EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000006483 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7027 bases
Position: chrLWHD01001642.1:455-7481
Accession: 108228868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008632	YTH	PF04146.15	1.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008764	-	2003	XM_017404495	ENSKMAP00000008632	479 (aa)	XP_017259984	-

Gene Model

Click here to download ENSKMAG00000006483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006483	ythdc1	85	65.533	ENSG00000083896	YTHDC1	57	60.502	Homo_sapiens
ENSKMAG00000006483	ythdc1	70	88.589	ENSAPOG00000013997	ythdc1	58	76.642	Acanthochromis_polyacanthus
ENSKMAG00000006483	ythdc1	85	65.525	ENSAMEG00000005688	YTHDC1	57	60.731	Ailuropoda_melanoleuca
ENSKMAG00000006483	ythdc1	87	79.036	ENSACIG00000019728	ythdc1	62	100.000	Amphilophus_citrinellus
ENSKMAG00000006483	ythdc1	86	92.214	ENSAOCG00000000239	ythdc1	60	91.241	Amphiprion_ocellaris
ENSKMAG00000006483	ythdc1	71	92.690	ENSAPEG00000000618	ythdc1	54	92.690	Amphiprion_percula
ENSKMAG00000006483	ythdc1	77	88.378	ENSATEG00000023007	ythdc1	56	91.813	Anabas_testudineus
ENSKMAG00000006483	ythdc1	85	65.982	ENSAPLG00000009921	YTHDC1	60	60.860	Anas_platyrhynchos
ENSKMAG00000006483	ythdc1	85	64.155	ENSACAG00000009697	YTHDC1	59	59.502	Anolis_carolinensis
ENSKMAG00000006483	ythdc1	85	65.533	ENSANAG00000001522	YTHDC1	58	59.641	Aotus_nancymaae
ENSKMAG00000006483	ythdc1	87	93.012	ENSACLG00000019371	ythdc1	60	91.484	Astatotilapia_calliptera
ENSKMAG00000006483	ythdc1	86	72.837	ENSAMXG00000006978	ythdc1	62	66.742	Astyanax_mexicanus
ENSKMAG00000006483	ythdc1	85	65.068	ENSBTAG00000015572	YTHDC1	57	60.274	Bos_taurus
ENSKMAG00000006483	ythdc1	85	65.533	ENSCJAG00000009934	YTHDC1	57	60.502	Callithrix_jacchus
ENSKMAG00000006483	ythdc1	85	65.525	ENSCAFG00000002821	YTHDC1	57	60.731	Canis_familiaris
ENSKMAG00000006483	ythdc1	85	65.525	ENSCAFG00020027112	YTHDC1	57	60.731	Canis_lupus_dingo
ENSKMAG00000006483	ythdc1	85	58.473	ENSCHIG00000004810	YTHDC1	54	54.415	Capra_hircus
ENSKMAG00000006483	ythdc1	85	65.533	ENSTSYG00000011668	YTHDC1	57	60.502	Carlito_syrichta
ENSKMAG00000006483	ythdc1	85	65.533	ENSCCAG00000035754	YTHDC1	57	60.502	Cebus_capucinus
ENSKMAG00000006483	ythdc1	85	65.476	ENSCATG00000036320	YTHDC1	56	60.476	Cercocebus_atys
ENSKMAG00000006483	ythdc1	86	64.637	ENSCLAG00000005482	YTHDC1	58	59.417	Chinchilla_lanigera
ENSKMAG00000006483	ythdc1	85	65.533	ENSCSAG00000005252	YTHDC1	57	60.502	Chlorocebus_sabaeus
