EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000006409 (Gene tree)
Gene ID: 108246883
Gene Symbol: sept12
Alias: si:dkey-23a11.2
Full Name: neuronal-specific septin-3-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 122564 bases
Position: chrLWHD01000238.1:261950-384513
Accession: 108246883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008644	MMR_HSR1	PF01926.23	3.9e-08	1	1
ENSKMAP00000008604	MMR_HSR1	PF01926.23	5.4e-08	1	1
ENSKMAP00000008579	MMR_HSR1	PF01926.23	5.7e-08	1	1
ENSKMAP00000008562	MMR_HSR1	PF01926.23	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008776	-	1020	-	ENSKMAP00000008644	339 (aa)	-	-
ENSKMAT00000008710	-	2749	XM_017434640	ENSKMAP00000008579	433 (aa)	XP_017290129	UPI0007F907FD
ENSKMAT00000008693	-	4092	XM_017434639	ENSKMAP00000008562	921 (aa)	XP_017290128	UPI0007F8FF5C
ENSKMAT00000008736	-	2586	XM_017434641	ENSKMAP00000008604	423 (aa)	XP_017290130	UPI0007F8A850

Gene Model

Click here to download ENSKMAG00000006409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000006409	sept12	87	72.109	ENSKMAG00000021717	sept3	75	70.820
ENSKMAG00000006409	sept12	84	46.875	ENSKMAG00000006586	sept4a	82	46.875
ENSKMAG00000006409	sept12	94	47.500	ENSKMAG00000003408	sept5a	83	47.500
ENSKMAG00000006409	sept12	88	72.819	ENSKMAG00000020917	sept9a	86	73.810
ENSKMAG00000006409	sept12	84	49.306	ENSKMAG00000015750	SEPT4	77	49.306
ENSKMAG00000006409	sept12	85	48.110	ENSKMAG00000002786	sept2	84	48.043
ENSKMAG00000006409	sept12	95	45.988	ENSKMAG00000015914	sept15	72	45.427
ENSKMAG00000006409	sept12	90	46.405	ENSKMAG00000003351	zgc:63587	88	46.254
ENSKMAG00000006409	sept12	92	39.617	ENSKMAG00000020207	sept6	71	39.490
ENSKMAG00000006409	sept12	93	71.111	ENSKMAG00000013474	sept9b	94	71.111
ENSKMAG00000006409	sept12	93	40.000	ENSKMAG00000010785	sept8a	74	39.688
ENSKMAG00000006409	sept12	86	48.973	ENSKMAG00000019881	sept7b	70	48.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006409	sept12	88	66.667	ENSG00000140623	SEPT12	87	64.423	Homo_sapiens
ENSKMAG00000006409	sept12	88	65.993	ENSAMEG00000001746	SEPT12	88	63.208	Ailuropoda_melanoleuca
ENSKMAG00000006409	sept12	97	88.218	ENSATEG00000007502	sept12	100	77.727	Anabas_testudineus
ENSKMAG00000006409	sept12	87	76.271	ENSACAG00000000531	-	87	76.271	Anolis_carolinensis
ENSKMAG00000006409	sept12	88	65.552	ENSANAG00000035914	SEPT12	87	63.462	Aotus_nancymaae
ENSKMAG00000006409	sept12	96	85.276	ENSAMXG00000013711	sept12	99	75.321	Astyanax_mexicanus
ENSKMAG00000006409	sept12	87	66.327	ENSBTAG00000016330	SEPT12	88	63.091	Bos_taurus
ENSKMAG00000006409	sept12	88	67.340	ENSCAFG00000019171	SEPT12	83	67.340	Canis_familiaris
ENSKMAG00000006409	sept12	88	56.902	ENSCAFG00020024938	SEPT12	92	61.977	Canis_lupus_dingo
ENSKMAG00000006409	sept12	87	66.667	ENSCHIG00000013270	SEPT12	90	63.407	Capra_hircus
ENSKMAG00000006409	sept12	88	64.983	ENSTSYG00000008537	SEPT12	87	62.939	Carlito_syrichta
