EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000006468 (Gene tree)
Gene ID: 108234875
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 11019 bases
Position: chrLWHD01000030.1:4109026-4120044
Accession: 108234875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008607	RRM_1	PF00076.22	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008739	-	2797	XM_017414472	ENSKMAP00000008607	610 (aa)	XP_017269961	UPI0007F8AE5B

Gene Model

Click here to download ENSKMAG00000006468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000006468	-	53	41.358	ENSKMAG00000016610	si:dkey-33c12.4	50	41.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006468	-	64	30.337	ENSAPOG00000001034	-	56	37.126	Acanthochromis_polyacanthus
ENSKMAG00000006468	-	99	58.009	ENSAPOG00000022403	-	98	60.658	Acanthochromis_polyacanthus
ENSKMAG00000006468	-	99	57.919	ENSAOCG00000000431	-	98	59.969	Amphiprion_ocellaris
ENSKMAG00000006468	-	99	58.179	ENSAPEG00000023603	-	98	59.663	Amphiprion_percula
ENSKMAG00000006468	-	99	58.685	ENSATEG00000018302	-	98	58.414	Anabas_testudineus
ENSKMAG00000006468	-	97	60.709	ENSACLG00000003019	-	99	60.905	Astatotilapia_calliptera
ENSKMAG00000006468	-	56	41.429	ENSACLG00000014192	si:dkey-33c12.4	55	40.616	Astatotilapia_calliptera
ENSKMAG00000006468	-	74	45.376	ENSAMXG00000010871	si:dkey-33c12.4	62	47.170	Astyanax_mexicanus
ENSKMAG00000006468	-	61	31.117	ENSCPBG00000024454	-	52	31.186	Chrysemys_picta_bellii
ENSKMAG00000006468	-	84	53.916	ENSCSEG00000002755	-	99	49.226	Cynoglossus_semilaevis
ENSKMAG00000006468	-	97	63.740	ENSCVAG00000004187	-	100	63.047	Cyprinodon_variegatus
ENSKMAG00000006468	-	63	47.970	ENSDARG00000057890	si:dkey-33c12.4	66	43.777	Danio_rerio
ENSKMAG00000006468	-	52	39.241	ENSDARG00000039082	zgc:123010	78	39.241	Danio_rerio
ENSKMAG00000006468	-	86	41.889	ENSELUG00000001633	-	66	44.541	Esox_lucius
ENSKMAG00000006468	-	78	41.040	ENSELUG00000002009	si:dkey-33c12.4	87	39.426	Esox_lucius
ENSKMAG00000006468	-	55	40.395	ENSFHEG00000005521	si:dkey-33c12.4	50	42.508	Fundulus_heteroclitus
ENSKMAG00000006468	-	91	65.035	ENSFHEG00000009983	-	96	64.336	Fundulus_heteroclitus
ENSKMAG00000006468	-	54	42.183	ENSGAFG00000017596	si:dkey-33c12.4	51	41.399	Gambusia_affinis
ENSKMAG00000006468	-	100	64.567	ENSGAFG00000016594	-	98	66.195	Gambusia_affinis
ENSKMAG00000006468	-	62	30.263	ENSGACG00000007620	zgc:123010	65	41.477	Gasterosteus_aculeatus
ENSKMAG00000006468	-	56	41.834	ENSHBUG00000010735	si:dkey-33c12.4	52	41.834	Haplochromis_burtoni
ENSKMAG00000006468	-	75	43.552	ENSIPUG00000005998	si:dkey-33c12.4	69	45.455	Ictalurus_punctatus
ENSKMAG00000006468	-	56	39.045	ENSLBEG00000021088	-	71	32.762	Labrus_bergylta
ENSKMAG00000006468	-	56	39.216	ENSLBEG00000017203	-	76	32.563	Labrus_bergylta
ENSKMAG00000006468	-	99	54.016	ENSLBEG00000028046	-	97	50.946	Labrus_bergylta
ENSKMAG00000006468	-	63	41.317	ENSLACG00000004602	-	57	50.199	Latimeria_chalumnae
ENSKMAG00000006468	-	68	45.176	ENSLOCG00000001861	-	60	45.823	Lepisosteus_oculatus
ENSKMAG00000006468	-	97	54.664	ENSMAMG00000004311	-	99	53.530	Mastacembelus_armatus
ENSKMAG00000006468	-	56	41.429	ENSMZEG00005014276	si:dkey-33c12.4	52	41.714	Maylandia_zebra