ENSKMAG00000006483	ythdc1	62	76.259	ENSCHOG00000006136	-	60	78.400	Choloepus_hoffmanni
ENSKMAG00000006483	ythdc1	86	69.880	ENSCPBG00000021965	YTHDC1	63	60.860	Chrysemys_picta_bellii
ENSKMAG00000006483	ythdc1	85	65.533	ENSCANG00000004769	YTHDC1	57	60.502	Colobus_angolensis_palliatus
ENSKMAG00000006483	ythdc1	85	65.238	ENSCGRG00001000816	Ythdc1	57	59.417	Cricetulus_griseus_chok1gshd
ENSKMAG00000006483	ythdc1	85	65.306	ENSCGRG00000009807	Ythdc1	57	60.502	Cricetulus_griseus_crigri
ENSKMAG00000006483	ythdc1	85	88.235	ENSCSEG00000020404	ythdc1	59	86.029	Cynoglossus_semilaevis
ENSKMAG00000006483	ythdc1	86	88.321	ENSCVAG00000022349	ythdc1	60	84.915	Cyprinodon_variegatus
ENSKMAG00000006483	ythdc1	86	70.843	ENSDARG00000051953	ythdc1	58	66.265	Danio_rerio
ENSKMAG00000006483	ythdc1	87	64.430	ENSDNOG00000004949	YTHDC1	57	60.502	Dasypus_novemcinctus
ENSKMAG00000006483	ythdc1	85	65.533	ENSDORG00000013045	Ythdc1	58	60.502	Dipodomys_ordii
ENSKMAG00000006483	ythdc1	85	65.525	ENSEASG00005018383	YTHDC1	61	60.959	Equus_asinus_asinus
ENSKMAG00000006483	ythdc1	85	65.525	ENSECAG00000018303	YTHDC1	61	60.959	Equus_caballus
ENSKMAG00000006483	ythdc1	85	64.853	ENSEEUG00000015466	YTHDC1	57	60.274	Erinaceus_europaeus
ENSKMAG00000006483	ythdc1	86	69.321	ENSELUG00000014029	ythdc1	58	64.169	Esox_lucius
ENSKMAG00000006483	ythdc1	85	65.525	ENSFCAG00000026791	YTHDC1	57	60.731	Felis_catus
ENSKMAG00000006483	ythdc1	88	65.197	ENSFALG00000006581	YTHDC1	69	66.216	Ficedula_albicollis
ENSKMAG00000006483	ythdc1	85	65.306	ENSFDAG00000018560	YTHDC1	58	60.502	Fukomys_damarensis
ENSKMAG00000006483	ythdc1	76	81.057	ENSGMOG00000018815	ythdc1	56	81.057	Gadus_morhua
ENSKMAG00000006483	ythdc1	85	65.753	ENSGALG00000035906	YTHDC1	55	60.849	Gallus_gallus
ENSKMAG00000006483	ythdc1	52	90.323	ENSGAFG00000001759	ythdc1	50	90.476	Gambusia_affinis
ENSKMAG00000006483	ythdc1	85	74.201	ENSGACG00000015486	ythdc1	57	70.694	Gasterosteus_aculeatus
ENSKMAG00000006483	ythdc1	86	69.639	ENSGAGG00000007108	YTHDC1	58	65.542	Gopherus_agassizii
ENSKMAG00000006483	ythdc1	85	65.476	ENSGGOG00000021958	YTHDC1	58	59.417	Gorilla_gorilla
ENSKMAG00000006483	ythdc1	87	93.012	ENSHBUG00000019288	ythdc1	60	91.484	Haplochromis_burtoni
ENSKMAG00000006483	ythdc1	85	65.238	ENSHGLG00000006319	-	58	59.417	Heterocephalus_glaber_female
ENSKMAG00000006483	ythdc1	86	50.790	ENSHGLG00000003239	-	56	47.917	Heterocephalus_glaber_female
ENSKMAG00000006483	ythdc1	86	49.103	ENSHGLG00100008060	-	57	46.207	Heterocephalus_glaber_male