ENSKMAG00000006409	sept12	86	64.948	ENSCAPG00000013691	SEPT12	80	64.948	Cavia_aperea
ENSKMAG00000006409	sept12	86	68.041	ENSCPOG00000011596	SEPT12	80	68.041	Cavia_porcellus
ENSKMAG00000006409	sept12	88	65.993	ENSCCAG00000021929	SEPT12	87	63.462	Cebus_capucinus
ENSKMAG00000006409	sept12	88	67.003	ENSCATG00000033120	SEPT12	87	64.423	Cercocebus_atys
ENSKMAG00000006409	sept12	86	67.698	ENSCLAG00000011397	SEPT12	86	64.103	Chinchilla_lanigera
ENSKMAG00000006409	sept12	88	48.113	ENSCSAG00000008975	SEPT12	87	46.847	Chlorocebus_sabaeus
ENSKMAG00000006409	sept12	52	78.947	ENSCHOG00000000698	-	51	78.947	Choloepus_hoffmanni
ENSKMAG00000006409	sept12	96	72.840	ENSCPBG00000026556	SEPT12	94	72.840	Chrysemys_picta_bellii
ENSKMAG00000006409	sept12	85	50.152	ENSCSAVG00000001804	-	100	50.152	Ciona_savignyi
ENSKMAG00000006409	sept12	88	66.330	ENSCANG00000035476	SEPT12	87	63.782	Colobus_angolensis_palliatus
ENSKMAG00000006409	sept12	75	59.108	ENSCGRG00001012476	Sept12	83	59.108	Cricetulus_griseus_chok1gshd
ENSKMAG00000006409	sept12	75	59.108	ENSCGRG00000015421	Sept12	83	59.108	Cricetulus_griseus_crigri
ENSKMAG00000006409	sept12	96	84.356	ENSCSEG00000011498	sept12	97	79.494	Cynoglossus_semilaevis
ENSKMAG00000006409	sept12	96	85.890	ENSDARG00000019191	sept12	100	80.112	Danio_rerio
ENSKMAG00000006409	sept12	87	67.230	ENSDORG00000011984	Sept12	88	64.940	Dipodomys_ordii
ENSKMAG00000006409	sept12	88	55.034	ENSETEG00000016201	SEPT12	83	55.034	Echinops_telfairi
ENSKMAG00000006409	sept12	88	67.114	ENSEBUG00000008442	sept12	57	67.114	Eptatretus_burgeri
ENSKMAG00000006409	sept12	87	56.081	ENSEASG00005000570	SEPT12	86	61.818	Equus_asinus_asinus
ENSKMAG00000006409	sept12	87	65.878	ENSECAG00000018692	SEPT12	76	65.878	Equus_caballus
ENSKMAG00000006409	sept12	88	65.772	ENSFCAG00000029843	SEPT12	88	63.009	Felis_catus
ENSKMAG00000006409	sept12	96	73.148	ENSFALG00000004482	SEPT12	86	73.148	Ficedula_albicollis
ENSKMAG00000006409	sept12	74	63.745	ENSFDAG00000016066	SEPT12	87	63.745	Fukomys_damarensis
ENSKMAG00000006409	sept12	97	93.030	ENSFHEG00000008995	sept12	94	86.016	Fundulus_heteroclitus
ENSKMAG00000006409	sept12	87	83.390	ENSGMOG00000009662	sept12	95	83.390	Gadus_morhua
ENSKMAG00000006409	sept12	85	82.143	ENSGALG00000029027	SEPT12	88	75.490	Gallus_gallus
ENSKMAG00000006409	sept12	97	92.424	ENSGAFG00000005527	sept12	100	82.195	Gambusia_affinis
ENSKMAG00000006409	sept12	96	86.544	ENSGACG00000000503	sept12	96	86.544	Gasterosteus_aculeatus
ENSKMAG00000006409	sept12	96	69.725	ENSGAGG00000016756	SEPT12	93	69.725	Gopherus_agassizii
ENSKMAG00000006409	sept12	88	65.657	ENSGGOG00000007528	SEPT12	86	62.857	Gorilla_gorilla
ENSKMAG00000006409	sept12	86	67.698	ENSHGLG00000014562	SEPT12	82	67.698	Heterocephalus_glaber_female
ENSKMAG00000006409	sept12	86	67.698	ENSHGLG00100000756	SEPT12	82	67.698	Heterocephalus_glaber_male
ENSKMAG00000006409	sept12	96	82.515	ENSIPUG00000015361	sept12	93	78.249	Ictalurus_punctatus
ENSKMAG00000006409	sept12	86	68.151	ENSSTOG00000012312	SEPT12	86	65.595	Ictidomys_tridecemlineatus