ENSKMAG00000006468	-	97	61.897	ENSMZEG00005000585	-	99	60.743	Maylandia_zebra
ENSKMAG00000006468	-	55	34.538	ENSMZEG00005014740	-	60	39.326	Maylandia_zebra
ENSKMAG00000006468	-	99	56.394	ENSMALG00000003167	-	97	55.657	Monopterus_albus
ENSKMAG00000006468	-	73	36.590	ENSMALG00000002265	si:dkey-33c12.4	73	36.853	Monopterus_albus
ENSKMAG00000006468	-	51	32.063	ENSONIG00000000297	-	84	30.476	Oreochromis_niloticus
ENSKMAG00000006468	-	97	58.320	ENSONIG00000007538	-	99	77.297	Oreochromis_niloticus
ENSKMAG00000006468	-	52	41.379	ENSONIG00000012263	-	85	40.964	Oreochromis_niloticus
ENSKMAG00000006468	-	97	58.564	ENSORLG00000030385	-	95	58.699	Oryzias_latipes
ENSKMAG00000006468	-	71	31.992	ENSORLG00000029651	si:dkey-33c12.4	71	30.252	Oryzias_latipes
ENSKMAG00000006468	-	50	34.868	ENSORLG00020003457	zgc:123010	52	43.575	Oryzias_latipes_hni
ENSKMAG00000006468	-	97	59.061	ENSORLG00015008400	-	95	58.576	Oryzias_latipes_hsok
ENSKMAG00000006468	-	99	60.447	ENSOMEG00000009428	-	98	59.177	Oryzias_melastigma
ENSKMAG00000006468	-	93	44.077	ENSPKIG00000011819	-	67	46.022	Paramormyrops_kingsleyae
ENSKMAG00000006468	-	51	30.744	ENSPMAG00000009352	-	81	45.570	Petromyzon_marinus
ENSKMAG00000006468	-	74	66.879	ENSPFOG00000017092	-	96	67.728	Poecilia_formosa
ENSKMAG00000006468	-	51	43.558	ENSPLAG00000022537	si:dkey-33c12.4	50	44.340	Poecilia_latipinna
ENSKMAG00000006468	-	97	66.450	ENSPMEG00000009905	-	97	67.101	Poecilia_mexicana
ENSKMAG00000006468	-	71	31.409	ENSPMEG00000005092	zgc:123010	71	37.975	Poecilia_mexicana
ENSKMAG00000006468	-	97	65.905	ENSPREG00000016861	-	97	66.830	Poecilia_reticulata
ENSKMAG00000006468	-	97	59.265	ENSPNYG00000001047	-	99	60.582	Pundamilia_nyererei
ENSKMAG00000006468	-	50	31.475	ENSPNYG00000023304	-	58	44.203	Pundamilia_nyererei
ENSKMAG00000006468	-	56	41.429	ENSPNYG00000018262	si:dkey-33c12.4	52	41.714	Pundamilia_nyererei
ENSKMAG00000006468	-	63	48.705	ENSPNAG00000018386	si:dkey-33c12.4	65	46.396	Pygocentrus_nattereri
ENSKMAG00000006468	-	60	31.436	ENSSFOG00015021394	zgc:123010	52	40.500	Scleropages_formosus
ENSKMAG00000006468	-	66	46.402	ENSSFOG00015009199	-	70	43.791	Scleropages_formosus
ENSKMAG00000006468	-	66	47.631	ENSSFOG00015005186	-	65	45.778	Scleropages_formosus
ENSKMAG00000006468	-	99	58.906	ENSSMAG00000010960	-	97	58.740	Scophthalmus_maximus
ENSKMAG00000006468	-	64	32.398	ENSSMAG00000002904	zgc:123010	50	34.884	Scophthalmus_maximus
ENSKMAG00000006468	-	72	40.481	ENSSDUG00000003213	si:dkey-33c12.4	68	40.235	Seriola_dumerili
ENSKMAG00000006468	-	96	61.981	ENSSDUG00000010976	-	99	61.821	Seriola_dumerili
ENSKMAG00000006468	-	64	42.118	ENSSLDG00000009448	si:dkey-33c12.4	68	38.496	Seriola_lalandi_dorsalis
ENSKMAG00000006468	-	93	63.018	ENSSLDG00000012846	-	99	62.355	Seriola_lalandi_dorsalis
ENSKMAG00000006468	-	99	57.919	ENSSPAG00000004843	-	98	60.000	Stegastes_partitus
ENSKMAG00000006468	-	99	44.976	ENSTRUG00000000057	-	98	41.301	Takifugu_rubripes
ENSKMAG00000006468	-	50	39.344	ENSTNIG00000010542	-	81	39.482	Tetraodon_nigroviridis
ENSKMAG00000006468	-	54	40.580	ENSXMAG00000018535	si:dkey-33c12.4	51	40.708	Xiphophorus_maculatus
ENSKMAG00000006468	-	71	30.023	ENSXMAG00000002598	zgc:123010	78	32.237	Xiphophorus_maculatus