ENSKMAG00000006483	ythdc1	85	64.045	ENSHGLG00100001556	-	58	58.296	Heterocephalus_glaber_male
ENSKMAG00000006483	ythdc1	82	77.919	ENSHCOG00000001520	ythdc1	65	75.568	Hippocampus_comes
ENSKMAG00000006483	ythdc1	85	71.671	ENSIPUG00000018136	ythdc1	58	67.797	Ictalurus_punctatus
ENSKMAG00000006483	ythdc1	85	64.365	ENSSTOG00000013652	YTHDC1	57	59.417	Ictidomys_tridecemlineatus
ENSKMAG00000006483	ythdc1	85	65.000	ENSJJAG00000010268	Ythdc1	58	59.641	Jaculus_jaculus
ENSKMAG00000006483	ythdc1	69	78.613	ENSLBEG00000020831	ythdc1	57	78.613	Labrus_bergylta
ENSKMAG00000006483	ythdc1	85	62.022	ENSLACG00000004893	YTHDC1	61	59.732	Latimeria_chalumnae
ENSKMAG00000006483	ythdc1	85	65.909	ENSLOCG00000003045	ythdc1	62	63.409	Lepisosteus_oculatus
ENSKMAG00000006483	ythdc1	85	64.143	ENSLAFG00000021592	YTHDC1	65	65.097	Loxodonta_africana
ENSKMAG00000006483	ythdc1	85	65.476	ENSMFAG00000031927	YTHDC1	58	59.417	Macaca_fascicularis
ENSKMAG00000006483	ythdc1	85	65.533	ENSMMUG00000002265	YTHDC1	57	60.502	Macaca_mulatta
ENSKMAG00000006483	ythdc1	85	65.533	ENSMNEG00000033751	YTHDC1	57	60.502	Macaca_nemestrina
ENSKMAG00000006483	ythdc1	85	65.533	ENSMLEG00000042147	YTHDC1	57	60.502	Mandrillus_leucophaeus
ENSKMAG00000006483	ythdc1	85	93.580	ENSMAMG00000013122	ythdc1	59	91.990	Mastacembelus_armatus
ENSKMAG00000006483	ythdc1	87	93.012	ENSMZEG00005023173	ythdc1	60	91.484	Maylandia_zebra
ENSKMAG00000006483	ythdc1	85	65.753	ENSMGAG00000010391	YTHDC1	59	60.633	Meleagris_gallopavo
ENSKMAG00000006483	ythdc1	85	65.238	ENSMAUG00000001286	Ythdc1	57	59.417	Mesocricetus_auratus
ENSKMAG00000006483	ythdc1	87	65.333	ENSMICG00000034640	YTHDC1	56	60.959	Microcebus_murinus
ENSKMAG00000006483	ythdc1	85	65.238	ENSMOCG00000020201	Ythdc1	58	59.417	Microtus_ochrogaster
ENSKMAG00000006483	ythdc1	59	83.721	ENSMMOG00000021200	ythdc1	59	69.930	Mola_mola
ENSKMAG00000006483	ythdc1	92	43.933	ENSMODG00000009173	-	60	56.794	Monodelphis_domestica
ENSKMAG00000006483	ythdc1	85	65.525	ENSMODG00000020754	-	59	60.633	Monodelphis_domestica
ENSKMAG00000006483	ythdc1	71	48.991	ENSMODG00000004117	-	75	56.126	Monodelphis_domestica
ENSKMAG00000006483	ythdc1	71	92.059	ENSMALG00000013412	ythdc1	55	92.216	Monopterus_albus
ENSKMAG00000006483	ythdc1	85	65.306	MGP_CAROLIEiJ_G0027347	Ythdc1	57	60.502	Mus_caroli
ENSKMAG00000006483	ythdc1	87	64.889	ENSMUSG00000035851	Ythdc1	57	60.502	Mus_musculus
ENSKMAG00000006483	ythdc1	87	64.889	MGP_PahariEiJ_G0017126	Ythdc1	57	60.502	Mus_pahari
