EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000006528 (Gene tree)
Gene ID: 108242245
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7537 bases
Position: chrLWHD01000099.1:1060869-1068405
Accession: 108242245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008709	zf-CCHC	PF00098.23	1.7e-05	1	1
ENSKMAP00000008709	RRM_1	PF00076.22	1.6e-30	1	2
ENSKMAP00000008709	RRM_1	PF00076.22	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008841	-	3737	XM_017426983	ENSKMAP00000008709	392 (aa)	XP_017282472	UPI0007F8D4F0

Gene Model

Click here to download ENSKMAG00000006528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006528	-	100	60.197	ENSACLG00000007740	-	100	59.214	Astatotilapia_calliptera
ENSKMAG00000006528	-	99	46.482	ENSAMXG00000036611	rbm4.1	99	46.667	Astyanax_mexicanus
ENSKMAG00000006528	-	100	58.881	ENSCSEG00000014359	-	100	57.421	Cynoglossus_semilaevis
ENSKMAG00000006528	-	99	43.510	ENSDARG00000055080	rbm4.2	99	44.975	Danio_rerio
ENSKMAG00000006528	-	99	44.368	ENSDARG00000036386	rbm4.1	79	68.841	Danio_rerio
ENSKMAG00000006528	-	99	46.032	ENSELUG00000013205	rbm4.1	99	45.805	Esox_lucius
ENSKMAG00000006528	-	99	43.578	ENSFHEG00000022926	rbm4.1	75	50.000	Fundulus_heteroclitus
ENSKMAG00000006528	-	71	59.932	ENSGMOG00000007455	-	100	52.657	Gadus_morhua
ENSKMAG00000006528	-	99	45.266	ENSGAFG00000019302	rbm4.1	99	43.349	Gambusia_affinis
ENSKMAG00000006528	-	77	49.671	ENSGACG00000000822	rbm4.1	70	51.237	Gasterosteus_aculeatus
ENSKMAG00000006528	-	100	59.113	ENSGACG00000000821	-	100	57.635	Gasterosteus_aculeatus
ENSKMAG00000006528	-	73	52.025	ENSHCOG00000011403	rbm4.1	92	46.438	Hippocampus_comes
ENSKMAG00000006528	-	100	60.494	ENSLBEG00000019756	-	100	59.705	Labrus_bergylta
ENSKMAG00000006528	-	100	61.425	ENSMAMG00000001760	-	100	60.194	Mastacembelus_armatus
ENSKMAG00000006528	-	52	57.143	ENSMZEG00005028158	-	69	53.917	Maylandia_zebra
ENSKMAG00000006528	-	100	63.814	ENSMALG00000020557	-	100	61.614	Monopterus_albus
ENSKMAG00000006528	-	99	43.578	ENSPKIG00000020805	rbm4.1	85	65.217	Paramormyrops_kingsleyae
ENSKMAG00000006528	-	100	62.095	ENSPFOG00000012685	-	100	61.845	Poecilia_formosa
ENSKMAG00000006528	-	99	45.497	ENSPFOG00000012675	rbm4.1	99	43.807	Poecilia_formosa
ENSKMAG00000006528	-	99	45.266	ENSPLAG00000018572	rbm4.1	99	43.807	Poecilia_latipinna
ENSKMAG00000006528	-	99	45.266	ENSPMEG00000006290	rbm4.1	99	43.807	Poecilia_mexicana
ENSKMAG00000006528	-	100	58.396	ENSPREG00000003764	-	100	57.895	Poecilia_reticulata
ENSKMAG00000006528	-	99	45.266	ENSPREG00000003724	rbm4.1	99	43.807	Poecilia_reticulata
ENSKMAG00000006528	-	99	45.366	ENSPNAG00000013057	rbm4.2	99	44.612	Pygocentrus_nattereri
ENSKMAG00000006528	-	100	63.636	ENSSDUG00000003936	-	100	61.893	Seriola_dumerili
ENSKMAG00000006528	-	100	63.391	ENSSLDG00000013157	-	100	61.165	Seriola_lalandi_dorsalis
ENSKMAG00000006528	-	100	62.654	ENSSPAG00000019046	-	100	60.934	Stegastes_partitus
ENSKMAG00000006528	-	100	58.765	ENSTRUG00000013328	-	100	56.543	Takifugu_rubripes
ENSKMAG00000006528	-	92	47.439	ENSTNIG00000004821	rbm4.1	53	73.864	Tetraodon_nigroviridis
ENSKMAG00000006528	-	100	56.204	ENSTNIG00000000316	-	100	55.309	Tetraodon_nigroviridis
ENSKMAG00000006528	-	84	41.390	ENSXETG00000026649	rbm4b	87	40.469	Xenopus_tropicalis
ENSKMAG00000006528	-	99	45.035	ENSXCOG00000003731	rbm4.1	99	43.807	Xiphophorus_couchianus
ENSKMAG00000006528	-	99	45.035	ENSXMAG00000008069	rbm4.1	99	43.807	Xiphophorus_maculatus
ENSKMAG00000006528	-	100	61.347	ENSXMAG00000008059	-	100	61.347	Xiphophorus_maculatus