENSMEUG00000003686	-	100	97.706	Notamacropus_eugenii
ENSKMAG00000006170	-	100	97.706	ENSONIG00000010435	rab11bb	100	97.706	Oreochromis_niloticus
ENSKMAG00000006170	-	100	100.000	ENSONIG00000002544	-	100	100.000	Oreochromis_niloticus
ENSKMAG00000006170	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSKMAG00000006170	-	99	98.157	ENSORLG00000015284	-	72	98.157	Oryzias_latipes
ENSKMAG00000006170	-	100	97.248	ENSORLG00000013938	rab11bb	100	97.248	Oryzias_latipes
ENSKMAG00000006170	-	100	97.248	ENSORLG00020019393	rab11bb	100	97.248	Oryzias_latipes_hni
ENSKMAG00000006170	-	99	98.157	ENSORLG00020020844	RAB11B	99	98.157	Oryzias_latipes_hni
ENSKMAG00000006170	-	99	98.157	ENSORLG00015016999	RAB11B	99	98.157	Oryzias_latipes_hsok
ENSKMAG00000006170	-	100	97.248	ENSORLG00015020173	rab11bb	100	97.248	Oryzias_latipes_hsok
ENSKMAG00000006170	-	100	97.706	ENSOMEG00000017806	-	100	97.706	Oryzias_melastigma
ENSKMAG00000006170	-	100	99.083	ENSOMEG00000002562	-	100	99.083	Oryzias_melastigma
ENSKMAG00000006170	-	100	96.789	ENSPPAG00000028589	-	100	96.789	Pan_paniscus
ENSKMAG00000006170	-	100	96.789	ENSPTRG00000010422	RAB11B	100	96.789	Pan_troglodytes
ENSKMAG00000006170	-	100	96.789	ENSPANG00000007765	-	100	96.789	Papio_anubis
ENSKMAG00000006170	-	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSKMAG00000006170	-	100	97.248	ENSPKIG00000011703	-	100	97.248	Paramormyrops_kingsleyae
ENSKMAG00000006170	-	100	97.706	ENSPKIG00000011640	rab11bb	100	97.706	Paramormyrops_kingsleyae
ENSKMAG00000006170	-	98	93.607	ENSPSIG00000010242	-	85	93.607	Pelodiscus_sinensis
ENSKMAG00000006170	-	100	97.706	ENSPMGG00000009435	rab11bb	100	97.706	Periophthalmus_magnuspinnatus
ENSKMAG00000006170	-	100	98.165	ENSPMGG00000014333	-	100	98.165	Periophthalmus_magnuspinnatus
ENSKMAG00000006170	-	99	94.470	ENSPMGG00000014336	-	99	94.470	Periophthalmus_magnuspinnatus
ENSKMAG00000006170	-	97	97.170	ENSPCIG00000020371	-	99	97.170	Phascolarctos_cinereus
ENSKMAG00000006170	-	100	100.000	ENSPFOG00000006224	-	100	100.000	Poecilia_formosa
ENSKMAG00000006170	-	100	97.706	ENSPFOG00000024114	-	100	97.706	Poecilia_formosa
ENSKMAG00000006170	-	100	100.000	ENSPLAG00000014207	-	100	100.000	Poecilia_latipinna
ENSKMAG00000006170	-	100	97.706	ENSPLAG00000001598	rab11bb	100	97.706	Poecilia_latipinna
ENSKMAG00000006170	-	100	100.000	ENSPMEG00000007842	-	100	100.000	Poecilia_mexicana
ENSKMAG00000006170	-	100	97.706	ENSPMEG00000012389	rab11bb	100	97.706	Poecilia_mexicana
ENSKMAG00000006170	-	100	99.541	ENSPREG00000006336	-	100	99.541	Poecilia_reticulata
ENSKMAG00000006170	-	100	97.706	ENSPREG00000014269	rab11bb	100	97.706	Poecilia_reticulata
ENSKMAG00000006170	-	100	97.706	ENSPNYG00000004098	rab11bb	100	97.706	Pundamilia_nyererei
ENSKMAG00000006170	-	100	100.000	ENSPNYG00000019611	-	100	100.000	Pundamilia_nyererei
ENSKMAG00000006170	-	100	96.789	ENSRROG00000037812	-	100	96.789	Rhinopithecus_roxellana
ENSKMAG00000006170	-	97	96.698	ENSSHAG00000006816	-	97	96.698	Sarcophilus_harrisii
ENSKMAG00000006170	-	100	73.853	ENSSFOG00015006245	-	100	73.853	Scleropages_formosus
ENSKMAG00000006170	-	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSKMAG00000006170	-	100	96.330	ENSSMAG00000018613	-	100	96.330	Scophthalmus_maximus
ENSKMAG00000006170	-	100	97.248	ENSSMAG00000004922	rab11bb	100	97.248	Scophthalmus_maximus
ENSKMAG00000006170	-	100	100.000	ENSSDUG00000002934	-	100	100.000	Seriola_dumerili
ENSKMAG00000006170	-	100	97.706	ENSSDUG00000013558	rab11bb	100	97.706	Seriola_dumerili
ENSKMAG00000006170	-	100	100.000	ENSSLDG00000005275	-	100	100.000	Seriola_lalandi_dorsalis
ENSKMAG00000006170	-	100	97.706	ENSSLDG00000020676	rab11bb	100	97.706	Seriola_lalandi_dorsalis
ENSKMAG00000006170	-	100	97.706	ENSSPUG00000002243	-	100	97.706	Sphenodon_punctatus
ENSKMAG00000006170	-	100	100.000	ENSSPAG00000014559	-	100	100.000	Stegastes_partitus
ENSKMAG00000006170	-	100	97.706	ENSSPAG00000011419	rab11bb	100	97.706	Stegastes_partitus
ENSKMAG00000006170	-	100	97.706	ENSTGUG00000000084	-	100	97.706	Taeniopygia_guttata
ENSKMAG00000006170	-	99	95.853	ENSTRUG00000021614	-	99	95.853	Takifugu_rubripes
ENSKMAG00000006170	-	99	99.537	ENSTRUG00000021619	-	100	99.537	Takifugu_rubripes
ENSKMAG00000006170	-	100	97.706	ENSTRUG00000022029	rab11bb	100	97.706	Takifugu_rubripes
ENSKMAG00000006170	-	100	96.789	ENSTNIG00000011081	rab11bb	100	96.789	Tetraodon_nigroviridis
ENSKMAG00000006170	-	99	99.537	ENSTNIG00000013182	-	100	99.537	Tetraodon_nigroviridis
ENSKMAG00000006170	-	99	95.392	ENSTNIG00000013184	-	99	95.392	Tetraodon_nigroviridis
ENSKMAG00000006170	-	93	97.044	ENSTNIG00000002003	-	100	97.044	Tetraodon_nigroviridis
ENSKMAG00000006170	-	94	97.561	ENSUAMG00000006639	-	99	97.561	Ursus_americanus
ENSKMAG00000006170	-	100	96.804	ENSXETG00000025484	rab11b.1	99	96.804	Xenopus_tropicalis
ENSKMAG00000006170	-	100	97.706	ENSXCOG00000008042	-	100	97.706	Xiphophorus_couchianus
ENSKMAG00000006170	-	100	100.000	ENSXCOG00000009190	-	100	100.000	Xiphophorus_couchianus
ENSKMAG00000006170	-	100	97.706	ENSXMAG00000011926	rab11bb	100	97.706	Xiphophorus_maculatus
ENSKMAG00000006170	-	100	99.541	ENSXMAG00000024840	-	100	99.541	Xiphophorus_maculatus