ENSKMAG00000006409	sept12	79	66.543	ENSJJAG00000024267	Sept12	87	66.543	Jaculus_jaculus
ENSKMAG00000006409	sept12	97	86.103	ENSLBEG00000004076	sept12	100	83.003	Labrus_bergylta
ENSKMAG00000006409	sept12	96	83.129	ENSLOCG00000006723	sept12	93	83.129	Lepisosteus_oculatus
ENSKMAG00000006409	sept12	92	60.938	ENSLAFG00000030360	SEPT12	89	60.938	Loxodonta_africana
ENSKMAG00000006409	sept12	88	67.003	ENSMFAG00000043961	SEPT12	87	64.423	Macaca_fascicularis
ENSKMAG00000006409	sept12	88	67.003	ENSMLEG00000019167	SEPT12	87	64.423	Mandrillus_leucophaeus
ENSKMAG00000006409	sept12	100	85.000	ENSMAMG00000003208	sept12	99	74.515	Mastacembelus_armatus
ENSKMAG00000006409	sept12	87	77.365	ENSMGAG00000009617	SEPT12	94	72.222	Meleagris_gallopavo
ENSKMAG00000006409	sept12	88	66.667	ENSMAUG00000013139	Sept12	83	66.667	Mesocricetus_auratus
ENSKMAG00000006409	sept12	88	65.657	ENSMICG00000015913	SEPT12	86	63.694	Microcebus_murinus
ENSKMAG00000006409	sept12	87	67.230	ENSMOCG00000017045	Sept12	83	67.230	Microtus_ochrogaster
ENSKMAG00000006409	sept12	88	67.003	ENSMODG00000006197	SEPT12	83	67.003	Monodelphis_domestica
ENSKMAG00000006409	sept12	97	86.707	ENSMALG00000003054	sept12	99	86.446	Monopterus_albus
ENSKMAG00000006409	sept12	74	65.079	MGP_CAROLIEiJ_G0020416	Sept12	79	65.079	Mus_caroli
ENSKMAG00000006409	sept12	88	66.779	ENSMUSG00000022542	Sept12	91	64.427	Mus_musculus
ENSKMAG00000006409	sept12	74	64.286	MGP_PahariEiJ_G0016124	Sept12	79	64.286	Mus_pahari
ENSKMAG00000006409	sept12	74	65.079	MGP_SPRETEiJ_G0021310	Sept12	79	65.079	Mus_spretus
ENSKMAG00000006409	sept12	87	67.687	ENSMPUG00000014915	SEPT12	88	64.353	Mustela_putorius_furo
ENSKMAG00000006409	sept12	92	62.939	ENSMLUG00000003525	SEPT12	89	62.939	Myotis_lucifugus
ENSKMAG00000006409	sept12	87	67.230	ENSNGAG00000021915	Sept12	83	67.230	Nannospalax_galili
ENSKMAG00000006409	sept12	88	62.963	ENSNLEG00000009906	SEPT12	89	61.859	Nomascus_leucogenys
ENSKMAG00000006409	sept12	65	62.443	ENSMEUG00000003153	SEPT12	96	60.759	Notamacropus_eugenii
ENSKMAG00000006409	sept12	92	64.744	ENSODEG00000013145	SEPT12	87	64.744	Octodon_degus
ENSKMAG00000006409	sept12	88	65.436	ENSOCUG00000008343	SEPT12	89	62.696	Oryctolagus_cuniculus
ENSKMAG00000006409	sept12	96	89.815	ENSORLG00000019251	-	96	89.815	Oryzias_latipes
ENSKMAG00000006409	sept12	97	89.091	ENSORLG00015007797	-	97	90.093	Oryzias_latipes_hsok
ENSKMAG00000006409	sept12	97	89.394	ENSOMEG00000002676	-	99	75.355	Oryzias_melastigma
ENSKMAG00000006409	sept12	88	66.330	ENSOGAG00000025966	SEPT12	87	64.331	Otolemur_garnettii
ENSKMAG00000006409	sept12	87	66.327	ENSOARG00000003930	SEPT12	90	63.091	Ovis_aries
ENSKMAG00000006409	sept12	88	66.667	ENSPPAG00000033910	SEPT12	87	64.103	Pan_paniscus
ENSKMAG00000006409	sept12	88	55.369	ENSPPRG00000006622	SEPT12	87	53.292	Panthera_pardus
ENSKMAG00000006409	sept12	88	65.552	ENSPTIG00000015526	SEPT12	88	63.009	Panthera_tigris_altaica