ENSKMAG00000006483	ythdc1	87	64.889	MGP_SPRETEiJ_G0028339	Ythdc1	57	60.502	Mus_spretus
ENSKMAG00000006483	ythdc1	85	65.297	ENSMLUG00000016300	YTHDC1	58	60.502	Myotis_lucifugus
ENSKMAG00000006483	ythdc1	87	87.470	ENSNBRG00000007663	ythdc1	71	84.428	Neolamprologus_brichardi
ENSKMAG00000006483	ythdc1	85	63.474	ENSNLEG00000009202	YTHDC1	57	58.520	Nomascus_leucogenys
ENSKMAG00000006483	ythdc1	85	64.626	ENSODEG00000001715	YTHDC1	57	60.274	Octodon_degus
ENSKMAG00000006483	ythdc1	87	93.494	ENSONIG00000012651	ythdc1	60	91.971	Oreochromis_niloticus
ENSKMAG00000006483	ythdc1	86	87.105	ENSORLG00000030544	ythdc1	61	85.645	Oryzias_latipes
ENSKMAG00000006483	ythdc1	87	87.711	ENSORLG00020019316	ythdc1	61	85.888	Oryzias_latipes_hni
ENSKMAG00000006483	ythdc1	86	82.494	ENSOMEG00000000551	ythdc1	61	82.254	Oryzias_melastigma
ENSKMAG00000006483	ythdc1	85	65.760	ENSOGAG00000003362	YTHDC1	57	60.731	Otolemur_garnettii
ENSKMAG00000006483	ythdc1	85	65.068	ENSOARG00000008633	YTHDC1	57	60.274	Ovis_aries
ENSKMAG00000006483	ythdc1	85	65.476	ENSPPAG00000041315	YTHDC1	58	59.417	Pan_paniscus
ENSKMAG00000006483	ythdc1	85	65.000	ENSPPRG00000011979	YTHDC1	56	60.714	Panthera_pardus
ENSKMAG00000006483	ythdc1	85	64.524	ENSPTIG00000015527	YTHDC1	58	59.193	Panthera_tigris_altaica
ENSKMAG00000006483	ythdc1	85	65.476	ENSPTRG00000016105	YTHDC1	58	59.417	Pan_troglodytes
ENSKMAG00000006483	ythdc1	85	65.476	ENSPANG00000021590	YTHDC1	56	60.476	Papio_anubis
ENSKMAG00000006483	ythdc1	86	68.849	ENSPKIG00000018497	ythdc1	59	64.027	Paramormyrops_kingsleyae
ENSKMAG00000006483	ythdc1	85	65.297	ENSPSIG00000002782	YTHDC1	60	60.633	Pelodiscus_sinensis
ENSKMAG00000006483	ythdc1	67	73.375	ENSPMGG00000000970	-	63	71.827	Periophthalmus_magnuspinnatus
ENSKMAG00000006483	ythdc1	85	65.306	ENSPEMG00000013850	Ythdc1	58	60.502	Peromyscus_maniculatus_bairdii
ENSKMAG00000006483	ythdc1	85	65.525	ENSPCIG00000006870	YTHDC1	59	60.633	Phascolarctos_cinereus
ENSKMAG00000006483	ythdc1	85	88.725	ENSPFOG00000013404	ythdc1	61	86.520	Poecilia_formosa
ENSKMAG00000006483	ythdc1	85	88.725	ENSPLAG00000011079	ythdc1	86	86.520	Poecilia_latipinna
ENSKMAG00000006483	ythdc1	85	88.725	ENSPMEG00000009238	ythdc1	61	86.520	Poecilia_mexicana
ENSKMAG00000006483	ythdc1	85	73.786	ENSPREG00000016973	ythdc1	54	90.769	Poecilia_reticulata
ENSKMAG00000006483	ythdc1	85	65.533	ENSPPYG00000014726	YTHDC1	65	60.502	Pongo_abelii
ENSKMAG00000006483	ythdc1	87	60.952	ENSPCOG00000019105	YTHDC1	55	56.161	Propithecus_coquereli
