EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000006556 (Gene tree)
Gene ID: 108242305
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5386 bases
Position: chrLWHD01000099.1:1068605-1073990
Accession: 108242305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000008726	zf-CCHC	PF00098.23	3.5e-08	1	1
ENSKMAP00000008726	RRM_5	PF13893.6	6.6e-07	1	1
ENSKMAP00000008726	RRM_1	PF00076.22	1.3e-30	1	2
ENSKMAP00000008726	RRM_1	PF00076.22	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000008858	-	3187	XM_017427074	ENSKMAP00000008726	414 (aa)	XP_017282563	UPI0007F93874

Gene Model

Click here to download ENSKMAG00000006556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000006556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000006556	rbm4.1	64	55.333	ENSKMAG00000017468	rbm4.3	97	50.000
ENSKMAG00000006556	rbm4.1	65	53.333	ENSKMAG00000014541	rbm4.3	95	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000006556	rbm4.1	100	80.569	ENSAPOG00000012353	rbm4.1	100	80.569	Acanthochromis_polyacanthus
ENSKMAG00000006556	rbm4.1	100	79.433	ENSACIG00000016482	rbm4.1	100	79.433	Amphilophus_citrinellus
ENSKMAG00000006556	rbm4.1	100	80.569	ENSAOCG00000010915	rbm4.1	100	80.569	Amphiprion_ocellaris
ENSKMAG00000006556	rbm4.1	100	80.569	ENSAPEG00000009494	rbm4.1	100	80.569	Amphiprion_percula
ENSKMAG00000006556	rbm4.1	100	77.778	ENSATEG00000001904	rbm4.1	100	78.014	Anabas_testudineus
ENSKMAG00000006556	rbm4.1	100	80.142	ENSACLG00000007722	rbm4.1	100	80.142	Astatotilapia_calliptera
ENSKMAG00000006556	rbm4.1	96	48.267	ENSACLG00000007740	-	95	48.371	Astatotilapia_calliptera
ENSKMAG00000006556	rbm4.1	100	59.189	ENSAMXG00000036611	rbm4.1	100	60.382	Astyanax_mexicanus
ENSKMAG00000006556	rbm4.1	100	67.294	ENSCSEG00000014365	rbm4.1	100	66.824	Cynoglossus_semilaevis
ENSKMAG00000006556	rbm4.1	99	47.494	ENSCSEG00000014359	-	97	48.418	Cynoglossus_semilaevis
ENSKMAG00000006556	rbm4.1	100	81.667	ENSCVAG00000019349	rbm4.1	100	80.952	Cyprinodon_variegatus
ENSKMAG00000006556	rbm4.1	100	65.187	ENSDARG00000036386	rbm4.1	100	65.187	Danio_rerio
ENSKMAG00000006556	rbm4.1	100	48.244	ENSDARG00000055080	rbm4.2	100	49.882	Danio_rerio
ENSKMAG00000006556	rbm4.1	100	63.208	ENSELUG00000013205	rbm4.1	100	64.000	Esox_lucius
ENSKMAG00000006556	rbm4.1	100	78.622	ENSFHEG00000022926	rbm4.1	100	78.622	Fundulus_heteroclitus
ENSKMAG00000006556	rbm4.1	90	50.653	ENSGMOG00000007455	-	92	50.761	Gadus_morhua
ENSKMAG00000006556	rbm4.1	100	63.593	ENSGMOG00000007464	rbm4.1	100	64.941	Gadus_morhua
ENSKMAG00000006556	rbm4.1	100	77.251	ENSGAFG00000019302	rbm4.1	100	76.540	Gambusia_affinis
ENSKMAG00000006556	rbm4.1	100	74.239	ENSGACG00000000822	rbm4.1	100	74.239	Gasterosteus_aculeatus
ENSKMAG00000006556	rbm4.1	94	49.235	ENSGACG00000000821	-	94	50.891	Gasterosteus_aculeatus
ENSKMAG00000006556	rbm4.1	100	80.142	ENSHBUG00000011610	rbm4.1	100	80.142	Haplochromis_burtoni
ENSKMAG00000006556	rbm4.1	95	67.734	ENSHCOG00000011403	rbm4.1	98	67.488	Hippocampus_comes
ENSKMAG00000006556	rbm4.1	100	47.170	ENSIPUG00000022937	rbm4.2	100	46.301	Ictalurus_punctatus
ENSKMAG00000006556	rbm4.1	100	60.046	ENSIPUG00000022931	rbm4.1	100	61.187	Ictalurus_punctatus
ENSKMAG00000006556	rbm4.1	100	75.592	ENSLBEG00000019782	rbm4.1	100	75.355	Labrus_bergylta
ENSKMAG00000006556	rbm4.1	95	48.866	ENSLBEG00000019756	-	90	60.510	Labrus_bergylta
ENSKMAG00000006556	rbm4.1	100	78.014	ENSMAMG00000001765	rbm4.1	100	78.014	Mastacembelus_armatus