ENSKMAG00000006409	sept12	88	66.667	ENSPTRG00000007728	SEPT12	87	64.103	Pan_troglodytes
ENSKMAG00000006409	sept12	88	67.003	ENSPANG00000022807	SEPT12	87	64.423	Papio_anubis
ENSKMAG00000006409	sept12	96	78.395	ENSPKIG00000019480	sept12	87	78.395	Paramormyrops_kingsleyae
ENSKMAG00000006409	sept12	95	78.086	ENSPKIG00000009934	-	95	78.086	Paramormyrops_kingsleyae
ENSKMAG00000006409	sept12	84	62.847	ENSPSIG00000014795	SEPT12	82	63.481	Pelodiscus_sinensis
ENSKMAG00000006409	sept12	98	74.561	ENSPMGG00000019506	-	100	73.927	Periophthalmus_magnuspinnatus
ENSKMAG00000006409	sept12	88	67.340	ENSPCIG00000026671	SEPT12	86	66.450	Phascolarctos_cinereus
ENSKMAG00000006409	sept12	99	90.533	ENSPFOG00000015822	sept12	100	88.235	Poecilia_formosa
ENSKMAG00000006409	sept12	97	92.121	ENSPLAG00000004719	sept12	97	89.021	Poecilia_latipinna
ENSKMAG00000006409	sept12	97	92.121	ENSPMEG00000022516	sept12	97	89.021	Poecilia_mexicana
ENSKMAG00000006409	sept12	88	66.667	ENSPCOG00000014037	SEPT12	87	64.103	Propithecus_coquereli
ENSKMAG00000006409	sept12	88	67.003	ENSPVAG00000016080	SEPT12	83	64.952	Pteropus_vampyrus
ENSKMAG00000006409	sept12	99	83.186	ENSPNAG00000026381	sept12	88	84.524	Pygocentrus_nattereri
ENSKMAG00000006409	sept12	88	67.003	ENSRNOG00000003137	Sept12	88	64.217	Rattus_norvegicus
ENSKMAG00000006409	sept12	88	65.993	ENSRBIG00000024546	SEPT12	87	63.462	Rhinopithecus_bieti
ENSKMAG00000006409	sept12	88	65.993	ENSRROG00000028781	SEPT12	87	63.462	Rhinopithecus_roxellana
ENSKMAG00000006409	sept12	87	66.780	ENSSBOG00000036170	SEPT12	87	63.782	Saimiri_boliviensis_boliviensis
ENSKMAG00000006409	sept12	88	67.003	ENSSHAG00000007036	SEPT12	86	64.873	Sarcophilus_harrisii
ENSKMAG00000006409	sept12	93	78.025	ENSSFOG00015010148	-	96	73.547	Scleropages_formosus
ENSKMAG00000006409	sept12	96	82.099	ENSSFOG00015023684	sept12	98	74.659	Scleropages_formosus
ENSKMAG00000006409	sept12	98	86.145	ENSSMAG00000015399	sept12	99	75.116	Scophthalmus_maximus
ENSKMAG00000006409	sept12	98	89.157	ENSSDUG00000018368	sept12	100	63.843	Seriola_dumerili
ENSKMAG00000006409	sept12	92	73.016	ENSSPUG00000009703	SEPT12	92	73.016	Sphenodon_punctatus
ENSKMAG00000006409	sept12	87	73.469	ENSTGUG00000003705	SEPT12	99	73.469	Taeniopygia_guttata
ENSKMAG00000006409	sept12	93	83.861	ENSTRUG00000021364	sept12	93	70.163	Takifugu_rubripes
ENSKMAG00000006409	sept12	88	66.443	ENSTTRG00000005489	SEPT12	83	64.537	Tursiops_truncatus
ENSKMAG00000006409	sept12	88	56.229	ENSUMAG00000002994	SEPT12	93	62.346	Ursus_maritimus
ENSKMAG00000006409	sept12	60	61.386	ENSVPAG00000010635	-	76	61.386	Vicugna_pacos
ENSKMAG00000006409	sept12	88	67.340	ENSVVUG00000016536	SEPT12	89	64.465	Vulpes_vulpes
ENSKMAG00000006409	sept12	87	75.503	ENSXETG00000009151	sept12	90	75.503	Xenopus_tropicalis
ENSKMAG00000006409	sept12	97	91.515	ENSXCOG00000007643	sept12	100	87.675	Xiphophorus_couchianus
ENSKMAG00000006409	sept12	97	91.212	ENSXMAG00000012528	sept12	100	78.851	Xiphophorus_maculatus