ENSKMAG00000006483	ythdc1	85	62.557	ENSPVAG00000015551	YTHDC1	56	57.763	Pteropus_vampyrus
ENSKMAG00000006483	ythdc1	87	93.012	ENSPNYG00000011687	ythdc1	60	91.484	Pundamilia_nyererei
ENSKMAG00000006483	ythdc1	86	73.621	ENSPNAG00000028365	ythdc1	57	68.204	Pygocentrus_nattereri
ENSKMAG00000006483	ythdc1	85	64.143	ENSRNOG00000001996	Ythdc1	57	59.417	Rattus_norvegicus
ENSKMAG00000006483	ythdc1	85	64.653	ENSRBIG00000028279	YTHDC1	58	59.685	Rhinopithecus_bieti
ENSKMAG00000006483	ythdc1	85	65.533	ENSRROG00000035028	YTHDC1	57	60.502	Rhinopithecus_roxellana
ENSKMAG00000006483	ythdc1	85	65.476	ENSSBOG00000022353	YTHDC1	58	59.417	Saimiri_boliviensis_boliviensis
ENSKMAG00000006483	ythdc1	85	65.525	ENSSHAG00000002538	YTHDC1	65	60.959	Sarcophilus_harrisii
ENSKMAG00000006483	ythdc1	86	72.464	ENSSFOG00015003298	ythdc1	59	68.116	Scleropages_formosus
ENSKMAG00000006483	ythdc1	85	89.383	ENSSMAG00000009086	ythdc1	61	88.835	Scophthalmus_maximus
ENSKMAG00000006483	ythdc1	85	93.086	ENSSDUG00000022008	ythdc1	60	91.262	Seriola_dumerili
ENSKMAG00000006483	ythdc1	85	93.086	ENSSLDG00000007926	ythdc1	60	91.262	Seriola_lalandi_dorsalis
ENSKMAG00000006483	ythdc1	85	65.068	ENSSARG00000010960	YTHDC1	72	60.502	Sorex_araneus
ENSKMAG00000006483	ythdc1	85	65.450	ENSSPUG00000009357	YTHDC1	62	60.181	Sphenodon_punctatus
ENSKMAG00000006483	ythdc1	86	91.748	ENSSPAG00000011449	ythdc1	60	91.262	Stegastes_partitus
ENSKMAG00000006483	ythdc1	85	65.525	ENSSSCG00000035505	YTHDC1	61	59.865	Sus_scrofa
ENSKMAG00000006483	ythdc1	85	65.753	ENSTGUG00000004452	-	59	60.860	Taeniopygia_guttata
ENSKMAG00000006483	ythdc1	85	77.262	ENSTRUG00000010142	ythdc1	63	77.262	Takifugu_rubripes
ENSKMAG00000006483	ythdc1	89	83.138	ENSTNIG00000013243	ythdc1	62	84.352	Tetraodon_nigroviridis
ENSKMAG00000006483	ythdc1	85	64.384	ENSTTRG00000005083	YTHDC1	57	59.589	Tursiops_truncatus
ENSKMAG00000006483	ythdc1	85	65.525	ENSUAMG00000010388	YTHDC1	61	60.731	Ursus_americanus
ENSKMAG00000006483	ythdc1	86	57.428	ENSUMAG00000013668	YTHDC1	61	52.928	Ursus_maritimus
ENSKMAG00000006483	ythdc1	86	64.169	ENSVPAG00000009040	YTHDC1	56	60.238	Vicugna_pacos
ENSKMAG00000006483	ythdc1	85	65.525	ENSVVUG00000005387	YTHDC1	61	60.959	Vulpes_vulpes
ENSKMAG00000006483	ythdc1	85	68.537	ENSXETG00000017960	ythdc1	57	65.122	Xenopus_tropicalis
ENSKMAG00000006483	ythdc1	52	69.170	ENSXCOG00000000530	ythdc1	55	68.354	Xiphophorus_couchianus
ENSKMAG00000006483	ythdc1	85	88.480	ENSXMAG00000005196	ythdc1	61	86.275	Xiphophorus_maculatus