ENSKMAG00000006556	rbm4.1	95	52.500	ENSMAMG00000001760	-	95	52.500	Mastacembelus_armatus
ENSKMAG00000006556	rbm4.1	100	80.142	ENSMZEG00005009205	rbm4.1	100	80.142	Maylandia_zebra
ENSKMAG00000006556	rbm4.1	100	76.471	ENSMMOG00000020479	rbm4.1	100	76.941	Mola_mola
ENSKMAG00000006556	rbm4.1	95	49.750	ENSMALG00000020557	-	95	50.000	Monopterus_albus
ENSKMAG00000006556	rbm4.1	100	78.436	ENSMALG00000020544	rbm4.1	100	78.436	Monopterus_albus
ENSKMAG00000006556	rbm4.1	100	80.378	ENSNBRG00000017755	rbm4.1	100	80.378	Neolamprologus_brichardi
ENSKMAG00000006556	rbm4.1	100	80.142	ENSONIG00000015730	rbm4.1	100	80.142	Oreochromis_niloticus
ENSKMAG00000006556	rbm4.1	100	75.000	ENSORLG00000012496	rbm4.1	100	75.000	Oryzias_latipes
ENSKMAG00000006556	rbm4.1	100	75.000	ENSORLG00020012454	rbm4.1	100	75.000	Oryzias_latipes_hni
ENSKMAG00000006556	rbm4.1	100	75.238	ENSORLG00015013678	rbm4.1	100	75.238	Oryzias_latipes_hsok
ENSKMAG00000006556	rbm4.1	100	75.714	ENSOMEG00000001001	rbm4.1	100	75.714	Oryzias_melastigma
ENSKMAG00000006556	rbm4.1	100	59.251	ENSPKIG00000020805	rbm4.1	85	78.261	Paramormyrops_kingsleyae
ENSKMAG00000006556	rbm4.1	100	77.488	ENSPFOG00000012675	rbm4.1	100	76.777	Poecilia_formosa
ENSKMAG00000006556	rbm4.1	95	48.363	ENSPFOG00000012685	-	95	47.859	Poecilia_formosa
ENSKMAG00000006556	rbm4.1	100	77.488	ENSPLAG00000018572	rbm4.1	100	76.777	Poecilia_latipinna
ENSKMAG00000006556	rbm4.1	100	77.488	ENSPMEG00000006290	rbm4.1	100	76.777	Poecilia_mexicana
ENSKMAG00000006556	rbm4.1	95	46.348	ENSPREG00000003764	-	95	46.667	Poecilia_reticulata
ENSKMAG00000006556	rbm4.1	100	77.488	ENSPREG00000003724	rbm4.1	100	76.777	Poecilia_reticulata
ENSKMAG00000006556	rbm4.1	100	80.142	ENSPNYG00000004662	rbm4.1	100	80.142	Pundamilia_nyererei
ENSKMAG00000006556	rbm4.1	100	48.565	ENSPNAG00000013057	rbm4.2	100	49.043	Pygocentrus_nattereri
ENSKMAG00000006556	rbm4.1	100	61.268	ENSPNAG00000002539	rbm4.1	100	63.256	Pygocentrus_nattereri
ENSKMAG00000006556	rbm4.1	98	61.483	ENSSFOG00015021996	sf1	97	63.462	Scleropages_formosus
ENSKMAG00000006556	rbm4.1	100	76.777	ENSSMAG00000007571	rbm4.1	100	75.355	Scophthalmus_maximus
ENSKMAG00000006556	rbm4.1	95	51.256	ENSSDUG00000003936	-	99	50.242	Seriola_dumerili
ENSKMAG00000006556	rbm4.1	100	78.014	ENSSDUG00000003925	rbm4.1	100	78.014	Seriola_dumerili
ENSKMAG00000006556	rbm4.1	95	49.747	ENSSLDG00000013157	-	99	50.000	Seriola_lalandi_dorsalis
ENSKMAG00000006556	rbm4.1	100	78.014	ENSSLDG00000013147	rbm4.1	100	78.014	Seriola_lalandi_dorsalis
ENSKMAG00000006556	rbm4.1	100	80.425	ENSSPAG00000019053	rbm4.1	100	81.132	Stegastes_partitus
ENSKMAG00000006556	rbm4.1	95	49.000	ENSSPAG00000019046	-	95	48.120	Stegastes_partitus
ENSKMAG00000006556	rbm4.1	100	71.327	ENSTRUG00000013334	rbm4.1	100	71.327	Takifugu_rubripes
ENSKMAG00000006556	rbm4.1	95	48.371	ENSTRUG00000013328	-	95	46.914	Takifugu_rubripes
ENSKMAG00000006556	rbm4.1	100	80.702	ENSTNIG00000004821	rbm4.1	100	80.702	Tetraodon_nigroviridis
ENSKMAG00000006556	rbm4.1	96	47.264	ENSTNIG00000000316	-	96	46.814	Tetraodon_nigroviridis
ENSKMAG00000006556	rbm4.1	95	66.480	ENSXETG00000026649	rbm4b	94	66.480	Xenopus_tropicalis
ENSKMAG00000006556	rbm4.1	100	77.251	ENSXCOG00000003731	rbm4.1	100	76.540	Xiphophorus_couchianus
ENSKMAG00000006556	rbm4.1	100	77.251	ENSXMAG00000008069	rbm4.1	100	76.540	Xiphophorus_maculatus
ENSKMAG00000006556	rbm4.1	95	71.166	ENSXMAG00000008059	-	95	49.118	Xiphophorus_maculatus